BLASTX nr result

ID: Coptis21_contig00000401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000401
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260...    80   1e-13
emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]    80   1e-13
ref|NP_001235956.1| uncharacterized protein LOC100526917 [Glycin...    79   5e-13
ref|XP_003593218.1| Methyl binding domain protein [Medicago trun...    77   1e-12

>ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|222847441|gb|EEE84988.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/75 (49%), Positives = 53/75 (70%)
 Frame = +1

Query: 4   QVPMDLGYDSVLQDALHSTVQFGWQPVLPNNNQQHTSVCVWCRIPFNHEPFNPEMQSDSV 183
           +VP+ LG  + ++ A  +++QF    ++   ++Q T+VCVWC   F+HE F+ EMQS SV
Sbjct: 761 EVPLGLGNITEMEAAYDASLQFESDVIVDTADRQLTTVCVWCGAEFSHEAFDTEMQSGSV 820

Query: 184 GFMCPTCKAKISGQL 228
           G+MCP CKAKISGQL
Sbjct: 821 GYMCPDCKAKISGQL 835


>ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260704 [Vitis vinifera]
          Length = 403

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
 Frame = +1

Query: 4   QVPMDLGYDSVLQDALHSTVQFGWQPVLPNNNQQH--TSVCVWCRIPFNHEPFNPEMQSD 177
           +V M L   + ++D   S++ F  + V+ +   +H  T+ CVWCR+ F+HE    EMQSD
Sbjct: 313 EVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEAVESEMQSD 372

Query: 178 SVGFMCPTCKAKISGQL 228
           SVGFMCPTCK+KISGQL
Sbjct: 373 SVGFMCPTCKSKISGQL 389


>emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]
          Length = 849

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
 Frame = +1

Query: 4   QVPMDLGYDSVLQDALHSTVQFGWQPVLPNNNQQH--TSVCVWCRIPFNHEPFNPEMQSD 177
           +V M L   + ++D   S++ F  + V+ +   +H  T+ CVWCR+ F+HE    EMQSD
Sbjct: 759 EVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEAVESEMQSD 818

Query: 178 SVGFMCPTCKAKISGQL 228
           SVGFMCPTCK+KISGQL
Sbjct: 819 SVGFMCPTCKSKISGQL 835


>ref|NP_001235956.1| uncharacterized protein LOC100526917 [Glycine max]
           gi|255631145|gb|ACU15938.1| unknown [Glycine max]
          Length = 169

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
 Frame = +1

Query: 7   VPMDLGYDSVLQDALHSTVQFGWQPVLPN--NNQQHTSVCVWCRIPFNHEPFNPEMQSDS 180
           VP +L  ++V++    S VQF  Q V+ N     Q T+VCVWC I FNH+  N E+Q DS
Sbjct: 80  VPTELTNNTVVEGTCASPVQFESQVVMLNIGGRNQLTTVCVWCGIEFNHDAVNSEIQPDS 139

Query: 181 VGFMCPTCKAKISGQL 228
           V FMCP CKAKISGQ+
Sbjct: 140 VRFMCPACKAKISGQV 155


>ref|XP_003593218.1| Methyl binding domain protein [Medicago truncatula]
           gi|355482266|gb|AES63469.1| Methyl binding domain
           protein [Medicago truncatula]
          Length = 805

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +1

Query: 7   VPMDLGYDSVLQDALHSTVQFGWQPVLPNNN--QQHTSVCVWCRIPFNHEPFNPEMQSDS 180
           V  +L  D V+Q    S+     Q V+ N +   Q T+ CVWC I FNH+  N E+QSDS
Sbjct: 718 VSTELANDIVVQGTCTSSAHSASQEVMLNMDYKNQLTTTCVWCGIEFNHDAVNSEIQSDS 777

Query: 181 VGFMCPTCKAKISGQL 228
           VGFMCP CKAKISGQ+
Sbjct: 778 VGFMCPVCKAKISGQI 793


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