BLASTX nr result

ID: Coptis21_contig00000471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000471
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92528.1| unknown [Populus trichocarpa]                          115   8e-24
ref|XP_002305510.1| predicted protein [Populus trichocarpa] gi|1...   109   7e-22
gb|AFK43299.1| unknown [Medicago truncatula]                          107   3e-21
ref|XP_002313717.1| predicted protein [Populus trichocarpa] gi|1...   107   4e-21
gb|AFK36072.1| unknown [Lotus japonicus]                              106   5e-21

>gb|ABK92528.1| unknown [Populus trichocarpa]
          Length = 109

 Score =  115 bits (289), Expect = 8e-24
 Identities = 56/62 (90%), Positives = 58/62 (93%)
 Frame = -3

Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAWFVCFISCRV 577
           LVTVDKVGGPGEGYDDLAASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW V F SC++
Sbjct: 44  LVTVDKVGGPGEGYDDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWSVPF-SCKL 102

Query: 576 LI 571
           LI
Sbjct: 103 LI 104


>ref|XP_002305510.1| predicted protein [Populus trichocarpa] gi|118484861|gb|ABK94297.1|
           unknown [Populus trichocarpa]
           gi|222848474|gb|EEE86021.1| predicted protein [Populus
           trichocarpa]
          Length = 143

 Score =  109 bits (272), Expect = 7e-22
 Identities = 50/51 (98%), Positives = 50/51 (98%)
 Frame = -3

Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 604
           LVTVDKVGGPGEGYDDLAASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW
Sbjct: 44  LVTVDKVGGPGEGYDDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAW 94


>gb|AFK43299.1| unknown [Medicago truncatula]
          Length = 173

 Score =  107 bits (267), Expect = 3e-21
 Identities = 49/51 (96%), Positives = 49/51 (96%)
 Frame = -3

Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 604
           LVTVDKVGGPGE YDDLAASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW
Sbjct: 44  LVTVDKVGGPGENYDDLAASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAW 94


>ref|XP_002313717.1| predicted protein [Populus trichocarpa] gi|118487354|gb|ABK95505.1|
           unknown [Populus trichocarpa]
           gi|222850125|gb|EEE87672.1| predicted protein [Populus
           trichocarpa]
          Length = 143

 Score =  107 bits (266), Expect = 4e-21
 Identities = 49/51 (96%), Positives = 49/51 (96%)
 Frame = -3

Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 604
           LVTVDKVGGPGE YDDLAASLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW
Sbjct: 44  LVTVDKVGGPGESYDDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAW 94


>gb|AFK36072.1| unknown [Lotus japonicus]
          Length = 173

 Score =  106 bits (265), Expect = 5e-21
 Identities = 49/51 (96%), Positives = 49/51 (96%)
 Frame = -3

Query: 756 LVTVDKVGGPGEGYDDLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 604
           LVTVDKVGGPGE Y DLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW
Sbjct: 74  LVTVDKVGGPGESYADLAASLPGDDCRYAVFDFDFVTVDNCRKSKIFFIAW 124


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