BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000476
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ36978.1| ribosomal protein S19 (chloroplast) [Datura stram...    77   1e-12
gb|JAA73169.1| Putative ubiquitin/40s ribosomal protein s27a fus...    76   3e-12
ref|YP_636339.1| ribosomal protein S19 [Eucalyptus globulus subs...    75   4e-12
gb|EGE85556.1| hypothetical protein BDDG_08501 [Ajellomyces derm...    75   4e-12
ref|YP_001671723.1| ribosomal protein S19 [Carica papaya] gi|215...    75   4e-12

>gb|AEQ36978.1| ribosomal protein S19 (chloroplast) [Datura stramonium]
          Length = 92

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = -3

Query: 151 QNLARFPFVANHLMRKFAKLGMGAEKEKIITWSRASTIIPAMVGHTIAIH 2
           ++L + PFVANHL++KF KL   AEKE I+TWSRASTIIP M+GHTIAIH
Sbjct: 3   RSLKKIPFVANHLLKKFDKLNTKAEKEIIVTWSRASTIIPTMIGHTIAIH 52


>gb|JAA73169.1| Putative ubiquitin/40s ribosomal protein s27a fusion, partial
           [Ixodes ricinus]
          Length = 184

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 43/68 (63%), Positives = 51/68 (75%)
 Frame = -3

Query: 253 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQNLARFPFVANHLMRKFAKLGMGAEK 74
           IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQ L+R P   +HL+     LG  +  
Sbjct: 36  IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQILSR-PXGNDHLL----PLGRSSTD 90

Query: 73  EKIITWSR 50
            ++ T+ R
Sbjct: 91  VRLPTYRR 98


>ref|YP_636339.1| ribosomal protein S19 [Eucalyptus globulus subsp. globulus]
           gi|309322486|ref|YP_003934000.1| ribosomal protein S19
           [Eucalyptus grandis] gi|122239621|sp|Q49KV8.1|RR19_EUCGG
           RecName: Full=30S ribosomal protein S19, chloroplastic
           gi|60460847|gb|AAX21067.1| ribosomal protein S19
           [Eucalyptus globulus subsp. globulus]
           gi|308223320|gb|ADO23628.1| ribosomal protein S19
           [Eucalyptus grandis]
          Length = 92

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = -3

Query: 151 QNLARFPFVANHLMRKFAKLGMGAEKEKIITWSRASTIIPAMVGHTIAIH 2
           ++L + PFVANHL+RK  KL   AEKE IITWSRASTIIP M+GHTIAIH
Sbjct: 3   RSLKKNPFVANHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIH 52


>gb|EGE85556.1| hypothetical protein BDDG_08501 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 333

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/83 (49%), Positives = 56/83 (67%)
 Frame = -3

Query: 253 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQNLARFPFVANHLMRKFAKLGMGAEK 74
           IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQ    F  V +++   + +      +
Sbjct: 44  IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQICMSFEQVLSYIDMFYVR------E 97

Query: 73  EKIITWSRASTIIPAMVGHTIAI 5
            + +T++   T++  + G TI +
Sbjct: 98  NQALTYT-LQTVVKTLTGKTITL 119



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = -3

Query: 253 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 149
           IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQ
Sbjct: 148 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 182



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = -3

Query: 253 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQ 149
           IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQ
Sbjct: 224 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ 258



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = -3

Query: 253 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
           IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 300 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 332


>ref|YP_001671723.1| ribosomal protein S19 [Carica papaya]
           gi|215275036|sp|B1A975.1|RR19_CARPA RecName: Full=30S
           ribosomal protein S19, chloroplastic
           gi|166344173|gb|ABY86823.1| ribosomal protein S19
           [Carica papaya]
          Length = 92

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = -3

Query: 151 QNLARFPFVANHLMRKFAKLGMGAEKEKIITWSRASTIIPAMVGHTIAIH 2
           ++L + PFVANHL+RK  KL   AEKE IITWSRASTIIP M+GHTIAIH
Sbjct: 3   RSLKKNPFVANHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIH 52