BLASTX nr result

ID: Coptis21_contig00000343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000343
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312673.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-36
ref|XP_002315668.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-35
emb|CBI18643.3| unnamed protein product [Vitis vinifera]              154   4e-35
emb|CAN80873.1| hypothetical protein VITISV_004539 [Vitis vinifera]   154   7e-35
ref|XP_004135273.1| PREDICTED: uncharacterized protein LOC101222...   153   9e-35

>ref|XP_002312673.1| predicted protein [Populus trichocarpa] gi|222852493|gb|EEE90040.1|
            predicted protein [Populus trichocarpa]
          Length = 191

 Score =  159 bits (401), Expect = 2e-36
 Identities = 96/196 (48%), Positives = 121/196 (61%), Gaps = 1/196 (0%)
 Frame = -3

Query: 1183 SPKNPGNTIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFPELLIKLGELNGSS 1004
            +P +   TIKFL SYGGKI+PRF DGKLRY GGETRV+ +DRSI+F ELL+KLGEL G+S
Sbjct: 15   APSSAPATIKFLCSYGGKIIPRFPDGKLRYQGGETRVIGVDRSISFAELLLKLGELCGTS 74

Query: 1003 VSLRCQLPDEDLDALISVVTDEDLSNIIEEYDIA-SQTNGSPLKIRGFLYXXXXXXXXXX 827
            VSLRCQLP EDLDAL+S+ +DEDL+N+IEEYD A + T  + LKIR FL           
Sbjct: 75   VSLRCQLPKEDLDALVSITSDEDLANLIEEYDRAGAATPTASLKIRAFLSLPKKIYSSSS 134

Query: 826  XXSATSLKANSAAKTYFYYPHVYAPRPAPIPISFITPITCATPVSRRGTMKTCYHQYPGN 647
              S++S  ++S +     Y    + +  P P           P  + G     YH + GN
Sbjct: 135  KSSSSSSSSSSPSSPSNSYGAFSSKKKTPPP-----------PQYQYG-----YHAH-GN 177

Query: 646  AMRVPSRLVHNGNHWQ 599
               +   LVHNGNHWQ
Sbjct: 178  PGHI--YLVHNGNHWQ 191


>ref|XP_002315668.1| predicted protein [Populus trichocarpa] gi|222864708|gb|EEF01839.1|
            predicted protein [Populus trichocarpa]
          Length = 188

 Score =  155 bits (393), Expect = 2e-35
 Identities = 96/198 (48%), Positives = 124/198 (62%), Gaps = 10/198 (5%)
 Frame = -3

Query: 1162 TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFPELLIKLGELNGSSVSLRCQL 983
            TIKFL SYGGKI+PRF DGKLRYHGGETRV+ ++RSI+F ELL+KLGEL G+SV+LRCQL
Sbjct: 1    TIKFLCSYGGKIIPRFPDGKLRYHGGETRVLGVERSISFAELLLKLGELRGTSVNLRCQL 60

Query: 982  PDEDLDALISVVTDEDLSNIIEEYDIA--SQTNGSPLKIRGFLYXXXXXXXXXXXXSATS 809
            P EDLDAL+S+ + EDL+N+IEEYD A  + T  + LKIR FL             S++S
Sbjct: 61   PKEDLDALVSITSGEDLANLIEEYDRAAGAATPTASLKIRAFL---SFPKKISSSSSSSS 117

Query: 808  LKANSAAKTYFYYPHVYAPRPAP--------IPISFITPITCATPVSRRGTMKTCYHQYP 653
              ++S++   +  P + +   AP         P++F    T   P       +  YH + 
Sbjct: 118  SSSSSSSSCSYGGPTIGSTSTAPWCYHHQISKPVAFSVRKTPPAP----HQYEYGYHAH- 172

Query: 652  GNAMRVPSRLVHNGNHWQ 599
            GN   V   LVHNGNHWQ
Sbjct: 173  GNPSHV--YLVHNGNHWQ 188


>emb|CBI18643.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score =  154 bits (390), Expect = 4e-35
 Identities = 97/190 (51%), Positives = 115/190 (60%), Gaps = 2/190 (1%)
 Frame = -3

Query: 1162 TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFPELLIKLGELNGSSVSLRCQL 983
            TIKFL SYGGKILPR+ DGKLRYHGGETRV+ +DRSI+F ELL+KLGEL G SV LRCQL
Sbjct: 7    TIKFLCSYGGKILPRYPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCGKSVCLRCQL 66

Query: 982  PDEDLDALISVVTDEDLSNIIEEYDIASQTNGSPLKIRGFLYXXXXXXXXXXXXSATSLK 803
            P EDLDAL+SV +DEDL+N+IEEYD  +    S LKIR FL             S+ S  
Sbjct: 67   PTEDLDALVSVTSDEDLANLIEEYDRVASPPAS-LKIRAFLSPPKSIKKISPPPSSASSS 125

Query: 802  ANSAAKTYFYYPHVYAPRPAPIPISF--ITPITCATPVSRRGTMKTCYHQYPGNAMRVPS 629
              S A    +        PA + +    I+P       SR+      YH + GN   V  
Sbjct: 126  QLSVASASRF------TMPAAVDLCHHQISPQVPFQKSSRK-VPHYGYHVH-GNPSHV-- 175

Query: 628  RLVHNGNHWQ 599
             L+HNGNHWQ
Sbjct: 176  YLIHNGNHWQ 185


>emb|CAN80873.1| hypothetical protein VITISV_004539 [Vitis vinifera]
          Length = 185

 Score =  154 bits (388), Expect = 7e-35
 Identities = 98/196 (50%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
 Frame = -3

Query: 1162 TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFPELLIKLGELNGSSVSLRCQL 983
            TIKFL SYGGKILPR+ DGKLRYHGGETRV+ +DRSI+F ELL+KLGEL G SV LRCQL
Sbjct: 7    TIKFLCSYGGKILPRYPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCGKSVCLRCQL 66

Query: 982  PDEDLDALISVVTDEDLSNIIEEYDIASQTNGSPLKIRGFLY-XXXXXXXXXXXXSATSL 806
            P EDLDAL+SV +DEDL+N+IEEYD  +    S LKIR FL              SA+S 
Sbjct: 67   PTEDLDALVSVTSDEDLANLIEEYDRVASPPAS-LKIRAFLSPPKSIKKISPPPSSASSS 125

Query: 805  KANSAAKTYFYYP-------HVYAPRPAPIPISFITPITCATPVSRRGTMKTCYHQYPGN 647
            + + A+ + F  P       H  +P+   +P             S R      YH + GN
Sbjct: 126  QLSVASASRFTMPAAVDXCHHQISPQ---VPFQ----------KSSRKVPHYGYHVH-GN 171

Query: 646  AMRVPSRLVHNGNHWQ 599
               V   L+HNGNHWQ
Sbjct: 172  PSHV--YLIHNGNHWQ 185


>ref|XP_004135273.1| PREDICTED: uncharacterized protein LOC101222057 [Cucumis sativus]
            gi|449478612|ref|XP_004155369.1| PREDICTED:
            uncharacterized protein LOC101224076 [Cucumis sativus]
          Length = 209

 Score =  153 bits (387), Expect = 9e-35
 Identities = 96/199 (48%), Positives = 121/199 (60%), Gaps = 11/199 (5%)
 Frame = -3

Query: 1162 TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFPELLIKLGELNGSSVSLRCQL 983
            TIKFL SYGGKILPR+ DGKLRY GGETRV+ +DRSI F ELL+KLG+L G+ VSLRCQL
Sbjct: 20   TIKFLCSYGGKILPRYPDGKLRYIGGETRVLAVDRSIPFSELLLKLGQLCGTCVSLRCQL 79

Query: 982  PDEDLDALISVVTDEDLSNIIEEYDIASQTNGSPLKIRGFLYXXXXXXXXXXXXSATSLK 803
            P EDLDAL+S+ +DEDL+N+IEEYD A+ +  S LKIR FL             S+ S  
Sbjct: 80   PSEDLDALVSITSDEDLANLIEEYDRAA-SPPSFLKIRAFLSLPKSVKKNPLSSSSAS-S 137

Query: 802  ANSAAKTYFYYPHVYAPRPAPIPISFITPITCA----TPV-------SRRGTMKTCYHQY 656
            ++S++K       + +PR     IS   P  C     TPV         +  +  C +  
Sbjct: 138  SSSSSKPSSPITAISSPR-----ISTQVPDYCVHQIPTPVRFSYRWKKSQSKVPHCSYHL 192

Query: 655  PGNAMRVPSRLVHNGNHWQ 599
             GN   +   L+HNGNHWQ
Sbjct: 193  QGNPSHI--YLIHNGNHWQ 209


Top