BLASTX nr result
ID: Coptis21_contig00000401
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000401 (357 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|2... 81 8e-14 ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260... 80 1e-13 emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera] 80 1e-13 ref|NP_001235956.1| uncharacterized protein LOC100526917 [Glycin... 79 5e-13 ref|XP_003593218.1| Methyl binding domain protein [Medicago trun... 77 1e-12 >ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|222847441|gb|EEE84988.1| predicted protein [Populus trichocarpa] Length = 837 Score = 81.3 bits (199), Expect = 8e-14 Identities = 37/75 (49%), Positives = 53/75 (70%) Frame = +1 Query: 4 QVPMDLGYDSVLQDALHSTVQFGWQPVLPNNNQQHTSVCVWCRIPFNHEPFNPEMQSDSV 183 +VP+ LG + ++ A +++QF ++ ++Q T+VCVWC F+HE F+ EMQS SV Sbjct: 761 EVPLGLGNITEMEAAYDASLQFESDVIVDTADRQLTTVCVWCGAEFSHEAFDTEMQSGSV 820 Query: 184 GFMCPTCKAKISGQL 228 G+MCP CKAKISGQL Sbjct: 821 GYMCPDCKAKISGQL 835 >ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260704 [Vitis vinifera] Length = 403 Score = 80.5 bits (197), Expect = 1e-13 Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%) Frame = +1 Query: 4 QVPMDLGYDSVLQDALHSTVQFGWQPVLPNNNQQH--TSVCVWCRIPFNHEPFNPEMQSD 177 +V M L + ++D S++ F + V+ + +H T+ CVWCR+ F+HE EMQSD Sbjct: 313 EVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEAVESEMQSD 372 Query: 178 SVGFMCPTCKAKISGQL 228 SVGFMCPTCK+KISGQL Sbjct: 373 SVGFMCPTCKSKISGQL 389 >emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera] Length = 849 Score = 80.5 bits (197), Expect = 1e-13 Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 2/77 (2%) Frame = +1 Query: 4 QVPMDLGYDSVLQDALHSTVQFGWQPVLPNNNQQH--TSVCVWCRIPFNHEPFNPEMQSD 177 +V M L + ++D S++ F + V+ + +H T+ CVWCR+ F+HE EMQSD Sbjct: 759 EVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEAVESEMQSD 818 Query: 178 SVGFMCPTCKAKISGQL 228 SVGFMCPTCK+KISGQL Sbjct: 819 SVGFMCPTCKSKISGQL 835 >ref|NP_001235956.1| uncharacterized protein LOC100526917 [Glycine max] gi|255631145|gb|ACU15938.1| unknown [Glycine max] Length = 169 Score = 78.6 bits (192), Expect = 5e-13 Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 2/76 (2%) Frame = +1 Query: 7 VPMDLGYDSVLQDALHSTVQFGWQPVLPN--NNQQHTSVCVWCRIPFNHEPFNPEMQSDS 180 VP +L ++V++ S VQF Q V+ N Q T+VCVWC I FNH+ N E+Q DS Sbjct: 80 VPTELTNNTVVEGTCASPVQFESQVVMLNIGGRNQLTTVCVWCGIEFNHDAVNSEIQPDS 139 Query: 181 VGFMCPTCKAKISGQL 228 V FMCP CKAKISGQ+ Sbjct: 140 VRFMCPACKAKISGQV 155 >ref|XP_003593218.1| Methyl binding domain protein [Medicago truncatula] gi|355482266|gb|AES63469.1| Methyl binding domain protein [Medicago truncatula] Length = 805 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 2/76 (2%) Frame = +1 Query: 7 VPMDLGYDSVLQDALHSTVQFGWQPVLPNNN--QQHTSVCVWCRIPFNHEPFNPEMQSDS 180 V +L D V+Q S+ Q V+ N + Q T+ CVWC I FNH+ N E+QSDS Sbjct: 718 VSTELANDIVVQGTCTSSAHSASQEVMLNMDYKNQLTTTCVWCGIEFNHDAVNSEIQSDS 777 Query: 181 VGFMCPTCKAKISGQL 228 VGFMCP CKAKISGQ+ Sbjct: 778 VGFMCPVCKAKISGQI 793