BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000442
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase ac...   392   e-106
ref|XP_003547746.1| PREDICTED: mitochondrial ubiquitin ligase ac...   368   2e-99
ref|XP_003627295.1| Baculoviral IAP repeat-containing protein [M...   367   4e-99
ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase ac...   367   5e-99
ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase ac...   365   2e-98

>ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1 [Vitis
            vinifera] gi|297743001|emb|CBI35868.3| unnamed protein
            product [Vitis vinifera]
          Length = 391

 Score =  392 bits (1008), Expect = e-106
 Identities = 205/391 (52%), Positives = 267/391 (68%), Gaps = 8/391 (2%)
 Frame = -2

Query: 1462 ALSVLARLGLSNDXXXXXXXXXXXAVQAYSNYVSSSTALHKITHAKSVPISDLRSLL--- 1292
            A ++LA++ L+ D           AV+++    S+S+AL +I  + S  +SDLRSLL   
Sbjct: 8    AAAILAQVALAADGAILGLALAYVAVRSFIRLSSTSSALRQIDQSPSFRVSDLRSLLSPS 67

Query: 1291 -----DNNTSENGPLVVVRGFVQAKSFLNGSWQTLRPNVISHDASGETGVALQRTLSYVY 1127
                 D +TS +G LVVVRG V+AKS ++G+W++LRPNV+    SGE GV LQRT + +Y
Sbjct: 68   SDDESDQSTSSDGLLVVVRGTVEAKSAIDGNWKSLRPNVLVSHESGEKGVILQRTQTCIY 127

Query: 1126 DDWSILAGITSDFKRLPFIGRRKSLRTPKQTSLRSVPFVLVGTSLWPHPEYVSVNLEGSD 947
            ++W    G TSD + L      +S +  + TSLR+VPF+LV    WP  +YV VN++GS 
Sbjct: 128  NEWRGFFGWTSDIRTL----FARSWKEKESTSLRTVPFILVEGGRWPQSDYVIVNMDGSR 183

Query: 946  QPLPLTTVYSHLEPVSVTPLTFLQAIFGHPYPVGVLDEEKILPLGKEITAIGVCSLQEGN 767
             PLPLTTVY  L+PV+ +P TFLQA+FGH YPVG+LDEEK+LPLGKEITA+G+CSL+ G 
Sbjct: 184  HPLPLTTVYHQLQPVNASPYTFLQALFGHDYPVGLLDEEKLLPLGKEITAVGICSLKNGI 243

Query: 766  LQIKALKDLPYFLTEKSKDDMVQHLTFKSSILFWCTIIFGSASLAILGYSSFKNXXXXXX 587
             +IK+ KDLPYFL+E SKD MV  L FKS +LFW  +I GS S+ +LGY+  +N      
Sbjct: 244  PEIKSCKDLPYFLSEMSKDQMVVDLVFKSKVLFWSGVILGSVSIGVLGYAVVRNWNRWKE 303

Query: 586  XXXXXQDLQARSVEIDETDDSTQVQDDDGTEDIPDGQLCVICLMRRRRSAFVPCGHLACC 407
                           D+TD  TQ+ +DD   D+PDG+LCVICLMRR+RSAFVPCGHL CC
Sbjct: 304  WRQQRGVRPPSQAVTDDTD--TQIAEDD-AGDVPDGELCVICLMRRKRSAFVPCGHLVCC 360

Query: 406  QRCALSVERDSSPKCPLCRQAIRTSVRIYNS 314
            QRCALSVER+ SPKCP+CRQ IR+SVRIY S
Sbjct: 361  QRCALSVERELSPKCPVCRQIIRSSVRIYGS 391


>ref|XP_003547746.1| PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1-like
            [Glycine max]
          Length = 383

 Score =  368 bits (945), Expect = 2e-99
 Identities = 193/384 (50%), Positives = 253/384 (65%), Gaps = 2/384 (0%)
 Frame = -2

Query: 1459 LSVLARLGLSNDXXXXXXXXXXXAVQAYSNYVSSSTALHKITHAKSVPISDLRSLLDNNT 1280
            LS+L++L LS D           AV+    + ++S +L K+  A S+ +SDLRSLL    
Sbjct: 9    LSLLSKLALSFDGAVLGVALAFAAVRTLFKFTATSASLRKLRRAPSISVSDLRSLLAEPP 68

Query: 1279 SEN--GPLVVVRGFVQAKSFLNGSWQTLRPNVISHDASGETGVALQRTLSYVYDDWSILA 1106
            S+   G +V++RG V AKS ++G+W+TL+P V+    SG+ GV LQRT + +Y+DW  L 
Sbjct: 69   SDADAGEIVIIRGTVDAKSAVDGTWKTLKPGVLVSRESGDKGVILQRTQTCIYNDWKGLL 128

Query: 1105 GITSDFKRLPFIGRRKSLRTPKQTSLRSVPFVLVGTSLWPHPEYVSVNLEGSDQPLPLTT 926
            G TSD + +      +SLR    TS R VPFVL+     P+ EYV VN++GS  PLPLTT
Sbjct: 129  GWTSDLRAIC----ARSLRQQDSTSFRKVPFVLIDVGRRPNAEYVVVNMDGSRHPLPLTT 184

Query: 925  VYSHLEPVSVTPLTFLQAIFGHPYPVGVLDEEKILPLGKEITAIGVCSLQEGNLQIKALK 746
            VY  L+P++ +P TFLQA+FGH YPVG+LDEEKILPLGK+ITA+G CSL+ G  +IK+ K
Sbjct: 185  VYHKLQPINASPYTFLQALFGHEYPVGLLDEEKILPLGKDITAVGHCSLKNGIAEIKSCK 244

Query: 745  DLPYFLTEKSKDDMVQHLTFKSSILFWCTIIFGSASLAILGYSSFKNXXXXXXXXXXXQD 566
            D+PYFL++ SKD M+  L+ K+ ILFW  I  GS S+ +LGY+  +N           Q 
Sbjct: 245  DIPYFLSDLSKDQMIVDLSIKAKILFWGGISLGSMSVGVLGYAVLRNWIKWKRWKVQRQL 304

Query: 565  LQARSVEIDETDDSTQVQDDDGTEDIPDGQLCVICLMRRRRSAFVPCGHLACCQRCALSV 386
             Q R    D      + Q DD  ED+PDGQLCVICLMRRRRS F+PCGHL CCQ CA+SV
Sbjct: 305  QQQRQAVSD-----AEPQVDDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISV 359

Query: 385  ERDSSPKCPLCRQAIRTSVRIYNS 314
            ER+ +PKCP+CRQ IR SVR Y S
Sbjct: 360  EREVAPKCPVCRQEIRDSVRTYES 383


>ref|XP_003627295.1| Baculoviral IAP repeat-containing protein [Medicago truncatula]
            gi|66947626|emb|CAJ00009.1| C3HC4 zinc finger containing
            protein [Medicago truncatula] gi|355521317|gb|AET01771.1|
            Baculoviral IAP repeat-containing protein [Medicago
            truncatula]
          Length = 383

 Score =  367 bits (943), Expect = 4e-99
 Identities = 192/384 (50%), Positives = 257/384 (66%), Gaps = 2/384 (0%)
 Frame = -2

Query: 1459 LSVLARLGLSNDXXXXXXXXXXXAVQAYSNYVSSSTALHKITHAKSVPISDLRSLLD--N 1286
            +S+L++L LS D           AV++   +  +S AL KIT A SV +SDLRSLL   +
Sbjct: 9    VSLLSQLALSFDGAVLGFAVAYVAVRSIRKFTLTSAALRKITAAPSVSVSDLRSLLTETD 68

Query: 1285 NTSENGPLVVVRGFVQAKSFLNGSWQTLRPNVISHDASGETGVALQRTLSYVYDDWSILA 1106
              S+ G +V+VRG V AK+ ++GSW+ L P V+    SG+ GV LQRT + +Y++W  L 
Sbjct: 69   ENSDEGKIVIVRGTVDAKNVVDGSWKALWPGVLVSSESGDKGVVLQRTQTCIYNEWKGLF 128

Query: 1105 GITSDFKRLPFIGRRKSLRTPKQTSLRSVPFVLVGTSLWPHPEYVSVNLEGSDQPLPLTT 926
            G TSD + L F+   +S R  + TSLR +PFVL+      +PEYV VN++GS  PLPLTT
Sbjct: 129  GWTSDLRAL-FL---RSWRQQESTSLRKIPFVLIDVGRPSNPEYVVVNMDGSSHPLPLTT 184

Query: 925  VYSHLEPVSVTPLTFLQAIFGHPYPVGVLDEEKILPLGKEITAIGVCSLQEGNLQIKALK 746
            VY  L+PV+  P TFLQA+FGH YPVG+LDEEKILPLGK+++A+G+CSL+ G  +IKA  
Sbjct: 185  VYHRLQPVNPPPYTFLQALFGHEYPVGLLDEEKILPLGKDVSAVGLCSLRNGIAEIKACN 244

Query: 745  DLPYFLTEKSKDDMVQHLTFKSSILFWCTIIFGSASLAILGYSSFKNXXXXXXXXXXXQD 566
            DLPY+L++ SKD M+  L+FK+ +LFW  I+ GS S+ I+GY+  +N           Q 
Sbjct: 245  DLPYYLSDLSKDQMIVDLSFKTKLLFWSGILLGSMSVGIIGYAVVRNWNKWKQWKQQRQL 304

Query: 565  LQARSVEIDETDDSTQVQDDDGTEDIPDGQLCVICLMRRRRSAFVPCGHLACCQRCALSV 386
             Q R   I+    +     DD  ED+PDGQLCVICLMRRRRS F+PCGHL CCQ CA+SV
Sbjct: 305  QQRRQQPIEPVPPT-----DDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISV 359

Query: 385  ERDSSPKCPLCRQAIRTSVRIYNS 314
            E + +PKCP+CRQ +R SVRI+ S
Sbjct: 360  ESEVAPKCPVCRQEVRDSVRIFES 383


>ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
            [Glycine max]
          Length = 388

 Score =  367 bits (942), Expect = 5e-99
 Identities = 196/389 (50%), Positives = 255/389 (65%), Gaps = 7/389 (1%)
 Frame = -2

Query: 1459 LSVLARLGLSNDXXXXXXXXXXXAVQAYSNYVSSSTALHKITHAKSVPISDLRSLLD--- 1289
            +S+L++L LS D           AV+    + ++S AL K+  A SV +SDLRSLL    
Sbjct: 9    VSLLSQLALSFDGAVLGLALAYAAVRTLFKFTATSAALRKLHRAPSVSVSDLRSLLAEIP 68

Query: 1288 ---NNTSENGPLVVVRGFVQAKSFLNG-SWQTLRPNVISHDASGETGVALQRTLSYVYDD 1121
               +  S+ G +V+VRG V AKS + G +W+TLRP V+    SG+  V LQRT + +Y++
Sbjct: 69   SDADGNSDGGNIVIVRGTVDAKSTVEGGTWKTLRPGVLVSRESGDKSVILQRTQTCIYNE 128

Query: 1120 WSILAGITSDFKRLPFIGRRKSLRTPKQTSLRSVPFVLVGTSLWPHPEYVSVNLEGSDQP 941
            W  L G TSD + +      +S R  + TSLR VPFVL+    WP+ EYV VN++GS  P
Sbjct: 129  WKGLFGWTSDLRAI----FARSWRQQESTSLRKVPFVLIDVGRWPNAEYVVVNMDGSRHP 184

Query: 940  LPLTTVYSHLEPVSVTPLTFLQAIFGHPYPVGVLDEEKILPLGKEITAIGVCSLQEGNLQ 761
            LPL+TVY  L+P++ +P TFLQA+FGH YPVG+LDEEKILPLGK ITA+G+CSL+ G  +
Sbjct: 185  LPLSTVYHKLQPITASPYTFLQALFGHEYPVGLLDEEKILPLGKNITAVGLCSLKNGIAE 244

Query: 760  IKALKDLPYFLTEKSKDDMVQHLTFKSSILFWCTIIFGSASLAILGYSSFKNXXXXXXXX 581
            IK+ KDLPYFL++ SKD M+  L+ K+ ILFW  I  GS S+ +LGY+  +N        
Sbjct: 245  IKSCKDLPYFLSDLSKDQMIVDLSSKTKILFWGGIALGSMSVGVLGYAVVRNWNKWKQWK 304

Query: 580  XXXQDLQARSVEIDETDDSTQVQDDDGTEDIPDGQLCVICLMRRRRSAFVPCGHLACCQR 401
               Q  Q R    D      + Q DD  ED+PDGQLCVICLMRRRRS F+PCGHL CCQ 
Sbjct: 305  QQRQLQQQRQAVSD-----VEPQMDDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQG 359

Query: 400  CALSVERDSSPKCPLCRQAIRTSVRIYNS 314
            CA+SVER+ +PKCP+CRQ IR SVRIY S
Sbjct: 360  CAISVEREVAPKCPVCRQEIRDSVRIYES 388


>ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
            [Glycine max]
          Length = 387

 Score =  365 bits (936), Expect = 2e-98
 Identities = 194/388 (50%), Positives = 255/388 (65%), Gaps = 6/388 (1%)
 Frame = -2

Query: 1459 LSVLARLGLSNDXXXXXXXXXXXAVQAYSNYVSSSTALHKITHAKSVPISDLRSLL---- 1292
            +S+L++L LS D           AV+    + ++S+AL K+  A S+ +SDLRSLL    
Sbjct: 9    VSLLSQLALSLDGAVLGFALAYAAVRTLFKFTATSSALRKLRRAPSLSVSDLRSLLAEIP 68

Query: 1291 --DNNTSENGPLVVVRGFVQAKSFLNGSWQTLRPNVISHDASGETGVALQRTLSYVYDDW 1118
               +  S+ G +V+VRG V AKS ++G+W+TLRP V+    SG+ GV LQRT + +Y++W
Sbjct: 69   SDGDGNSKGGIIVIVRGTVDAKSAVDGTWKTLRPGVLVSRESGDKGVILQRTQTCIYNEW 128

Query: 1117 SILAGITSDFKRLPFIGRRKSLRTPKQTSLRSVPFVLVGTSLWPHPEYVSVNLEGSDQPL 938
              L G TSD + +      +S R  + TSLR VPF+L      P+ EYV VN++GS  PL
Sbjct: 129  KGLFGWTSDLRAI----FARSWRQQESTSLRKVPFLLTDVGRRPNAEYVVVNMDGSRHPL 184

Query: 937  PLTTVYSHLEPVSVTPLTFLQAIFGHPYPVGVLDEEKILPLGKEITAIGVCSLQEGNLQI 758
            PLTTVY  L+P++ +P TFLQA+FGH YPVG+LDEEKILPLGK+ITA+G+CSL+ G  +I
Sbjct: 185  PLTTVYHKLQPITASPYTFLQALFGHEYPVGLLDEEKILPLGKDITAVGLCSLKNGIAEI 244

Query: 757  KALKDLPYFLTEKSKDDMVQHLTFKSSILFWCTIIFGSASLAILGYSSFKNXXXXXXXXX 578
            K+ K LPYFL++ SKD M+  L+ K+ ILFW  I  GS S+ +LGY+  +N         
Sbjct: 245  KSCKYLPYFLSDLSKDQMIMDLSIKTKILFWGGIALGSMSVGVLGYAVVRNWNKWKQWKQ 304

Query: 577  XXQDLQARSVEIDETDDSTQVQDDDGTEDIPDGQLCVICLMRRRRSAFVPCGHLACCQRC 398
              Q  Q R    D      + Q DD  ED PDGQLCVICLMRRRRS F+PCGHL CCQ C
Sbjct: 305  QRQLQQQRQAVSD-----VEPQMDDEIEDAPDGQLCVICLMRRRRSVFIPCGHLVCCQGC 359

Query: 397  ALSVERDSSPKCPLCRQAIRTSVRIYNS 314
            A+SVER+ +PKCP+CRQ IR SVRIY S
Sbjct: 360  AISVEREVAPKCPVCRQEIRDSVRIYES 387