BLASTX nr result

ID: Coptis21_contig00000133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000133
         (2071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF99254.1| galactinol synthase [Coptis japonica]                 665   0.0  
ref|XP_002265947.1| PREDICTED: glycogenin-1 isoform 1 [Vitis vin...   593   e-167
ref|XP_002311774.1| predicted protein [Populus trichocarpa] gi|1...   582   e-163
gb|ACA04029.1| galactinol synthase 1 [Populus trichocarpa x Popu...   581   e-163
gb|ACA04028.1| galactinol synthase 1 [Populus trichocarpa x Popu...   581   e-163

>dbj|BAF99254.1| galactinol synthase [Coptis japonica]
          Length = 336

 Score =  665 bits (1717), Expect = 0.0
 Identities = 319/322 (99%), Positives = 319/322 (99%)
 Frame = +3

Query: 114  MGPAVTVDVFTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLVV 293
            M PAVTVD FT TGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLVV
Sbjct: 1    MAPAVTVDGFTSTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLVV 60

Query: 294  AMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV 473
            AMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV
Sbjct: 61   AMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV 120

Query: 474  YLDADIQVFENIDHLFDTPNGYFFAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEMG 653
            YLDADIQVFENIDHLFDTPNGYFFAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEMG
Sbjct: 121  YLDADIQVFENIDHLFDTPNGYFFAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEMG 180

Query: 654  SPPPLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNLV 833
            SPPPLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNLV
Sbjct: 181  SPPPLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNLV 240

Query: 834  LAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSLD 1013
            LAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSLD
Sbjct: 241  LAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSLD 300

Query: 1014 FKADDSVTNREAFSRPLLLASM 1079
            FKADDSVTNREAFSRPLLLASM
Sbjct: 301  FKADDSVTNREAFSRPLLLASM 322


>ref|XP_002265947.1| PREDICTED: glycogenin-1 isoform 1 [Vitis vinifera]
          Length = 336

 Score =  593 bits (1530), Expect = e-167
 Identities = 275/322 (85%), Positives = 300/322 (93%)
 Frame = +3

Query: 114  MGPAVTVDVFTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLVV 293
            M P V  DVFT  GKV+TLN GYSK AYVTFLAG+GDYVKGVVGLAKGLRKVKSAYPLVV
Sbjct: 1    MAPGVPADVFTAGGKVSTLNAGYSKGAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVV 60

Query: 294  AMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV 473
            AMLPDVPEEHR+IL+SQGCI++EIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV
Sbjct: 61   AMLPDVPEEHREILKSQGCIIREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMV 120

Query: 474  YLDADIQVFENIDHLFDTPNGYFFAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEMG 653
            YLDADIQV++NIDHL D P+GYF+AVMDCFCEKTWSH+PQYSVGYCQQCPDKVTWPAEMG
Sbjct: 121  YLDADIQVYDNIDHLMDAPDGYFYAVMDCFCEKTWSHTPQYSVGYCQQCPDKVTWPAEMG 180

Query: 654  SPPPLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNLV 833
            SPPPLYFNAGMFV+EPSRLT+ESL+  LRIT PT FAEQDFLN FF H+YKPIPLVYNLV
Sbjct: 181  SPPPLYFNAGMFVFEPSRLTYESLLHTLRITPPTAFAEQDFLNMFFQHMYKPIPLVYNLV 240

Query: 834  LAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSLD 1013
            LAMLWRHPENVEL++VKVVHYCAAGSKPWRYTG+EANM+REDIK+LVAKWW++YND SLD
Sbjct: 241  LAMLWRHPENVELDQVKVVHYCAAGSKPWRYTGKEANMEREDIKMLVAKWWDIYNDKSLD 300

Query: 1014 FKADDSVTNREAFSRPLLLASM 1079
            FKA+DSV   E FSRP ++ASM
Sbjct: 301  FKAEDSVPEGEGFSRPSIMASM 322


>ref|XP_002311774.1| predicted protein [Populus trichocarpa] gi|118482705|gb|ABK93271.1|
            unknown [Populus trichocarpa] gi|118488123|gb|ABK95881.1|
            unknown [Populus trichocarpa] gi|167858173|gb|ACA04027.1|
            galactinol synthase 1 [Populus trichocarpa]
            gi|222851594|gb|EEE89141.1| predicted protein [Populus
            trichocarpa]
          Length = 338

 Score =  582 bits (1501), Expect = e-163
 Identities = 274/324 (84%), Positives = 299/324 (92%), Gaps = 2/324 (0%)
 Frame = +3

Query: 114  MGPAVTVDV-FTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLV 290
            M P V +D    GTGKV+T+NTGYSKRAYVTFLAG+GDYVKGVVGLAKGLRKVKSAYPLV
Sbjct: 1    MAPGVPIDGNILGTGKVSTVNTGYSKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLV 60

Query: 291  VAMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM 470
            VA+LPDVPEEHR ILRSQGCI++EIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM
Sbjct: 61   VAILPDVPEEHRDILRSQGCIVREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM 120

Query: 471  VYLDADIQVFENIDHLFDTPNGYFFAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEM 650
            +YLDADIQVFENIDHLFDT +GYF+AVMDCFCEKTWSHSPQYSVGYCQQCP+K+TWPAEM
Sbjct: 121  IYLDADIQVFENIDHLFDTQDGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPEKITWPAEM 180

Query: 651  GSPPPLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNL 830
            GSPPPLYFNAGMFV+EPSRLT+ESL+E L+IT PTPFAEQDFLN FF   YKPIPL+YNL
Sbjct: 181  GSPPPLYFNAGMFVFEPSRLTYESLLERLQITPPTPFAEQDFLNMFFQKTYKPIPLLYNL 240

Query: 831  VLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSL 1010
            VLAMLWRHPENVE+EKVKVVHYCAAGSKPWRYTGEEANMDREDIK+LVAKWW++YND SL
Sbjct: 241  VLAMLWRHPENVEVEKVKVVHYCAAGSKPWRYTGEEANMDREDIKMLVAKWWDIYNDESL 300

Query: 1011 DFKADDSVTNREA-FSRPLLLASM 1079
            DF  ++SV   E  FSR  +L+SM
Sbjct: 301  DFNGENSVPEEETIFSRSSILSSM 324


>gb|ACA04029.1| galactinol synthase 1 [Populus trichocarpa x Populus deltoides]
          Length = 338

 Score =  581 bits (1498), Expect = e-163
 Identities = 275/325 (84%), Positives = 300/325 (92%), Gaps = 3/325 (0%)
 Frame = +3

Query: 114  MGPAVTVD--VFTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPL 287
            M P V +D  +F GTGKV+T+NTGYSKRAYVTFLAG+GDYVKGVVGLAKGLRKVKSAYPL
Sbjct: 1    MAPGVPIDGNIF-GTGKVSTVNTGYSKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPL 59

Query: 288  VVAMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSK 467
            VVA+LPDVPEEHR ILRSQGCI++EIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSK
Sbjct: 60   VVAILPDVPEEHRDILRSQGCIVREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSK 119

Query: 468  MVYLDADIQVFENIDHLFDTPNGYFFAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAE 647
            M+YLDADIQVFENIDHLFDT +GYF+AVMDCFCEKTWSHSPQYSVGYCQQCP+K+TWPAE
Sbjct: 120  MIYLDADIQVFENIDHLFDTQDGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPEKITWPAE 179

Query: 648  MGSPPPLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYN 827
            MGSPPPLYFNAGMFV+EPSRLT+ESL+E L+IT PTPFAEQDFLN FF   YKPIPL+YN
Sbjct: 180  MGSPPPLYFNAGMFVFEPSRLTYESLLERLQITPPTPFAEQDFLNMFFQKTYKPIPLLYN 239

Query: 828  LVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPS 1007
            LVLAMLWRHPENVE+EKVKVVHYCAAGSKPWRYTGEEANMDREDIK+LVAKWW++YND S
Sbjct: 240  LVLAMLWRHPENVEVEKVKVVHYCAAGSKPWRYTGEEANMDREDIKMLVAKWWDIYNDES 299

Query: 1008 LDFKADDSVTNREA-FSRPLLLASM 1079
            LDF  ++SV   E  FSR  +L SM
Sbjct: 300  LDFNGENSVPEEETIFSRSSILFSM 324


>gb|ACA04028.1| galactinol synthase 1 [Populus trichocarpa x Populus deltoides]
          Length = 338

 Score =  581 bits (1497), Expect = e-163
 Identities = 273/324 (84%), Positives = 298/324 (91%), Gaps = 2/324 (0%)
 Frame = +3

Query: 114  MGPAVTVDV-FTGTGKVATLNTGYSKRAYVTFLAGSGDYVKGVVGLAKGLRKVKSAYPLV 290
            M P V +D    GTGKV+T+NTGYSKRAYVTFLAG+GDYVKGVVGLAKGLRKVKSAYPLV
Sbjct: 1    MAPGVPIDGNILGTGKVSTVNTGYSKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLV 60

Query: 291  VAMLPDVPEEHRKILRSQGCILKEIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM 470
            VA+LPDVPEEHR ILRSQGCI++EIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM
Sbjct: 61   VAILPDVPEEHRDILRSQGCIVREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKM 120

Query: 471  VYLDADIQVFENIDHLFDTPNGYFFAVMDCFCEKTWSHSPQYSVGYCQQCPDKVTWPAEM 650
            +YLDADIQVFENIDHLFDT +GYF+AVMDCFCEKTWSHSPQYSVGYCQQCP+K+TWPAEM
Sbjct: 121  IYLDADIQVFENIDHLFDTQDGYFYAVMDCFCEKTWSHSPQYSVGYCQQCPEKITWPAEM 180

Query: 651  GSPPPLYFNAGMFVYEPSRLTFESLIENLRITAPTPFAEQDFLNKFFNHVYKPIPLVYNL 830
            GSPPPLYFNAGMFV+EPSRLT+ESL+E L+IT PTPFAEQDFLN FF   YKPIPL+YNL
Sbjct: 181  GSPPPLYFNAGMFVFEPSRLTYESLLERLQITPPTPFAEQDFLNMFFQKTYKPIPLLYNL 240

Query: 831  VLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGEEANMDREDIKVLVAKWWEVYNDPSL 1010
            VLAMLWRHPENVE+EKVKVVHYCAAGSKPWRYTGEEANMDREDIK+LVAKWW++YND SL
Sbjct: 241  VLAMLWRHPENVEVEKVKVVHYCAAGSKPWRYTGEEANMDREDIKMLVAKWWDIYNDESL 300

Query: 1011 DFKADDSVTNREA-FSRPLLLASM 1079
            DF  ++S    E  FSR  +L+SM
Sbjct: 301  DFNGENSAPEEETIFSRSSILSSM 324


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