BLASTX nr result
ID: Coptis21_contig00000278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000278
(228 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucu... 150 1e-34
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 150 1e-34
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 150 1e-34
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 150 1e-34
ref|NP_001148453.1| LOC100282068 [Zea mays] gi|224059606|ref|XP_... 150 1e-34
>ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
Length = 126
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 13 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 72
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 73 DNVKAKIQDKEGIPPD 88
Score = 75.9 bits (185), Expect = 3e-12
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 111
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 89 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 125
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 91 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 150
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 151 DNVKAKIQDKEGIPPD 166
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 167 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 226
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 227 DNVKAKIQDKEGIPPD 242
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 243 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 302
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 303 DNVKAKIQDKEGIPPD 318
Score = 75.9 bits (185), Expect = 3e-12
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 111
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 319 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 355
Score = 70.1 bits (170), Expect = 2e-10
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 216
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 35
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1|
Ubiquitin [Medicago truncatula]
Length = 533
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 40 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 100 DNVKAKIQDKEGIPPD 115
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 116 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 176 DNVKAKIQDKEGIPPD 191
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 192 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 252 DNVKAKIQDKEGIPPD 267
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 420 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 479
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 480 DNVKAKIQDKEGIPPD 495
Score = 149 bits (376), Expect = 2e-34
Identities = 75/76 (98%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 403
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 404 DNVKAKIQDKEGIPPD 419
Score = 147 bits (372), Expect = 7e-34
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 268 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKI DKEGIPPD
Sbjct: 328 DNVKAKILDKEGIPPD 343
Score = 79.3 bits (194), Expect = 3e-13
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 228
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 39
Score = 75.9 bits (185), Expect = 3e-12
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 111
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 496 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 76 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 135
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 136 DNVKAKIQDKEGIPPD 151
Score = 149 bits (375), Expect = 3e-34
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 152 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 211
Query: 181 DNVKAKIQDKEGIPPD 228
DNVK KIQDKEGIPPD
Sbjct: 212 DNVKTKIQDKEGIPPD 227
Score = 148 bits (374), Expect = 4e-34
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +1
Query: 4 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 183
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
Sbjct: 1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID 60
Query: 184 NVKAKIQDKEGIPPD 228
NVKAKIQDKEGIPPD
Sbjct: 61 NVKAKIQDKEGIPPD 75
Score = 75.9 bits (185), Expect = 3e-12
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 111
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 228 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 264
>ref|NP_001148453.1| LOC100282068 [Zea mays] gi|224059606|ref|XP_002299930.1| predicted
protein [Populus trichocarpa]
gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago
truncatula] gi|902586|gb|AAC49014.1| ubiquitin [Zea
mays] gi|195619382|gb|ACG31521.1| polyubiquitin
containing 7 ubiquitin monomers [Zea mays]
gi|222847188|gb|EEE84735.1| predicted protein [Populus
trichocarpa] gi|238013752|gb|ACR37911.1| unknown [Zea
mays] gi|355508726|gb|AES89868.1| Ubiquitin [Medicago
truncatula] gi|413926508|gb|AFW66440.1| putative
ubiquitin family protein isoform 1 [Zea mays]
gi|413926509|gb|AFW66441.1| putative ubiquitin family
protein isoform 2 [Zea mays]
Length = 381
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 40 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 99
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 100 DNVKAKIQDKEGIPPD 115
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 116 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 175
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 176 DNVKAKIQDKEGIPPD 191
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 192 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 251
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 252 DNVKAKIQDKEGIPPD 267
Score = 150 bits (379), Expect = 1e-34
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 180
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
Sbjct: 268 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 327
Query: 181 DNVKAKIQDKEGIPPD 228
DNVKAKIQDKEGIPPD
Sbjct: 328 DNVKAKIQDKEGIPPD 343
Score = 79.3 bits (194), Expect = 3e-13
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 112 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 228
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 39
Score = 75.9 bits (185), Expect = 3e-12
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +1
Query: 1 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 111
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 344 QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380