BLASTX nr result
ID: Coptis21_contig00000502
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000502 (2581 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 712 0.0 ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 696 0.0 ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2... 681 0.0 emb|CBI28414.3| unnamed protein product [Vitis vinifera] 621 e-175 ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu... 570 e-160 >ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis] gi|223525472|gb|EEF28048.1| RNA binding protein, putative [Ricinus communis] Length = 578 Score = 712 bits (1838), Expect = 0.0 Identities = 365/601 (60%), Positives = 435/601 (72%), Gaps = 2/601 (0%) Frame = +2 Query: 314 MDFTEATKTVYDRIQTLEPDHVSKIIGYLLLQDNGERDMIRLAFGPDISIQSLITQAKLE 493 MDFTE+TK VY+RIQ LEP++VSKIIGYLLLQD+ ER+MIRLAF PD I SLIT+AK + Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60 Query: 494 LGLSPKPGISAPIPPASMNPAPTSDLPLQFTXXXXXXXXXXXXXX-TLRVAPPYWDPLVM 670 LGL+ KP +SAPI P+ +N +P SD+PLQFT + R A YWD V Sbjct: 61 LGLN-KPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVT 119 Query: 671 VDQQPLHNMDFISPAYSDTVSDDYRFHNQAQFLSLEDQLDAVNHSGHDFSSNFFYPDGTL 850 DQQ + N+DF SP YSDTV +DYR N QFL+L+DQ + + DFSSN+FY + L Sbjct: 120 GDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPAL 179 Query: 851 GNMSARTSRRSPSLPEFPVKACHYFNKGFCKHGSNCRYFHGQPVPDSFSQIFSPNSNDLI 1030 G RT+RRSPSLPEFP+K CHYF+KG+CKHG+NCRY HG P+P+ FSQIFS SND Sbjct: 180 G---PRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFS 236 Query: 1031 TDDHFL-PGSXXXXXXXXXXXXXSRRGCPVSIASLPLLYQEKYGRTLQAEGYLTESQRHG 1207 D+H + PGS SRRG PVSIASLP++Y EKYG+TLQAEGYLTESQRHG Sbjct: 237 NDEHVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHG 296 Query: 1208 KAGYSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRYMEYRNDRSDPGGVVAGSRQIYL 1387 KAGYSLTKLLARLKNSIR+IDRPHGQH+V+L ED P+Y+EY +R+DPGG+VAGSRQIYL Sbjct: 297 KAGYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYL 356 Query: 1388 TFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKIILTKGNPHFVC 1567 TFPAES FTE DVS YF FGPVQDVRIPCQQKRMFGFVTF++ ETVK IL KGNPH+VC Sbjct: 357 TFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVC 416 Query: 1568 GARVLVKPYREKSRLVDRKYNEKSDSPLYYPSNFLDMDPEMQIAPRLCDTSRLLRKQFME 1747 GARVLVKPYREKSRL+DRK++EK P+Y S+F+D D E+ P + D SRLLRKQ ME Sbjct: 417 GARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPMPTISDNSRLLRKQLME 476 Query: 1748 DHXXXXXXXXXXXXXXXXGHRPLAHQPYFGYSMDDLKVSDXXXXXXXXXXXXXXXAHRDQ 1927 ++ G + L HQ Y G SMD+LK+S+ + Sbjct: 477 ENEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSE------------------EH 518 Query: 1928 SEFTSRDRFNYLFDVFNNGSTSDDKGRHSNSNNYGDQESQGLNLPESPFASPMGSSISTV 2107 +EF S +RFNYL DV NNGS+S+ K R S NY DQ+SQG+NLPESPFASP+ S ISTV Sbjct: 519 AEFPSAERFNYLLDVLNNGSSSEGKFRRI-STNYNDQDSQGINLPESPFASPIRSGISTV 577 Query: 2108 I 2110 + Sbjct: 578 M 578 >ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis vinifera] Length = 572 Score = 696 bits (1797), Expect = 0.0 Identities = 366/604 (60%), Positives = 433/604 (71%), Gaps = 6/604 (0%) Frame = +2 Query: 314 MDFTEATKTVYDRIQTLEPDHVSKIIGYLLLQDNGERDMIRLAFGPDISIQSLITQAKLE 493 MDF+E+TK VY+RIQ LEP++VSKIIGYLLLQD+GERDMIR AF D +IQ LI +AK E Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60 Query: 494 LGLSPKPGISAPIPPASMNPAPTSDLPLQFTXXXXXXXXXXXXXXTLRVAPPYWDPLVMV 673 LGLS KP +S+PI P +NP+P SDLPLQFT R YWDP V Sbjct: 61 LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSP---RPGNSYWDPQVNG 117 Query: 674 DQQPLHNM-DFISPAYSDTVSDDYRFHNQAQFLSLEDQLDAVNHSGHDFSSNFFYPDGTL 850 DQQ +H + DF+ YSD++ DD+R +Q FL++EDQL+ N G +FS +++Y + L Sbjct: 118 DQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLE--NSVGSEFSGSYYYAEQAL 175 Query: 851 GNMSARTSRRSPSLPEFPVKACHYFNKGFCKHGSNCRYFHGQPVPDSFSQIFSPNSNDLI 1030 + R SRRSPSLPEFP+K CHYFNKGFCKHG++CRYFHG P+ +SFSQIFSP +N+L Sbjct: 176 ---NTRISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELP 232 Query: 1031 TDDH-FLPGSXXXXXXXXXXXXXSRRGCPVSIASLPLLYQEKYGRTLQAEGYLTESQRHG 1207 DDH F PGS SRRGCPVSIASLP++Y EKYGRTLQAEGYLTESQRHG Sbjct: 233 NDDHVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHG 292 Query: 1208 KAGYSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRYMEYRNDRSDPGGVVAGSRQIYL 1387 KAGYSLTKLLARLKNSIRLIDRPHGQH+V+LAED P+YME +RSDPG +V S+QIYL Sbjct: 293 KAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYL 352 Query: 1388 TFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKIILTKGNPHFVC 1567 TFPA+STFTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTF++ ETVK ILTKGNPH++C Sbjct: 353 TFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYIC 412 Query: 1568 GARVLVKPYREK--SRLVDRKYNEKSDSPLYYPSNFLDMDPEMQIAPRLCDTSRLLRK-Q 1738 GARVLVKPYREK SR VDR+ + P+YY +F+D D E+Q PR+CD SRLLRK Q Sbjct: 413 GARVLVKPYREKASSRTVDRRQH-----PMYYSPHFIDEDSELQSIPRVCDNSRLLRKQQ 467 Query: 1739 FMEDHXXXXXXXXXXXXXXXXGHRPLAHQPYFGYSMDDLKVSDXXXXXXXXXXXXXXXAH 1918 ME+H P PYFGYSMD+ K AH Sbjct: 468 LMEEHEQALELERRRLSELQL--TPKTAHPYFGYSMDEFK-------------QHSDAAH 512 Query: 1919 RDQSEFTSRDRFNYLFDVFNNGSTSDDKGRHSNSNNYGDQE-SQGLNLPESPFASPMGSS 2095 +Q+EF S +R NYL +V NNGSTS+D+ S NY +QE SQGLNLPESPFASP+ +S Sbjct: 513 AEQAEFPSAERLNYLLEVLNNGSTSEDR-----STNYNEQESSQGLNLPESPFASPIRNS 567 Query: 2096 ISTV 2107 ISTV Sbjct: 568 ISTV 571 >ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1| predicted protein [Populus trichocarpa] Length = 554 Score = 681 bits (1757), Expect = 0.0 Identities = 350/600 (58%), Positives = 416/600 (69%), Gaps = 1/600 (0%) Frame = +2 Query: 314 MDFTEATKTVYDRIQTLEPDHVSKIIGYLLLQDNGERDMIRLAFGPDISIQSLITQAKLE 493 MDF+E+TK VY+RIQ +EP+ V KIIGY+LLQ++GER+MIRLAF PD I + I++AK + Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60 Query: 494 LGLSPKPGISAPIPPASMNPAPTSDLPLQFTXXXXXXXXXXXXXXTLRVAPPYWDPLVMV 673 LGL+ P + PI P+ +NPAP SD+ LQF +R A +WD V Sbjct: 61 LGLNKTP-VPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGSFWDAQVT- 118 Query: 674 DQQPLHNMDFISPAYSDTVSDDYRFHNQAQFLSLEDQLDAVNHSGHDFSSNFFYPDGTLG 853 DYR NQ QFL+ +DQL+ VN DFSS++FYP+ LG Sbjct: 119 ---------------------DYRLQNQMQFLTSDDQLEFVNS---DFSSSYFYPEPALG 154 Query: 854 NMSARTSRRSPSLPEFPVKACHYFNKGFCKHGSNCRYFHGQPVPDSFSQIFSPNSNDLIT 1033 RTSRRSPSLPEFPVK CHYFNKGFCKHG+NCRYFHG P+P+SFSQI S NSN++ Sbjct: 155 ---PRTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIAN 211 Query: 1034 DDHFL-PGSXXXXXXXXXXXXXSRRGCPVSIASLPLLYQEKYGRTLQAEGYLTESQRHGK 1210 D+HF+ PGS SRRG PVSIASLP++Y EKYGR LQAEGYLTESQRHGK Sbjct: 212 DEHFISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGK 271 Query: 1211 AGYSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRYMEYRNDRSDPGGVVAGSRQIYLT 1390 AGYSLTKLLARLKNSIRLIDRPHGQH+V+L ED P+Y+EY +R+DPGG+VAGSRQIYLT Sbjct: 272 AGYSLTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLT 331 Query: 1391 FPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKIILTKGNPHFVCG 1570 FPAESTFTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTF++ ETVK IL+KGNPH VCG Sbjct: 332 FPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCG 391 Query: 1571 ARVLVKPYREKSRLVDRKYNEKSDSPLYYPSNFLDMDPEMQIAPRLCDTSRLLRKQFMED 1750 ARVLVKPYREKSRLVDRKY EK P +Y +F+D D E+ PR+CD SRLLRKQ ME+ Sbjct: 392 ARVLVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSELHSVPRVCDNSRLLRKQLMEE 451 Query: 1751 HXXXXXXXXXXXXXXXXGHRPLAHQPYFGYSMDDLKVSDXXXXXXXXXXXXXXXAHRDQS 1930 H +PLA Y G+SMD+ K+S+ Sbjct: 452 HEQALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSE-----------------EQAD 494 Query: 1931 EFTSRDRFNYLFDVFNNGSTSDDKGRHSNSNNYGDQESQGLNLPESPFASPMGSSISTVI 2110 +F S + FNY FDV NNGSTS++K RH+ +N +QG+NLPESPFAS +G ISTVI Sbjct: 495 QFPSAEHFNYWFDVLNNGSTSEEKHRHTRTNCSEQDSNQGVNLPESPFASAIGKGISTVI 554 >emb|CBI28414.3| unnamed protein product [Vitis vinifera] Length = 525 Score = 621 bits (1602), Expect = e-175 Identities = 344/612 (56%), Positives = 405/612 (66%), Gaps = 5/612 (0%) Frame = +2 Query: 287 PLTPGNQCKMDFTEATKTVYDRIQTLEPDHVSKIIGYLLLQDNGERDMIRLAFGPDISIQ 466 PL MDF+E+TK VY+RIQ LEP++VSKIIGYLLLQD+GERDMIR AF D +IQ Sbjct: 5 PLFSWVDTDMDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQ 64 Query: 467 SLITQAKLELGLSPKPGISAPIPPASMNPAPTSDLPLQFTXXXXXXXXXXXXXXTLRVAP 646 LI +AK ELGLS KP +S+PI +P Sbjct: 65 CLINKAKAELGLSSKPAVSSPI------------------------------------SP 88 Query: 647 PYWDPLVMVDQQPLHNMDFISPAYSDTVSDDYRFHNQAQFLSLEDQLDAVNHSGHDFSSN 826 P +P SP+ S Q FL++EDQL+ N G +FS + Sbjct: 89 PQVNP---------------SPSMS-----------QIHFLAMEDQLE--NSVGSEFSGS 120 Query: 827 FFYPDGTLGNMSARTSRRSPSLPEFPVKACHYFNKGFCKHGSNCRYFHGQPVPDSFSQIF 1006 ++Y + L + R SRRSPSLPEFP+K CHYFNKGFCKHG++CRYFHG P+ +SFSQIF Sbjct: 121 YYYAEQAL---NTRISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIF 177 Query: 1007 SPNSNDLITDDH-FLPGSXXXXXXXXXXXXXSRRGCPVSIASLPLLYQEKYGRTLQAEGY 1183 SP +N+L DDH F PGS SRRGCPVSIASLP++Y EKYGRTLQAEGY Sbjct: 178 SPGANELPNDDHVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGY 237 Query: 1184 LTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRYMEYRNDRSDPGGVV 1363 LTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQH+V+LAED P+YME +RSDPG +V Sbjct: 238 LTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIV 297 Query: 1364 AGSRQIYLTFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKIILT 1543 S+QIYLTFPA+STFTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTF++ ETVK ILT Sbjct: 298 GSSKQIYLTFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILT 357 Query: 1544 KGNPHFVCGARVLVKPYREK--SRLVDRKYNEKSDSPLYYPSNFLDMDPEMQIAPRLCDT 1717 KGNPH++CGARVLVKPYREK SR VDR+ + P+YY +F+D D E+Q PR+CD Sbjct: 358 KGNPHYICGARVLVKPYREKASSRTVDRRQH-----PMYYSPHFIDEDSELQSIPRVCDN 412 Query: 1718 SRLLRK-QFMEDHXXXXXXXXXXXXXXXXGHRPLAHQPYFGYSMDDLKVSDXXXXXXXXX 1894 SRLLRK Q ME+H P PYFGYSMD+ K Sbjct: 413 SRLLRKQQLMEEHEQALELERRRLSELQL--TPKTAHPYFGYSMDEFK------------ 458 Query: 1895 XXXXXXAHRDQSEFTSRDRFNYLFDVFNNGSTSDDKGRHSNSNNYGDQE-SQGLNLPESP 2071 AH +Q+EF S +R NYL +V NNGSTS+D+ S NY +QE SQGLNLPESP Sbjct: 459 -QHSDAAHAEQAEFPSAERLNYLLEVLNNGSTSEDR-----STNYNEQESSQGLNLPESP 512 Query: 2072 FASPMGSSISTV 2107 FASP+ +SISTV Sbjct: 513 FASPIRNSISTV 524 >ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis] gi|223531534|gb|EEF33365.1| RNA binding protein, putative [Ricinus communis] Length = 551 Score = 570 bits (1468), Expect = e-160 Identities = 312/601 (51%), Positives = 380/601 (63%), Gaps = 2/601 (0%) Frame = +2 Query: 314 MDFTEATKTVYDRIQTLEPDHVSKIIGYLLLQDNGERDMIRLAFGPDISIQSLITQAKLE 493 MDF+E T+ V+++I+ +EP++V+KIIGYLLLQD +++MI LA PD+ IQ +I +AK E Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60 Query: 494 LGLSPKPGISAPIPPASMNPAPTSDLPLQFTXXXXXXXXXXXXXXTLRVAPPYWDPLVMV 673 L + P+ P+ +P S+ QF RV YW+ V Sbjct: 61 LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVPSTYWESQVAS 120 Query: 674 DQQPLHNMDFISPAYSDTVSDDYRFHNQAQFLSLEDQLDAVNHSGHDFSSNFFYPDGTLG 853 H+ DF+ Y D++++ NQAQFLSLEDQL++VN F S+ FY D LG Sbjct: 121 K----HSSDFVPMTYQDSMTE---LQNQAQFLSLEDQLESVNLGNAGFPSDLFYSDAALG 173 Query: 854 NMSARTSRRSPSLPEFPVKACHYFNKGFCKHGSNCRYFHGQPVPDSFSQIFSPNSNDLIT 1033 + AR RR SL E +K CHYFNKG+CKHGSNCRYFHGQ + DSF + F + D I Sbjct: 174 SFRARAGRRYSSLNENSMKICHYFNKGYCKHGSNCRYFHGQ-ISDSFPRTFDAINEDQI- 231 Query: 1034 DDHFLPGSXXXXXXXXXXXXXSRRGCPVSIASLPLLYQEKYGRTLQAEGYLTESQRHGKA 1213 F PGS SR+G PVSIASLP+LY EKYG+ LQA+GYLTESQRHGKA Sbjct: 232 ---FSPGSLEKLELEIIELLKSRKGNPVSIASLPMLYYEKYGKVLQADGYLTESQRHGKA 288 Query: 1214 GYSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRYMEYRNDRSDPGGVVAGSRQIYLTF 1393 GYSLTKLLARLKNSIRLIDRPHGQHAV+LAED P+YME R DR+DPG +V+GSRQIYLTF Sbjct: 289 GYSLTKLLARLKNSIRLIDRPHGQHAVILAEDVPKYMENRGDRNDPGPIVSGSRQIYLTF 348 Query: 1394 PAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKIILTKGNPHFVCGA 1573 PAESTFTE+DVSNYF FGPV+DVRIPCQQKRMFGFVTF +TVKIIL KGNPHFVC A Sbjct: 349 PAESTFTEDDVSNYFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKIILAKGNPHFVCNA 408 Query: 1574 RVLVKPYREKSRLVDRKYNEKSDSPLYYPSNFLDMDPEMQIAPRLCDTSRLLRKQFMEDH 1753 RVLVKPYRE L+ Y+ S+++DMD E+ R +TSRLLRKQ +E+ Sbjct: 409 RVLVKPYRENQSLL-----------XYFSSHYVDMDAELHSMSRGYETSRLLRKQLLEEQ 457 Query: 1754 XXXXXXXXXXXXXXXXGHRPLAHQPYFGYSMDDLKVSDXXXXXXXXXXXXXXXAHRDQSE 1933 +P++H YF Y MD KVS+ Sbjct: 458 EQALELERRQRLAELRIRKPVSHHSYFDYPMDGFKVSE---------------------- 495 Query: 1934 FTSRDRFNYLFDV--FNNGSTSDDKGRHSNSNNYGDQESQGLNLPESPFASPMGSSISTV 2107 D F + V F NGS +DDK RH + NY DQ+SQGLNLPESPFAS + SSIST+ Sbjct: 496 ----DNFELPYHVLDFINGSGNDDKIRHIET-NYADQDSQGLNLPESPFASAIPSSISTI 550 Query: 2108 I 2110 I Sbjct: 551 I 551