BLASTX nr result
ID: Coptis21_contig00000512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000512
(233 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40... 152 2e-35
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 152 2e-35
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 152 2e-35
gb|ABD61727.1| polyubiquitin [Lupinus albus] 152 2e-35
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 152 2e-35
>ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40S ribosomal protein
S27a-like [Cucumis sativus]
Length = 228
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 64 ESTLHLVLRLRGGMQIF 80
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 131 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 190
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 191 ESTLHLVLRLRGGMQIF 207
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 207 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 266
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 267 ESTLHLVLRLRGGMQIF 283
Score = 145 bits (365), Expect = 4e-33
Identities = 73/73 (100%), Positives = 73/73 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 283 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 342
Query: 53 ESTLHLVLRLRGG 15
ESTLHLVLRLRGG
Sbjct: 343 ESTLHLVLRLRGG 355
Score = 129 bits (323), Expect = 3e-28
Identities = 77/128 (60%), Positives = 77/128 (60%), Gaps = 51/128 (39%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---------------------------- 138
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEG
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTFRVKSRRLKFCLLALLDSATTIESSLA 63
Query: 137 -----------------------IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 27
IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 64 LRSKKSSERREREKESALSRARGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 123
Query: 26 LRGGMQIF 3
LRGGMQIF
Sbjct: 124 LRGGMQIF 131
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1|
Ubiquitin [Medicago truncatula]
Length = 533
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 63
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 64 ESTLHLVLRLRGGMQIF 80
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 139
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 140 ESTLHLVLRLRGGMQIF 156
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 156 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 216 ESTLHLVLRLRGGMQIF 232
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 232 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 292 ESTLHLVLRLRGGMQIF 308
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 384 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 443
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 444 ESTLHLVLRLRGGMQIF 460
Score = 149 bits (375), Expect = 3e-34
Identities = 75/77 (97%), Positives = 76/77 (98%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQK
Sbjct: 308 FVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 367
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 368 ESTLHLVLRLRGGMQIF 384
Score = 145 bits (365), Expect = 4e-33
Identities = 73/73 (100%), Positives = 73/73 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 460 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 519
Query: 53 ESTLHLVLRLRGG 15
ESTLHLVLRLRGG
Sbjct: 520 ESTLHLVLRLRGG 532
>gb|ABD61727.1| polyubiquitin [Lupinus albus]
Length = 132
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 38 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 97
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 98 ESTLHLVLRLRGGMQIF 114
Score = 77.8 bits (190), Expect = 9e-13
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -1
Query: 116 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 3
LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF
Sbjct: 1 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 38
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 40 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 99
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 100 ESTLHLVLRLRGGMQIF 116
Score = 152 bits (385), Expect = 2e-35
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 116 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 175
Query: 53 ESTLHLVLRLRGGMQIF 3
ESTLHLVLRLRGGMQIF
Sbjct: 176 ESTLHLVLRLRGGMQIF 192
Score = 143 bits (361), Expect = 1e-32
Identities = 72/73 (98%), Positives = 72/73 (98%)
Frame = -1
Query: 233 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 54
FVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK
Sbjct: 192 FVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 251
Query: 53 ESTLHLVLRLRGG 15
ESTLHLVLRLRGG
Sbjct: 252 ESTLHLVLRLRGG 264
Score = 81.6 bits (200), Expect = 6e-14
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = -1
Query: 122 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 3
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF
Sbjct: 1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 40