BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000480
         (1471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, pu...   362   1e-97
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  361   3e-97
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   354   3e-95
ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni...   348   2e-93
gb|ACN41131.1| unknown [Picea sitchensis]                             339   9e-91

>ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 313

 Score =  362 bits (930), Expect = 1e-97
 Identities = 191/316 (60%), Positives = 210/316 (66%), Gaps = 2/316 (0%)
 Frame = -3

Query: 1430 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 1251
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTP 60

Query: 1250 GMDPQGQA--MDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFRE 1077
            G+DPQ Q+  +DPR+IQ             LSKYG+IESLNICDNLADHMVGNVYVQFRE
Sbjct: 61   GVDPQAQSQSLDPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHMVGNVYVQFRE 120

Query: 1076 EEHAAAAVQSLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISX 897
            E+HAA A+++L GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS 
Sbjct: 121  EDHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 180

Query: 896  XXXXXXXXXXXXXXXXXXXXSPHKNRNYEERPXXXXXXXXXXXXXXXXXDNRVXXXXXXX 717
                                SP ++R Y+ERP                   R        
Sbjct: 181  ELRRRLFGRNRRRRSRSRSHSPSRHRGYDERP-HGGRGFGRRDDDRAHHHERGRRPRSRS 239

Query: 716  XXXXXXXXXXXXXXXXXSPPARDGSAERRARIEQWNREKEQAESGNKNNDKHPSSDDYEK 537
                             SPP R+ SAERRA+IEQWNRE+EQ ESGN+  D     +D   
Sbjct: 240  PGRRGGRSRSPAGRRNRSPPVRESSAERRAKIEQWNREREQTESGNR--DGQNLDNDRNS 297

Query: 536  NGYSPNGEQYYDQNHH 489
            NG + NG  Y D  HH
Sbjct: 298  NGDAKNGGHYDDDQHH 313


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  361 bits (926), Expect = 3e-97
 Identities = 186/310 (60%), Positives = 206/310 (66%)
 Frame = -3

Query: 1430 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 1251
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDM+TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 1250 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1071
            G+DPQGQ +DPR+IQ             LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1070 HAAAAVQSLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISXXX 891
            HA  A+++L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS   
Sbjct: 121  HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 890  XXXXXXXXXXXXXXXXXXSPHKNRNYEERPXXXXXXXXXXXXXXXXXDNRVXXXXXXXXX 711
                              SP  +R + +RP                  ++          
Sbjct: 181  RRQLFGRYRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRNQRYHDK--GRRPRSRS 238

Query: 710  XXXXXXXXXXXXXXXSPPARDGSAERRARIEQWNREKEQAESGNKNNDKHPSSDDYEKNG 531
                             P R+ S ERRA+I QWNREKEQA++G  NND +    D   NG
Sbjct: 239  PGHRGRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQADTG--NNDVNHDVTDNHANG 296

Query: 530  YSPNGEQYYD 501
            +  NGE YYD
Sbjct: 297  FQDNGEDYYD 306


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis vinifera]
          Length = 343

 Score =  354 bits (909), Expect = 3e-95
 Identities = 193/348 (55%), Positives = 214/348 (61%), Gaps = 18/348 (5%)
 Frame = -3

Query: 1430 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 1251
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 1250 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1071
            G+DPQGQ +DPR+IQ             LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1070 HAAAAVQSLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISXXX 891
            HAA A+++L GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS   
Sbjct: 121  HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180

Query: 890  XXXXXXXXXXXXXXXXXXSPHKNRNYEERPXXXXXXXXXXXXXXXXXDNRVXXXXXXXXX 711
                              SP+++R +EE P                              
Sbjct: 181  RRQLFGRNRRRRSRSRSRSPYRHRGHEEHPHGPHGPHGPHGPHGPRGPR---GSNRRDDD 237

Query: 710  XXXXXXXXXXXXXXXSPPARDGSAER------------------RARIEQWNREKEQAES 585
                             PAR G   R                  RA+IEQWNRE+EQAE+
Sbjct: 238  RDHRYHDRGGRRPRSRSPARRGGRSRSPGGRRNKSPVREGSAERRAKIEQWNREREQAEA 297

Query: 584  GNKNNDKHPSSDDYEKNGYSPNGEQYYDQNHHXXXXXXXXXQEGGYDY 441
             NKN++ H S +    N +  + +QYY+  H          Q GGY+Y
Sbjct: 298  TNKNDNSH-SDNGNNNNDFEQDDQQYYNPQHQ-EEDQQQQQQHGGYNY 343


>ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
          Length = 315

 Score =  348 bits (893), Expect = 2e-93
 Identities = 184/316 (58%), Positives = 202/316 (63%), Gaps = 9/316 (2%)
 Frame = -3

Query: 1430 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 1251
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDM+TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60

Query: 1250 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1071
            G+D  G  +DPR+IQ             LSKYG+IESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 1070 HAAAAVQSLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISXXX 891
            HAA AV++LTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLK+IS   
Sbjct: 121  HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180

Query: 890  XXXXXXXXXXXXXXXXXXSPHKNRNYEERPXXXXXXXXXXXXXXXXXDNRVXXXXXXXXX 711
                              SP+++R++EER                   +R          
Sbjct: 181  RRQLFGKSHGRHSRSRSRSPYRHRSHEERSHRSHSRKYDDRDHHHESRSR-RHRSTSPRH 239

Query: 710  XXXXXXXXXXXXXXXSPPARDGSAERRARIEQWNREKEQAESG---------NKNNDKHP 558
                             P RDGS ERRARIEQWNRE+E  E G         N N  KH 
Sbjct: 240  RRGRSRSRSPGGRRHHSPVRDGSEERRARIEQWNREREDQEPGYKVNAEEINNGNASKHH 299

Query: 557  SSDDYEKNGYSPNGEQ 510
                 E+   SP   Q
Sbjct: 300  GHQQQEQEPQSPQEGQ 315


>gb|ACN41131.1| unknown [Picea sitchensis]
          Length = 312

 Score =  339 bits (870), Expect = 9e-91
 Identities = 184/318 (57%), Positives = 204/318 (64%), Gaps = 7/318 (2%)
 Frame = -3

Query: 1430 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 1251
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHT+P+ISPT+LLSNMYQRPDMVTP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTP 60

Query: 1250 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1071
            GMD QG AMDPR+IQ             L KYGE+ESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61   GMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVGNVYVQFREEE 120

Query: 1070 HAAAAVQSLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS--- 900
             AA A++SL GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS   
Sbjct: 121  QAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180

Query: 899  XXXXXXXXXXXXXXXXXXXXXSPH----KNRNYEERPXXXXXXXXXXXXXXXXXDNRVXX 732
                                 SPH    K+R++++RP                  +R   
Sbjct: 181  RRRLFGRYRRYSHSRSRSRSASPHKDYEKHRHHDDRPRHGGRGYDRRYDVDDRDGHRGRR 240

Query: 731  XXXXXXXXXXXXXXXXXXXXXXSPPARDGSAERRARIEQWNREKEQAESGNKNNDKHPSS 552
                                    P R+GSAERRA+IEQWNREKE   S    N  +P  
Sbjct: 241  TRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKEAQASSTIAN--YP-- 296

Query: 551  DDYEKNGYSPNGEQYYDQ 498
               +  G   N + YYD+
Sbjct: 297  --MQNGGAYSNPQGYYDR 312