BLASTX nr result

ID: Coptis21_contig00000518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000518
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313488.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-54
ref|XP_002875648.1| harpin-induced family protein [Arabidopsis l...   216   7e-54
ref|NP_190008.1| late embryogenesis abundant hydroxyproline-rich...   216   7e-54
ref|XP_002532541.1| conserved hypothetical protein [Ricinus comm...   209   1e-51
ref|XP_002873250.1| hypothetical protein ARALYDRAFT_908558 [Arab...   208   2e-51

>ref|XP_002313488.1| predicted protein [Populus trichocarpa] gi|222849896|gb|EEE87443.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  219 bits (558), Expect = 1e-54
 Identities = 93/170 (54%), Positives = 130/170 (76%)
 Frame = +2

Query: 302 RPTKPRFTLQDATVYQFNVSQSNYLSSNIQVTISSKNPNDRIGVYYDRLDVYASYRGEQI 481
           +P  PRF LQD T+Y  N+S  N+LSSN+QVTIS+KNPND+IG+YY++LD+YASY  +QI
Sbjct: 44  QPHNPRFILQDTTIYGLNLSDPNFLSSNMQVTISTKNPNDKIGIYYEKLDIYASYHNQQI 103

Query: 482 TIPNSLPPTYQGHNDLNVWSPYITGQNIPIAPYFGLMLAQDQTAGMILLNIKVNGRVRWK 661
           T+   LPPTYQGHND++VWSP++ G  +P++PY  + + QD  AG++L NIK+NG+++WK
Sbjct: 104 TLATELPPTYQGHNDVSVWSPFLYGDAVPVSPYLAVSINQDVNAGVLLFNIKINGKLKWK 163

Query: 662 VGTWTSGKYHLFVNCPAYIQFGIGGKNSASGIGSGYGNKFSLDRDCHTDV 811
           VG+W SG+Y +FVNCPAYI  G    + ++GI  G G K+ + + CH DV
Sbjct: 164 VGSWLSGRYRIFVNCPAYITLG----SRSNGINVGTGIKYQIVQHCHVDV 209


>ref|XP_002875648.1| harpin-induced family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321486|gb|EFH51907.1| harpin-induced family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score =  216 bits (551), Expect = 7e-54
 Identities = 102/169 (60%), Positives = 127/169 (75%)
 Frame = +2

Query: 305 PTKPRFTLQDATVYQFNVSQSNYLSSNIQVTISSKNPNDRIGVYYDRLDVYASYRGEQIT 484
           P  PRF LQDAT+Y FNVSQ NYL+SN+QVT+SS+NPND+IG++YDRLD+YASYR +Q+T
Sbjct: 44  PHGPRFVLQDATIYAFNVSQPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVT 103

Query: 485 IPNSLPPTYQGHNDLNVWSPYITGQNIPIAPYFGLMLAQDQTAGMILLNIKVNGRVRWKV 664
           +   LP TYQGH D+ VWSP++ G  +P+APYF   L+QD TAGM+LLNIK++G VRWKV
Sbjct: 104 LATLLPATYQGHLDVTVWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKV 163

Query: 665 GTWTSGKYHLFVNCPAYIQFGIGGKNSASGIGSGYGNKFSLDRDCHTDV 811
           GTW SG+Y L VNCPAYI   + G  S    G G   K+ L + C  DV
Sbjct: 164 GTWISGRYRLHVNCPAYIT--LAGHFS----GDGPAVKYQLVQRCAVDV 206


>ref|NP_190008.1| late embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana] gi|7649373|emb|CAB88990.1|
           putative protein [Arabidopsis thaliana]
           gi|48310278|gb|AAT41789.1| At3g44220 [Arabidopsis
           thaliana] gi|50198946|gb|AAT70476.1| At3g44220
           [Arabidopsis thaliana] gi|332644356|gb|AEE77877.1| late
           embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana]
          Length = 206

 Score =  216 bits (551), Expect = 7e-54
 Identities = 101/169 (59%), Positives = 127/169 (75%)
 Frame = +2

Query: 305 PTKPRFTLQDATVYQFNVSQSNYLSSNIQVTISSKNPNDRIGVYYDRLDVYASYRGEQIT 484
           P  PRF LQDAT+Y FNVSQ NYL+SN+QVT+SS+NPND+IG++YDRLD+YASYR +Q+T
Sbjct: 44  PHGPRFVLQDATIYAFNVSQPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVT 103

Query: 485 IPNSLPPTYQGHNDLNVWSPYITGQNIPIAPYFGLMLAQDQTAGMILLNIKVNGRVRWKV 664
           +   LP TYQGH D+ +WSP++ G  +P+APYF   L+QD TAGM+LLNIK++G VRWKV
Sbjct: 104 LATLLPATYQGHLDVTIWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKV 163

Query: 665 GTWTSGKYHLFVNCPAYIQFGIGGKNSASGIGSGYGNKFSLDRDCHTDV 811
           GTW SG+Y L VNCPAYI   + G  S    G G   K+ L + C  DV
Sbjct: 164 GTWVSGRYRLHVNCPAYIT--LAGHFS----GDGPAVKYQLVQRCAVDV 206


>ref|XP_002532541.1| conserved hypothetical protein [Ricinus communis]
           gi|223527730|gb|EEF29835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  209 bits (532), Expect = 1e-51
 Identities = 101/197 (51%), Positives = 131/197 (66%), Gaps = 6/197 (3%)
 Frame = +2

Query: 173 MSAKDCGNHGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPTKPRFTLQDATVYQF 352
           MSAKDCGNHG                                 RP+KP+F LQD TV+ F
Sbjct: 1   MSAKDCGNHGH-KRRKLFRRIFAGILIFLFLVLVTILIVWAVLRPSKPKFVLQDVTVFAF 59

Query: 353 NVSQSNYLSSNIQVTISSKNPNDRIGVYYDRLDVYASYRGEQITIPNSLPPTYQGHNDLN 532
           N S  NYL+SN Q+T S++NPND++G+YYD+LDVYA+YR +QIT+ +++P  YQGH ++N
Sbjct: 60  NASTPNYLTSNFQITFSTRNPNDKVGIYYDKLDVYATYRNQQITLRSAIPTNYQGHEEIN 119

Query: 533 VWSPYITGQNIPIAPYFGLMLAQDQTAGMILLNIKVNGRVRWKVGTWTSGKYHLFVNCPA 712
           VWSP I G  +P+APY    LAQDQ AG +L+ IK++GRVR+KVGT+ SG+YHL+V CPA
Sbjct: 120 VWSPNIYGTAVPVAPYNAASLAQDQNAGAVLMMIKMDGRVRFKVGTFVSGRYHLYVKCPA 179

Query: 713 YIQFG------IGGKNS 745
           YIQFG      I G+NS
Sbjct: 180 YIQFGSRTAGIIVGENS 196


>ref|XP_002873250.1| hypothetical protein ARALYDRAFT_908558 [Arabidopsis lyrata subsp.
           lyrata] gi|297319087|gb|EFH49509.1| hypothetical protein
           ARALYDRAFT_908558 [Arabidopsis lyrata subsp. lyrata]
          Length = 215

 Score =  208 bits (529), Expect = 2e-51
 Identities = 100/173 (57%), Positives = 130/173 (75%), Gaps = 3/173 (1%)
 Frame = +2

Query: 302 RPTKPRFTLQDATVYQFNVSQS--NYLSSNIQVTISSKNPNDRIGVYYDRLDVYASYRGE 475
           +P+KPRF LQDATV+ FNVS +  N L+SN Q+T+SS+NPND+IG+YYDRLDVYASYR +
Sbjct: 47  QPSKPRFILQDATVFNFNVSGNPPNLLTSNFQMTLSSRNPNDKIGIYYDRLDVYASYRSQ 106

Query: 476 QITIPNSLPPTYQGHNDLNVWSPYITGQNIPIAPYFGLMLAQDQTAGMILLNIKVNGRVR 655
           QIT P S+P TYQGH ++NVWSP++ G ++P+APY  L L QD T G I+L + ++GRVR
Sbjct: 107 QITFPTSMPTTYQGHKEVNVWSPFVGGYSVPVAPYNALYLDQDHTRGTIMLVLHLDGRVR 166

Query: 656 WKVGTWTSGKYHLFVNCPAYIQFGIGGKNSASGIGSGYGN-KFSLDRDCHTDV 811
           WKVG++ +GKYHL V CPA+I FG    NSASG+  G    K++L   C   V
Sbjct: 167 WKVGSFITGKYHLHVRCPAFINFG----NSASGVIVGNNAVKYTLTTTCSVSV 215


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