BLASTX nr result
ID: Coptis21_contig00000471
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000471 (758 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK92528.1| unknown [Populus trichocarpa] 115 8e-24 ref|XP_002305510.1| predicted protein [Populus trichocarpa] gi|1... 109 7e-22 gb|AFK43299.1| unknown [Medicago truncatula] 107 3e-21 ref|XP_002313717.1| predicted protein [Populus trichocarpa] gi|1... 107 4e-21 gb|AFK36072.1| unknown [Lotus japonicus] 106 5e-21 >gb|ABK92528.1| unknown [Populus trichocarpa] Length = 109 Score = 115 bits (289), Expect = 8e-24 Identities = 56/62 (90%), Positives = 58/62 (93%) Frame = -3 Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWFVCFISCRV 577 LVTVDKVGGPGEGYDDLAASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW V F SC++ Sbjct: 44 LVTVDKVGGPGEGYDDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWSVPF-SCKL 102 Query: 576 LI 571 LI Sbjct: 103 LI 104 >ref|XP_002305510.1| predicted protein [Populus trichocarpa] gi|118484861|gb|ABK94297.1| unknown [Populus trichocarpa] gi|222848474|gb|EEE86021.1| predicted protein [Populus trichocarpa] Length = 143 Score = 109 bits (272), Expect = 7e-22 Identities = 50/51 (98%), Positives = 50/51 (98%) Frame = -3 Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 604 LVTVDKVGGPGEGYDDLAASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW Sbjct: 44 LVTVDKVGGPGEGYDDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAW 94 >gb|AFK43299.1| unknown [Medicago truncatula] Length = 173 Score = 107 bits (267), Expect = 3e-21 Identities = 49/51 (96%), Positives = 49/51 (96%) Frame = -3 Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 604 LVTVDKVGGPGE YDDLAASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW Sbjct: 44 LVTVDKVGGPGENYDDLAASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAW 94 >ref|XP_002313717.1| predicted protein [Populus trichocarpa] gi|118487354|gb|ABK95505.1| unknown [Populus trichocarpa] gi|222850125|gb|EEE87672.1| predicted protein [Populus trichocarpa] Length = 143 Score = 107 bits (266), Expect = 4e-21 Identities = 49/51 (96%), Positives = 49/51 (96%) Frame = -3 Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 604 LVTVDKVGGPGE YDDLAASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW Sbjct: 44 LVTVDKVGGPGESYDDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAW 94 >gb|AFK36072.1| unknown [Lotus japonicus] Length = 173 Score = 106 bits (265), Expect = 5e-21 Identities = 49/51 (96%), Positives = 49/51 (96%) Frame = -3 Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 604 LVTVDKVGGPGE Y DLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW Sbjct: 74 LVTVDKVGGPGESYADLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 124