BLASTX nr result

ID: Coptis21_contig00000501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000501
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-...    99   8e-19
ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease ...    96   5e-18
emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]    95   2e-17
gb|EAY75746.1| hypothetical protein OsI_03659 [Oryza sativa Indi...    95   2e-17
ref|NP_001044181.2| Os01g0737600 [Oryza sativa Japonica Group] g...    95   2e-17

>ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
           gi|449506025|ref|XP_004162631.1| PREDICTED: Werner
           Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 210

 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
 Frame = -1

Query: 296 MSTL-IQDLDISSETHSTYRVQIDTKIIHTTVTSTPSIVDQYVNDLLYTHRSRLNRLVVG 120
           M+TL I D  I   +H  Y +  D   I T VT++PS+VD +++++L  HR RL+RLVVG
Sbjct: 1   MATLTISDRQIPLNSHDYYDITFDDDEILTLVTASPSMVDMWISEILRIHRRRLHRLVVG 60

Query: 119 LDIEWRPPSYGNSQNPVATLQLCVGHKCLIFQFLY 15
           LD+EWRP    + +NPVATLQLCVG +CLIFQ ++
Sbjct: 61  LDVEWRPNFDRHFRNPVATLQLCVGRRCLIFQLIH 95


>ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease [Vitis vinifera]
          Length = 213

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -1

Query: 296 MSTLIQDLDISSETHSTYRVQIDTKIIHTTVTSTPSIVDQYVNDLLYTH-RSRLNRLVVG 120
           M+  I  LD+SSETH+ Y V      + T VT+TP+IVD ++ ++  ++  + L+RL+VG
Sbjct: 1   MTVSITALDLSSETHALYEVIFFGDSVQTLVTNTPNIVDSWIQNVESSNPHNGLDRLIVG 60

Query: 119 LDIEWRPPSYGNSQNPVATLQLCVGHKCLIFQFLYMPHV 3
           LD+EWRP      +NPVATLQLCVG  CLIFQ L+ P +
Sbjct: 61  LDVEWRPSFNPQIENPVATLQLCVGRSCLIFQLLHAPAI 99


>emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
          Length = 208

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 44/86 (51%), Positives = 57/86 (66%)
 Frame = -1

Query: 260 ETHSTYRVQIDTKIIHTTVTSTPSIVDQYVNDLLYTHRSRLNRLVVGLDIEWRPPSYGNS 81
           +TH  +RV      I T VT  P +VD ++ D+ + HR RL++L+VGLDIEWR P+    
Sbjct: 10  QTHELFRVAFHDDCIETLVTHVPHMVDSWIGDIEHIHRHRLHKLIVGLDIEWR-PNNARY 68

Query: 80  QNPVATLQLCVGHKCLIFQFLYMPHV 3
            NPVA LQLCVG +CLIFQ LY P +
Sbjct: 69  TNPVAILQLCVGRRCLIFQLLYAPEI 94


>gb|EAY75746.1| hypothetical protein OsI_03659 [Oryza sativa Indica Group]
          Length = 208

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 44/82 (53%), Positives = 57/82 (69%)
 Frame = -1

Query: 248 TYRVQIDTKIIHTTVTSTPSIVDQYVNDLLYTHRSRLNRLVVGLDIEWRPPSYGNSQNPV 69
           TY V  D   IHTTVT +   VD +++++L  HR RLN LVVGLD+EWRP +Y +   PV
Sbjct: 13  TYTVAFDEDYIHTTVTYSGDDVDDWLDEILRIHRRRLNYLVVGLDVEWRPATYYHGPGPV 72

Query: 68  ATLQLCVGHKCLIFQFLYMPHV 3
           A LQ+CVG +CLIFQ L+  +V
Sbjct: 73  AVLQICVGRRCLIFQILHADYV 94


>ref|NP_001044181.2| Os01g0737600 [Oryza sativa Japonica Group]
           gi|57900569|dbj|BAD87021.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|125571949|gb|EAZ13464.1|
           hypothetical protein OsJ_03381 [Oryza sativa Japonica
           Group] gi|255673665|dbj|BAF06095.2| Os01g0737600 [Oryza
           sativa Japonica Group]
          Length = 208

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 44/82 (53%), Positives = 57/82 (69%)
 Frame = -1

Query: 248 TYRVQIDTKIIHTTVTSTPSIVDQYVNDLLYTHRSRLNRLVVGLDIEWRPPSYGNSQNPV 69
           TY V  D   IHTTVT +   VD +++++L  HR RLN LVVGLD+EWRP +Y +   PV
Sbjct: 13  TYTVAFDEDYIHTTVTYSGDDVDDWLDEILRIHRRRLNYLVVGLDVEWRPATYYHGPGPV 72

Query: 68  ATLQLCVGHKCLIFQFLYMPHV 3
           A LQ+CVG +CLIFQ L+  +V
Sbjct: 73  AVLQICVGRRCLIFQILHADYV 94


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