BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000514
         (4023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...  1524   0.0  
emb|CBI22072.3| unnamed protein product [Vitis vinifera]             1521   0.0  
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...  1447   0.0  
ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group] g...  1445   0.0  
ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helica...  1425   0.0  

>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
            vinifera]
          Length = 1231

 Score = 1524 bits (3947), Expect = 0.0
 Identities = 774/1119 (69%), Positives = 917/1119 (81%), Gaps = 16/1119 (1%)
 Frame = -1

Query: 4023 NPERAVVHMLCRKRGLVSKSTGKG*QRRVSIYKSKINKLRARKEKKNVTSLDFSEETKEV 3844
            N ERAVVH +CRK G+ SKS+G+G QRRVS+YK+K  K+  +KE+ N   L+FSEE KEV
Sbjct: 50   NHERAVVHEVCRKMGMTSKSSGRGSQRRVSVYKTK-KKVDTKKEEGN-PYLNFSEEAKEV 107

Query: 3843 LRDLFTRYPPSDGEQKEQMLTDHIREVDKKLRKKDDSFYKPSMSKAEIAKEVKALAFRTK 3664
            L DLFTRYPP D E   QM+ +   + +K   KKDD F +PSM+KAEIAK+V+ LA R +
Sbjct: 108  LLDLFTRYPPDDKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIE 167

Query: 3663 NTPKLRKIDEERSKLPIASFREAITSTIETNQVVLISGETGCGKTTQVPQYLLDYMWGKG 3484
              P LR+I E RSKLPIASF++ ITSTIE++QVVLISGETGCGKTTQVPQ++LDYMWGKG
Sbjct: 168  EDPHLRQITEGRSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKG 227

Query: 3483 EACKIICTQPRRISATSVAERISYERGEKVGDSIGYKIRLETKGGKRSSIMFCTNGILLR 3304
            EACKI+CTQPRRISATSVAERIS+E+GE VGDS+GYKIRLE+KGG+ SSI+FCTNGILLR
Sbjct: 228  EACKIVCTQPRRISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLR 287

Query: 3303 VLVGKGTNDSKTASEDISSKESIFGVTHIIVDEIHERDRFSDFILTILRDVLPSHPHLRL 3124
            VLV KGT+  K  +   ++K  I  +THIIVDEIHERDR+SDF+L ILRD+L S+PHLRL
Sbjct: 288  VLVSKGTDRLKPEALRKAAKRDISDITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRL 347

Query: 3123 ILMSATLDAERFSQYFGGCPVIRVPGFTHPVKNFYLEDILSILKSSESNHLDSLSPNDTV 2944
            ILMSAT+DAERFSQYFGGCP+IRVPGFT+PVK FYLED+LSILKS+ +N+LDS   +  V
Sbjct: 348  ILMSATIDAERFSQYFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPV 407

Query: 2943 QGADLTEDYTASLDEAINLAWSSDEFDPLLELVSSEATPRILNYQDSLNGASPLMVFAGK 2764
            +   L EDY  +LDEAINLAWS+DEFDPLL+ VSSE TP++ NYQ S  G +PLMVFAGK
Sbjct: 408  EDPKLIEDYGVALDEAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGK 467

Query: 2763 GNVADVCMLLSLGADCNLCAKDGKTAVEWAQQENQGEVVEVIKRHLQNVVSKSVEEYDLL 2584
            G VADVCM+LS GADC+L A D  TA++ A++EN  E  E+IK+H++N++S SVEE  LL
Sbjct: 468  GRVADVCMMLSFGADCHLKANDDTTALDLAERENHREAAEMIKQHMENLLSNSVEEQQLL 527

Query: 2583 EKYLASVNPEHIDIILIERLLRKICTDSDEGAVLIFLPGWDDINKTRERLLASPFFEDTS 2404
            +KYLA+ NPE ID+ L+E+LLRKIC DS +GA+L+FLPGWDDIN+TRE+LL++ FF+D+S
Sbjct: 528  DKYLATNNPEIIDVALVEQLLRKICNDSKDGAILVFLPGWDDINRTREKLLSASFFKDSS 587

Query: 2403 KFVIISLHSMVPSDEQKKVFKRPPHGSRKIILSTNIAETAVTIDDVVYVIDSGRMKEKSY 2224
            KFV+ISLHSMVPS EQKKVFKRPP G RKI+LSTNI+ETA+TIDDVVYVIDSGRMKEKSY
Sbjct: 588  KFVVISLHSMVPSVEQKKVFKRPPPGCRKIVLSTNISETAITIDDVVYVIDSGRMKEKSY 647

Query: 2223 DPYSNVSTLHSSWVSKASAKQREGRAGRCQPGICYHLYSKTRATSLPEFQVPEIKRMPIE 2044
            DPY+NVSTL S+W+SKASAKQREGRAGRC+PG+CYHLYSK RA SLP+FQVPEIKRMPIE
Sbjct: 648  DPYNNVSTLQSAWISKASAKQREGRAGRCRPGVCYHLYSKLRAASLPDFQVPEIKRMPIE 707

Query: 2043 ELCLQVKLLDPNCRIVDFLQKTLDPPISETIRNAILVLQDIGALSSDEGLTELGEKLGSL 1864
            ELCLQVKLLDPNC+I DFL+KTLDPP+ ETIRNA++VLQDIGALS DE LTELG+KLGSL
Sbjct: 708  ELCLQVKLLDPNCKIEDFLRKTLDPPVFETIRNAVIVLQDIGALSVDEKLTELGKKLGSL 767

Query: 1863 PVHPSTSKMLFFAILMNCLEPALTLACASEYRDPFILPMVPIXXXXXXXXXXXXASLYGG 1684
            PVHP TSKMLFFAIL+NCL+PALTLACAS+YRDPF LPM+P             ASLYGG
Sbjct: 768  PVHPLTSKMLFFAILLNCLDPALTLACASDYRDPFTLPMLPHEKKRATAAKAELASLYGG 827

Query: 1683 HSDQLMVIAAYDCWKRAKDKGQEAQFCSKYFVSSGTMNMLSSMRMQLQRELIQTGFMQED 1504
            HSDQL VIAA++CWK AK+KGQEAQFCS+YFVSSGTM+ML+ MR QLQ ELI+ GF+ ED
Sbjct: 828  HSDQLAVIAAFECWKSAKEKGQEAQFCSQYFVSSGTMHMLAGMRKQLQTELIRNGFIPED 887

Query: 1503 ASQCSLNARDPGILHAVLVAGLYPMVGRLLPPLKSGRRVVVETACGAKVRLHPHSSNFKL 1324
             S CSLNARDPGI+HAVLVAGLYPMVGRLLPP KSG+R VVETA GAKVRLHPHS+NFKL
Sbjct: 888  VSSCSLNARDPGIIHAVLVAGLYPMVGRLLPPHKSGKRSVVETASGAKVRLHPHSNNFKL 947

Query: 1323 SFDQSNSQPLVIYDEITRGDGGMYIRNCSIVGPYPLLIHATEMVVAPA--------XXXX 1168
            SF +S+ +PL+IYDEITRGDGGM+IRNC+++GP PLL+ ATE+VVAP             
Sbjct: 948  SFKKSDGRPLIIYDEITRGDGGMHIRNCTVIGPLPLLLLATEIVVAPGKGNDDDDEDCDD 1007

Query: 1167 XXXXXXXXXXXXXXDGIELNT-VSGKQEERIMSSPDNTVSVVIDRWLKFESTALDVAQIY 991
                          DG E N  ++G+Q E+IMSSPDNTV+VV+DRW  FESTALDVAQIY
Sbjct: 1008 DSDGDDIDEDDSEGDGKEANNKLNGQQGEKIMSSPDNTVAVVVDRWHSFESTALDVAQIY 1067

Query: 990  CLRERLRAAILFKVKYPSKVLPPALGASMYAIACILSYDGLSGISSSLKTIGSLTSMTNA 811
            CLRERL AAI FK  +  +VLPP LGAS+YAIACILSYDGLSGIS SL+++ SLTSM NA
Sbjct: 1068 CLRERLTAAIFFKATHAREVLPPMLGASVYAIACILSYDGLSGISLSLESVDSLTSMVNA 1127

Query: 810  TEPSGTDS-------KPSAFLRSLLSDAPQETTEQKKKK 715
            TE   + S        P+ FL++L+S   +  +  K  K
Sbjct: 1128 TEIDNSASGRRRMGQNPNNFLKTLMSHGTRHKSPSKHHK 1166


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score = 1521 bits (3937), Expect = 0.0
 Identities = 772/1110 (69%), Positives = 912/1110 (82%), Gaps = 7/1110 (0%)
 Frame = -1

Query: 4023 NPERAVVHMLCRKRGLVSKSTGKG*QRRVSIYKSKINKLRARKEKKNVTSLDFSEETKEV 3844
            N ERAVVH +CRK G+ SKS+G+G QRRVS+YK+K  K+  +KE+ N   L+FSEE KEV
Sbjct: 50   NHERAVVHEVCRKMGMTSKSSGRGSQRRVSVYKTK-KKVDTKKEEGN-PYLNFSEEAKEV 107

Query: 3843 LRDLFTRYPPSDGEQKEQMLTDHIREVDKKLRKKDDSFYKPSMSKAEIAKEVKALAFRTK 3664
            L DLFTRYPP D E   QM+ +   + +K   KKDD F +PSM+KAEIAK+V+ LA R +
Sbjct: 108  LLDLFTRYPPDDKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIE 167

Query: 3663 NTPKLRKIDEERSKLPIASFREAITSTIETNQVVLISGETGCGKTTQVPQYLLDYMWGKG 3484
              P LR+I E RSKLPIASF++ ITSTIE++QVVLISGETGCGKTTQVPQ++LDYMWGKG
Sbjct: 168  EDPHLRQITEGRSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKG 227

Query: 3483 EACKIICTQPRRISATSVAERISYERGEKVGDSIGYKIRLETKGGKRSSIMFCTNGILLR 3304
            EACKI+CTQPRRISATSVAERIS+E+GE VGDS+GYKIRLE+KGG+ SSI+FCTNGILLR
Sbjct: 228  EACKIVCTQPRRISATSVAERISFEKGENVGDSVGYKIRLESKGGRHSSIIFCTNGILLR 287

Query: 3303 VLVGKGTNDSKTASEDISSKESIFGVTHIIVDEIHERDRFSDFILTILRDVLPSHPHLRL 3124
            VLV KGT+       DIS       +THIIVDEIHERDR+SDF+L ILRD+L S+PHLRL
Sbjct: 288  VLVSKGTD------RDISD------ITHIIVDEIHERDRYSDFMLAILRDMLASYPHLRL 335

Query: 3123 ILMSATLDAERFSQYFGGCPVIRVPGFTHPVKNFYLEDILSILKSSESNHLDSLSPNDTV 2944
            ILMSAT+DAERFSQYFGGCP+IRVPGFT+PVK FYLED+LSILKS+ +N+LDS   +  V
Sbjct: 336  ILMSATIDAERFSQYFGGCPIIRVPGFTYPVKTFYLEDVLSILKSTGNNNLDSTLLSLPV 395

Query: 2943 QGADLTEDYTASLDEAINLAWSSDEFDPLLELVSSEATPRILNYQDSLNGASPLMVFAGK 2764
            +   L EDY  +LDEAINLAWS+DEFDPLL+ VSSE TP++ NYQ S  G +PLMVFAGK
Sbjct: 396  EDPKLIEDYGVALDEAINLAWSNDEFDPLLDFVSSEGTPQVFNYQHSSTGLTPLMVFAGK 455

Query: 2763 GNVADVCMLLSLGADCNLCAKDGKTAVEWAQQENQGEVVEVIKRHLQNVVSKSVEEYDLL 2584
            G VADVCM+LS GADC+L A D  TA++ A++EN  E  E+IK+H++N++S SVEE  LL
Sbjct: 456  GRVADVCMMLSFGADCHLKANDDTTALDLAERENHREAAEMIKQHMENLLSNSVEEQQLL 515

Query: 2583 EKYLASVNPEHIDIILIERLLRKICTDSDEGAVLIFLPGWDDINKTRERLLASPFFEDTS 2404
            +KYLA+ NPE ID+ L+E+LLRKIC DS +GA+L+FLPGWDDIN+TRE+LL++ FF+D+S
Sbjct: 516  DKYLATNNPEIIDVALVEQLLRKICNDSKDGAILVFLPGWDDINRTREKLLSASFFKDSS 575

Query: 2403 KFVIISLHSMVPSDEQKKVFKRPPHGSRKIILSTNIAETAVTIDDVVYVIDSGRMKEKSY 2224
            KFV+ISLHSMVPS EQKKVFKRPP G RKI+LSTNI+ETA+TIDDVVYVIDSGRMKEKSY
Sbjct: 576  KFVVISLHSMVPSVEQKKVFKRPPPGCRKIVLSTNISETAITIDDVVYVIDSGRMKEKSY 635

Query: 2223 DPYSNVSTLHSSWVSKASAKQREGRAGRCQPGICYHLYSKTRATSLPEFQVPEIKRMPIE 2044
            DPY+NVSTL S+W+SKASAKQREGRAGRC+PG+CYHLYSK RA SLP+FQVPEIKRMPIE
Sbjct: 636  DPYNNVSTLQSAWISKASAKQREGRAGRCRPGVCYHLYSKLRAASLPDFQVPEIKRMPIE 695

Query: 2043 ELCLQVKLLDPNCRIVDFLQKTLDPPISETIRNAILVLQDIGALSSDEGLTELGEKLGSL 1864
            ELCLQVKLLDPNC+I DFL+KTLDPP+ ETIRNA++VLQDIGALS DE LTELG+KLGSL
Sbjct: 696  ELCLQVKLLDPNCKIEDFLRKTLDPPVFETIRNAVIVLQDIGALSVDEKLTELGKKLGSL 755

Query: 1863 PVHPSTSKMLFFAILMNCLEPALTLACASEYRDPFILPMVPIXXXXXXXXXXXXASLYGG 1684
            PVHP TSKMLFFAIL+NCL+PALTLACAS+YRDPF LPM+P             ASLYGG
Sbjct: 756  PVHPLTSKMLFFAILLNCLDPALTLACASDYRDPFTLPMLPHEKKRATAAKAELASLYGG 815

Query: 1683 HSDQLMVIAAYDCWKRAKDKGQEAQFCSKYFVSSGTMNMLSSMRMQLQRELIQTGFMQED 1504
            HSDQL VIAA++CWK AK+KGQEAQFCS+YFVSSGTM+ML+ MR QLQ ELI+ GF+ ED
Sbjct: 816  HSDQLAVIAAFECWKSAKEKGQEAQFCSQYFVSSGTMHMLAGMRKQLQTELIRNGFIPED 875

Query: 1503 ASQCSLNARDPGILHAVLVAGLYPMVGRLLPPLKSGRRVVVETACGAKVRLHPHSSNFKL 1324
             S CSLNARDPGI+HAVLVAGLYPMVGRLLPP KSG+R VVETA GAKVRLHPHS+NFKL
Sbjct: 876  VSSCSLNARDPGIIHAVLVAGLYPMVGRLLPPHKSGKRSVVETASGAKVRLHPHSNNFKL 935

Query: 1323 SFDQSNSQPLVIYDEITRGDGGMYIRNCSIVGPYPLLIHATEMVVAPAXXXXXXXXXXXX 1144
            SF +S+ +PL+IYDEITRGDGGM+IRNC+++GP PLL+ ATE+VVAP             
Sbjct: 936  SFKKSDGRPLIIYDEITRGDGGMHIRNCTVIGPLPLLLLATEIVVAP------------- 982

Query: 1143 XXXXXXDGIELNTVSGKQEERIMSSPDNTVSVVIDRWLKFESTALDVAQIYCLRERLRAA 964
                   G   N ++G+Q E+IMSSPDNTV+VV+DRW  FESTALDVAQIYCLRERL AA
Sbjct: 983  -------GKANNKLNGQQGEKIMSSPDNTVAVVVDRWHSFESTALDVAQIYCLRERLTAA 1035

Query: 963  ILFKVKYPSKVLPPALGASMYAIACILSYDGLSGISSSLKTIGSLTSMTNATEPSGTDS- 787
            I FK  +  +VLPP LGAS+YAIACILSYDGLSGIS SL+++ SLTSM NATE   + S 
Sbjct: 1036 IFFKATHAREVLPPMLGASVYAIACILSYDGLSGISLSLESVDSLTSMVNATEIDNSASG 1095

Query: 786  ------KPSAFLRSLLSDAPQETTEQKKKK 715
                   P+ FL++L+S   +  +  K  K
Sbjct: 1096 RRRMGQNPNNFLKTLMSHGTRHKSPSKHHK 1125


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
            predicted protein [Populus trichocarpa]
          Length = 1195

 Score = 1447 bits (3746), Expect = 0.0
 Identities = 749/1143 (65%), Positives = 895/1143 (78%), Gaps = 14/1143 (1%)
 Frame = -1

Query: 4023 NPERAVVHMLCRKRGLVSKSTGKG*QRRVSIYKSKINKLRARKEKKNVTSLDFSEETKEV 3844
            N +RAVVH +C+K G+ SKS+G+G QRRVS+YK+   KL   K K+N+T L FS E+K V
Sbjct: 48   NYDRAVVHEVCKKMGMKSKSSGRGGQRRVSVYKNT-KKLDDVKGKENLTHLTFSGESKMV 106

Query: 3843 LRDLFTRYPPSDGEQKEQMLTDHIREVDKKLRKKDDSFYKPSMSKAEIAKEVKALAFRTK 3664
            L +LF+ YPP +G    ++   H     K   KKDD F KPS  KAEIAK+V++ A R +
Sbjct: 107  LGELFSNYPPEEGGFGAELEGKHSGTAGKTREKKDDIFSKPSRKKAEIAKKVESFASRIE 166

Query: 3663 NTPKLRKIDEERSKLPIASFREAITSTIETNQVVLISGETGCGKTTQVPQYLLDYMWGKG 3484
               KL++I E RSKLPIASF + ITSTIE++QVVLISGETGCGKTTQVPQ+LLD+MWGKG
Sbjct: 167  KDVKLKQIVEGRSKLPIASFMDVITSTIESHQVVLISGETGCGKTTQVPQFLLDHMWGKG 226

Query: 3483 EACKIICTQPRRISATSVAERISYERGEKVGDSIGYKIRLETKGGKRSSIMFCTNGILLR 3304
            EACKI+CTQPRRISA SV+ERISYERGE VGDS+GYKIRLE+KGGK SSI+FCTNG+LLR
Sbjct: 227  EACKIVCTQPRRISAISVSERISYERGENVGDSVGYKIRLESKGGKHSSIVFCTNGVLLR 286

Query: 3303 VLVGKGTNDSKTASEDISSKESIFGVTHIIVDEIHERDRFSDFILTILRDVLPSHPHLRL 3124
            +LV KG   S+  + + ++KE+         DEIHERDRFSDF+L I+RD+LPSH HLRL
Sbjct: 287  ILVSKGITGSQNEA-NTAAKEN---------DEIHERDRFSDFMLAIIRDILPSHSHLRL 336

Query: 3123 ILMSATLDAERFSQYFGGCPVIRVPGFTHPVKNFYLEDILSILKSSESNHLDSLSPNDTV 2944
            ILMSATLDAERFSQYFGGCP+IRVPGFT+PVK F+LED+LSIL S + NHLDS  PN   
Sbjct: 337  ILMSATLDAERFSQYFGGCPIIRVPGFTYPVKAFHLEDVLSILNSRDDNHLDSAMPNVLD 396

Query: 2943 QGADLTEDYTASLDEAINLAWSSDEFDPLLELVSSEATPRILNYQDSLNGASPLMVFAGK 2764
            +G +LTE+  A+LDEAINLAWS+DEFD LL+LVSSE TP++ +YQ S++G +PLMVFAGK
Sbjct: 397  EGHELTEEDKAALDEAINLAWSNDEFDSLLDLVSSEGTPKVYDYQHSVSGLTPLMVFAGK 456

Query: 2763 GNVADVCMLLSLGADCNLCAKDGKTAVEWAQQENQGEVVEVIKRHLQNVVSKSVEEYDLL 2584
            G V DVCMLLSLGA+CNL +K G TA++WA++ENQ E  EVI++H QN ++ S E+  LL
Sbjct: 457  GRVGDVCMLLSLGANCNLQSKCGLTALKWAERENQEEAAEVIRKHAQNALADSSEQQQLL 516

Query: 2583 EKYLASVNPEHIDIILIERLLRKICTDSDEGAVLIFLPGWDDINKTRERLLASPFFEDTS 2404
            +KY+A++NPE ID++LIE+L++KIC DS +GA+L+FLPGWDDIN+TRERLLA+PFF+D S
Sbjct: 517  DKYMATINPELIDVVLIEQLIKKICVDSKDGAILVFLPGWDDINRTRERLLANPFFKDGS 576

Query: 2403 KFVIISLHSMVPSDEQKKVFKRPPHGSRKIILSTNIAETAVTIDDVVYVIDSGRMKEKSY 2224
            KF+IISLHSMVPS EQKKVFKRPP G RKIILSTNI+E+A+TIDDVVYVIDSGRMKEKSY
Sbjct: 577  KFIIISLHSMVPSVEQKKVFKRPPQGCRKIILSTNISESAITIDDVVYVIDSGRMKEKSY 636

Query: 2223 DPYSNVSTLHSSWVSKASAKQREGRAGRCQPGICYHLYSKTRATSLPEFQVPEIKRMPIE 2044
            DPY+NVSTL SSWVSKASAKQREGRAGRCQPGICYHLYSK R +SLP+FQVPEIKRMPIE
Sbjct: 637  DPYNNVSTLQSSWVSKASAKQREGRAGRCQPGICYHLYSKLRESSLPDFQVPEIKRMPIE 696

Query: 2043 ELCLQVKLLDPNCRIVDFLQKTLDPPISETIRNAILVLQDIGALSSDEGLTELGEKLGSL 1864
            ELCLQVKLLDP+C+I  FLQKTLDPP+ ETIRNA+ VL DIGALS DE LTELGEK+G L
Sbjct: 697  ELCLQVKLLDPHCKIEAFLQKTLDPPVPETIRNAVAVLLDIGALSVDETLTELGEKIGCL 756

Query: 1863 PVHPSTSKMLFFAILMNCLEPALTLACASEYRDPFILPMVPIXXXXXXXXXXXXASLYGG 1684
            PVHP TSKM+FFAILMNCL+PALTLACAS+YRDPF LPM+P             ASLYGG
Sbjct: 757  PVHPLTSKMIFFAILMNCLDPALTLACASDYRDPFTLPMLPNEKKRAAAAKFELASLYGG 816

Query: 1683 HSDQLMVIAAYDCWKRAKDKGQEAQFCSKYFVSSGTMNMLSSMRMQLQRELIQTGFMQED 1504
            HSDQL V+AA++CW  AK++GQEA FCS+YF+SS TMNML +MR QLQRELI+ GF+ E+
Sbjct: 817  HSDQLAVLAAFECWNNAKNRGQEASFCSQYFISSSTMNMLQAMRKQLQRELIRKGFIPEN 876

Query: 1503 ASQCSLNARDPGILHAVLVAGLYPMVGRLLPPLKSGRRVVVETACGAKVRLHPHSSNFKL 1324
             S C+ NA  PGI+HAVLVAGLYPMVGR LPP K+G+R VVET  GAKVRLHP S NFKL
Sbjct: 877  VSSCNTNAHVPGIVHAVLVAGLYPMVGRFLPP-KNGKR-VVETTSGAKVRLHPQSLNFKL 934

Query: 1323 SFDQSNSQPLVIYDEITRGDGGMYIRNCSIVGPYPLLIHATEMVVAPA------XXXXXX 1162
            SF +SN  PLVIYDEITRGDGGM+IRNC+++GP PLL+ ATE+VVAPA            
Sbjct: 935  SFWKSNDYPLVIYDEITRGDGGMHIRNCTVIGPLPLLLLATEIVVAPAENDDEDDEEDDD 994

Query: 1161 XXXXXXXXXXXXDGIELNTVSGKQE-ERIMSSPDNTVSVVIDRWLKFESTALDVAQIYCL 985
                        DG+E++   G Q+ ERIMSSPDN+V VV+DRWL F +TALDVAQIYCL
Sbjct: 995  DYDSADGAESDEDGMEIHGKLGTQQGERIMSSPDNSVMVVVDRWLYFGATALDVAQIYCL 1054

Query: 984  RERLRAAILFKVKYPSKVLPPALGASMYAIACILSYDGLSGISSSLKTIGSLTSMTNATE 805
            RE+L AAILFKV +P K LPPAL A  Y  ACILS DGLSGIS   +++ SLTSM +ATE
Sbjct: 1055 REQLSAAILFKVTHPHKELPPALAAYTYTTACILSNDGLSGISLPGESVESLTSMVHATE 1114

Query: 804  -------PSGTDSKPSAFLRSLLSDAPQETTEQKKKKYAPPETSPHYHKPRQMSRSMHRS 646
                     G    P++FL SL ++  Q              T+P YH  R  ++     
Sbjct: 1115 IDESCSGRRGISQNPNSFLSSLKNNTQQ--------------TAPRYHNARSPNQRPTLQ 1160

Query: 645  GTS 637
            G++
Sbjct: 1161 GST 1163


>ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group]
            gi|53792445|dbj|BAD53353.1| putative DEIH-box RNA/DNA
            helicase [Oryza sativa Japonica Group]
            gi|53793557|dbj|BAD53327.1| putative DEIH-box RNA/DNA
            helicase [Oryza sativa Japonica Group]
            gi|113533893|dbj|BAF06276.1| Os01g0767700 [Oryza sativa
            Japonica Group]
          Length = 1223

 Score = 1445 bits (3741), Expect = 0.0
 Identities = 733/1122 (65%), Positives = 875/1122 (77%), Gaps = 7/1122 (0%)
 Frame = -1

Query: 4017 ERAVVHMLCRKRGLVSKSTGKG*QRRVSIYKSKINKLRARKEKKNVTSLDFSEETKEVLR 3838
            ERA +H +CRK G++SKS+G G +R +S+YK K N+    + ++  + L FS E + VL+
Sbjct: 76   ERAAIHEMCRKMGMISKSSGNGERRCLSVYKRKQNQ--GLETEEGPSHLGFSVEARNVLQ 133

Query: 3837 DLFTRYPPSDGEQKEQMLTDHIREVDKKLRKKDDSFYKPSMSKAEIAKEVKALAFRTKNT 3658
            DLF  YPP D E     + +   +  K   K D +F +P++ K +I K+V+ LA +   +
Sbjct: 134  DLFMHYPPDDAELNGHTVRNSSDKAVKIQWKPDGAFCRPALRKPDILKKVEMLASKVNKS 193

Query: 3657 PKLRKIDEERSKLPIASFREAITSTIETNQVVLISGETGCGKTTQVPQYLLDYMWGKGEA 3478
             +LRKI ++RSKLPI+S+++AI+ST+E +QVVLISGETGCGKTTQVPQY+LD+MWGKGE+
Sbjct: 194  EQLRKIVQDRSKLPISSYKDAISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGES 253

Query: 3477 CKIICTQPRRISATSVAERISYERGEKVGDSIGYKIRLETKGGKRSSIMFCTNGILLRVL 3298
            CKI+CTQPRRISA SVAERIS ERGE VGD++GYKIRLE+KGGK SSIMFCTNG+LLR+L
Sbjct: 254  CKIVCTQPRRISAISVAERISAERGESVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLL 313

Query: 3297 VGKGTNDSKTASEDISSKESIFGVTHIIVDEIHERDRFSDFILTILRDVLPSHPHLRLIL 3118
            +G+ TN SK  ++  S  +++ G+THIIVDEIHERDRFSDF+L ILRD+LP +PHLRL+L
Sbjct: 314  IGRVTNISKEQNQKRSFDDAVTGITHIIVDEIHERDRFSDFMLAILRDLLPLYPHLRLVL 373

Query: 3117 MSATLDAERFSQYFGGCPVIRVPGFTHPVKNFYLEDILSILKSSESNHLDSLSPNDTVQG 2938
            MSAT+DAERFS YF GCP I+VPGFTHPVK FYLED+LSIL+S   NHLD  + +D  Q 
Sbjct: 374  MSATIDAERFSNYFSGCPFIQVPGFTHPVKTFYLEDVLSILQSVGDNHLDPTT-DDLKQS 432

Query: 2937 ADLTEDYTASLDEAINLAWSSDEFDPLLELVSSEATPRILNYQDSLNGASPLMVFAGKGN 2758
            + LT+DY +S+DEAINLA  +DEFDPLLEL+S+E    I NYQ S  G +PLMV AGKG 
Sbjct: 433  SLLTDDYKSSMDEAINLALDNDEFDPLLELISAEQNQEIFNYQHSETGVTPLMVLAGKGQ 492

Query: 2757 VADVCMLLSLGADCNLCAKDGKTAVEWAQQENQGEVVEVIKRHLQNVVSKSVEEYDLLEK 2578
            V D+CMLLS G DC+    DGK+A+ WA+Q NQ EV EVIK+H++   +K  EE +LL K
Sbjct: 493  VGDICMLLSFGVDCSTRDHDGKSALGWAEQGNQQEVCEVIKKHMECGSAKLTEENELLNK 552

Query: 2577 YLASVNPEHIDIILIERLLRKICTDSDEGAVLIFLPGWDDINKTRERLLASPFFEDTSKF 2398
            YLA++NPEHID +LIERLLRKIC DS+EGA+L+FLPGW+DIN+TRERLLASPFF+D+SKF
Sbjct: 553  YLATINPEHIDTVLIERLLRKICVDSNEGAILVFLPGWEDINQTRERLLASPFFQDSSKF 612

Query: 2397 VIISLHSMVPSDEQKKVFKRPPHGSRKIILSTNIAETAVTIDDVVYVIDSGRMKEKSYDP 2218
            +++SLHSM+PS EQKKVFKRPP GSRKIILSTNIAETAVTIDDVV+VIDSGRMKEKSYDP
Sbjct: 613  LVLSLHSMIPSSEQKKVFKRPPAGSRKIILSTNIAETAVTIDDVVFVIDSGRMKEKSYDP 672

Query: 2217 YSNVSTLHSSWVSKASAKQREGRAGRCQPGICYHLYSKTRATSLPEFQVPEIKRMPIEEL 2038
            Y+NVSTLHSSWVSKA+A+QR+GRAGRCQPG CYHLYS+ RA SL E+Q+PEIKRMPIEEL
Sbjct: 673  YNNVSTLHSSWVSKANARQRQGRAGRCQPGTCYHLYSRFRAASLLEYQIPEIKRMPIEEL 732

Query: 2037 CLQVKLLDPNCRIVDFLQKTLDPPISETIRNAILVLQDIGALSSDEGLTELGEKLGSLPV 1858
            CLQVKLLDPNCRI DFL+KTLDPPI ET+RNAI VLQD+GAL+ DE LTELGEKLGSLPV
Sbjct: 733  CLQVKLLDPNCRIADFLRKTLDPPIPETVRNAITVLQDLGALTQDEQLTELGEKLGSLPV 792

Query: 1857 HPSTSKMLFFAILMNCLEPALTLACASEYRDPFILPMVPIXXXXXXXXXXXXASLYGGHS 1678
            HPSTSKML F ILMNCL+PALTLACA++YRDPF+LPM P             ASLYGG+S
Sbjct: 793  HPSTSKMLLFGILMNCLDPALTLACAADYRDPFLLPMAPDERKRAAAAKVELASLYGGYS 852

Query: 1677 DQLMVIAAYDCWKRAKDKGQEAQFCSKYFVSSGTMNMLSSMRMQLQRELIQTGFMQEDAS 1498
            DQL V+AA DCW+RAKD+GQEAQFCSKYFVSS TMNMLS+MR QLQ EL Q GF+  DAS
Sbjct: 853  DQLAVVAAMDCWRRAKDRGQEAQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGFVPVDAS 912

Query: 1497 QCSLNARDPGILHAVLVAGLYPMVGRLLPPLKSGRRVVVETACGAKVRLHPHSSNFKLSF 1318
             CSLNARDPGI+ AVL+AG YPMVGRLLPP K+ RR V+ETA GAKVRLHPHS NF LSF
Sbjct: 913  ACSLNARDPGIIRAVLMAGAYPMVGRLLPPRKNTRRAVIETASGAKVRLHPHSCNFNLSF 972

Query: 1317 DQSNSQPLVIYDEITRGDGGMYIRNCSIVGPYPLLIHATEMVVAPAXXXXXXXXXXXXXX 1138
             +++  PLVIYDEITRGDGGMYI+N S+VG YPL+I ATEMVVAP               
Sbjct: 973  RKTSGNPLVIYDEITRGDGGMYIKNSSVVGSYPLIILATEMVVAPPEDDDSDEEDGDSSE 1032

Query: 1137 XXXXDGIELNTVSGKQEERIMSSPDNTVSVVIDRWLKFESTALDVAQIYCLRERLRAAIL 958
                   E   V+  Q + IMSSPDN+VSVVIDRWL+F++TALDVAQIYCLRERL +AIL
Sbjct: 1033 D------ETEKVTLGQHKEIMSSPDNSVSVVIDRWLRFDATALDVAQIYCLRERLASAIL 1086

Query: 957  FKVKYPSKVLPPALGASMYAIACILSYDGLSGISSSLKTIGSLTSMTNATEPSGTDS--- 787
            FKVK+P  VLPP LGA+MYAIACILSYDGL  + +S     S  S  ++ E S       
Sbjct: 1087 FKVKHPQDVLPPDLGATMYAIACILSYDGLPAMITSDDVATSQGSNQSSAESSRFSQGRR 1146

Query: 786  ----KPSAFLRSLLSDAPQETTEQKKKKYAPPETSPHYHKPR 673
                 P  FL SLLSD P      +K    P   S H    R
Sbjct: 1147 VGYIPPGGFLMSLLSDKPLNAPHFQKSFNHPDGASGHIRSSR 1188


>ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Brachypodium
            distachyon]
          Length = 1272

 Score = 1425 bits (3690), Expect = 0.0
 Identities = 721/1131 (63%), Positives = 880/1131 (77%), Gaps = 7/1131 (0%)
 Frame = -1

Query: 4017 ERAVVHMLCRKRGLVSKSTGKG*QRRVSIYKSKINKLRARKEKKNVTSLDFSEETKEVLR 3838
            ERA +H +CRK G++SKS G   +R +S+YK K  + +   +++  + L FSEE + VL+
Sbjct: 126  ERAAIHEICRKMGMISKSKGYAERRCLSVYKRK--QTQGPDKEEGPSKLGFSEEARNVLQ 183

Query: 3837 DLFTRYPPSDGEQKEQMLTDHIREVDKKLRKKDDSFYKPSMSKAEIAKEVKALAFRTKNT 3658
            DLFT YPP+D E   + + +   +  K   K D +F +P M K +IAK+V+ LA +   +
Sbjct: 184  DLFTHYPPTDAELNGEAVKNSSDKAAKIQWKTDSAFCRPVMHKHDIAKKVEILASKINES 243

Query: 3657 PKLRKIDEERSKLPIASFREAITSTIETNQVVLISGETGCGKTTQVPQYLLDYMWGKGEA 3478
             +LRKI E+RSKLPI+SF++ I+ST+E NQVVLISGETGCGKTTQVPQY+LD++WGKGE+
Sbjct: 244  RQLRKIVEDRSKLPISSFKDHISSTLENNQVVLISGETGCGKTTQVPQYILDHVWGKGES 303

Query: 3477 CKIICTQPRRISATSVAERISYERGEKVGDSIGYKIRLETKGGKRSSIMFCTNGILLRVL 3298
            CKIICTQPRRISA SVAERIS ERGE VGD++GYKIRLE+KGGK SSIMFCTNG+LLR+L
Sbjct: 304  CKIICTQPRRISAISVAERISAERGEVVGDTVGYKIRLESKGGKNSSIMFCTNGVLLRLL 363

Query: 3297 VGKGTNDSKTASEDISSKESIFGVTHIIVDEIHERDRFSDFILTILRDVLPSHPHLRLIL 3118
            +G+ TN  K  +   S  +++ G+THIIVDEIHERDRFSDF+L ILRD+LP +PHL L+L
Sbjct: 364  IGRVTNMPKAKNPKRSFDDAVMGITHIIVDEIHERDRFSDFMLAILRDLLPVYPHLHLVL 423

Query: 3117 MSATLDAERFSQYFGGCPVIRVPGFTHPVKNFYLEDILSILKSSESNHLDSLSPNDTVQG 2938
            MSAT+DAERFSQYF GCP+I+VPG T+PVK FYLED+LSIL+S   NHL+  + +D  Q 
Sbjct: 424  MSATIDAERFSQYFNGCPIIQVPGHTYPVKIFYLEDVLSILQSVGDNHLNPAT-DDLEQD 482

Query: 2937 ADLTEDYTASLDEAINLAWSSDEFDPLLELVSSEATPRILNYQDSLNGASPLMVFAGKGN 2758
            + LT+DY +S+DE+I++A ++DEFDPL+EL+S E +P I NY+ S +G +PLMVFAGKG 
Sbjct: 483  SILTDDYRSSMDESISMALANDEFDPLIELISVEQSPEIFNYRHSESGVTPLMVFAGKGQ 542

Query: 2757 VADVCMLLSLGADCNLCAKDGKTAVEWAQQENQGEVVEVIKRHLQNVVSKSVEEYDLLEK 2578
            + DVCMLLS G DC+    DGK+A++WAQQENQ +V EVIK+H+     KS +E +LL +
Sbjct: 543  IGDVCMLLSFGVDCSARDHDGKSALDWAQQENQQQVYEVIKKHMDCGSVKSPQENELLNR 602

Query: 2577 YLASVNPEHIDIILIERLLRKICTDSDEGAVLIFLPGWDDINKTRERLLASPFFEDTSKF 2398
            YL ++NPEHID +LIERLLRKIC DS+EGAVL+FLPGW+DIN+TRERL ASP F+D+SKF
Sbjct: 603  YLTTINPEHIDTVLIERLLRKICIDSNEGAVLVFLPGWEDINQTRERLFASPLFQDSSKF 662

Query: 2397 VIISLHSMVPSDEQKKVFKRPPHGSRKIILSTNIAETAVTIDDVVYVIDSGRMKEKSYDP 2218
            +I+SLHSM+PS EQKKVFK PP G RKIILSTNIAETAVTIDDVV+VIDSG+MKEKSYDP
Sbjct: 663  LILSLHSMIPSVEQKKVFKSPPVGVRKIILSTNIAETAVTIDDVVFVIDSGKMKEKSYDP 722

Query: 2217 YSNVSTLHSSWVSKASAKQREGRAGRCQPGICYHLYSKTRATSLPEFQVPEIKRMPIEEL 2038
            Y+NVSTLH+SWVS+ASA+QREGRAGRCQPG CYHLYS  RA SLPE+Q+PEIKRMPIEEL
Sbjct: 723  YNNVSTLHTSWVSRASARQREGRAGRCQPGTCYHLYSGFRAASLPEYQIPEIKRMPIEEL 782

Query: 2037 CLQVKLLDPNCRIVDFLQKTLDPPISETIRNAILVLQDIGALSSDEGLTELGEKLGSLPV 1858
            CLQVKLLDPNCRI DFL+KTLDPPI ET++NAI VLQD+GAL+ DE LT+LGEKLGSLPV
Sbjct: 783  CLQVKLLDPNCRIADFLKKTLDPPIPETVKNAITVLQDLGALTQDEQLTDLGEKLGSLPV 842

Query: 1857 HPSTSKMLFFAILMNCLEPALTLACASEYRDPFILPMVPIXXXXXXXXXXXXASLYGGHS 1678
            HPSTSKML F ILMNCL+PALTLACA++YRDPF+LPM P             ASLYGG S
Sbjct: 843  HPSTSKMLLFGILMNCLDPALTLACAADYRDPFVLPMAPDERKKAAAAKVELASLYGGFS 902

Query: 1677 DQLMVIAAYDCWKRAKDKGQEAQFCSKYFVSSGTMNMLSSMRMQLQRELIQTGFMQEDAS 1498
            DQL V+AA+DCW  AKD+GQEA FCSKYFV++ TMNMLS+MR QL  EL Q GF+  DAS
Sbjct: 903  DQLAVVAAFDCWICAKDRGQEALFCSKYFVAANTMNMLSNMRKQLHSELSQRGFLPADAS 962

Query: 1497 QCSLNARDPGILHAVLVAGLYPMVGRLLPPLKSGRRVVVETACGAKVRLHPHSSNFKLSF 1318
             CSLNA+ PGI+ AVLVAG YPMVGRLLPP ++ +R VVETA GAKVRLHPHS NF LSF
Sbjct: 963  ACSLNAKVPGIISAVLVAGAYPMVGRLLPPRRNCKRAVVETASGAKVRLHPHSCNFNLSF 1022

Query: 1317 DQSNSQPLVIYDEITRGDGGMYIRNCSIVGPYPLLIHATEMVVAPAXXXXXXXXXXXXXX 1138
            ++S   PL+IYDEITRGDGGMYI+NCS+VG YPL++ ATEM VAP               
Sbjct: 1023 NKSYGNPLMIYDEITRGDGGMYIKNCSVVGSYPLVLLATEMAVAPPDDSDEEEGSSEDE- 1081

Query: 1137 XXXXDGIELNTVSGKQEERIMSSPDNTVSVVIDRWLKFESTALDVAQIYCLRERLRAAIL 958
                   E NT SG+Q E IMS PDNTVSV+IDRWL+F++TALD+AQIYCLRERL +AIL
Sbjct: 1082 ------AEKNT-SGQQNEEIMSLPDNTVSVIIDRWLRFDATALDIAQIYCLRERLASAIL 1134

Query: 957  FKVKYPSKVLPPALGASMYAIACILSYDGLSGISSSLKTIGSLTSMTNATEPS------- 799
            FKVK+P  VLPPALGA+MYA+ACILSYDGL G+  S     +  S  ++TE S       
Sbjct: 1135 FKVKHPQDVLPPALGATMYAVACILSYDGLPGMVESADLSTNRGSNQSSTEASRFTQGRR 1194

Query: 798  GTDSKPSAFLRSLLSDAPQETTEQKKKKYAPPETSPHYHKPRQMSRSMHRS 646
             +   P  FL SLLSD P    + +K  + P   S H    R  +   ++S
Sbjct: 1195 ASYIPPGGFLMSLLSDIPPNAPQFRKSSHHPGGASGHIRPSRPSAGRFNQS 1245