BLASTX nr result

ID: Coptis21_contig00000376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000376
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ02349.1| 60S ribosomal protein L35a [Vernicia fordii]           120   9e-26
ref|XP_002316240.1| predicted protein [Populus trichocarpa] gi|1...   120   9e-26
ref|NP_001241369.1| uncharacterized protein LOC100800463 [Glycin...   120   1e-25
gb|ADR71255.1| 60S ribosomal protein L35aA [Hevea brasiliensis]       120   2e-25
ref|XP_002527874.1| 60S ribosomal protein L35a, putative [Ricinu...   119   2e-25

>gb|ACJ02349.1| 60S ribosomal protein L35a [Vernicia fordii]
          Length = 112

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = -1

Query: 418 YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 248
           YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 56  YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>ref|XP_002316240.1| predicted protein [Populus trichocarpa] gi|118482276|gb|ABK93065.1|
           unknown [Populus trichocarpa]
           gi|222865280|gb|EEF02411.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = -1

Query: 418 YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 248
           YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 56  YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>ref|NP_001241369.1| uncharacterized protein LOC100800463 [Glycine max]
           gi|255637727|gb|ACU19186.1| unknown [Glycine max]
          Length = 112

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/57 (94%), Positives = 56/57 (98%)
 Frame = -1

Query: 418 YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 248
           YIYKAKVKKNGSHYRCIWGKVTRPHGNSG+VRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 56  YIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI 112


>gb|ADR71255.1| 60S ribosomal protein L35aA [Hevea brasiliensis]
          Length = 112

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/57 (96%), Positives = 56/57 (98%)
 Frame = -1

Query: 418 YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 248
           YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMG +VRVFMYPSNI
Sbjct: 56  YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 112


>ref|XP_002527874.1| 60S ribosomal protein L35a, putative [Ricinus communis]
           gi|223532725|gb|EEF34505.1| 60S ribosomal protein L35a,
           putative [Ricinus communis]
          Length = 112

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/57 (94%), Positives = 56/57 (98%)
 Frame = -1

Query: 418 YIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGMKVRVFMYPSNI 248
           Y+YKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPP+SMG KVRVFMYPSNI
Sbjct: 56  YVYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGDKVRVFMYPSNI 112


Top