BLASTX nr result
ID: Coptis21_contig00000112
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000112
(1662 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 591 e-166
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera] 591 e-166
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 553 e-155
ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putativ... 545 e-152
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2... 528 e-147
>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
product [Vitis vinifera]
Length = 489
Score = 591 bits (1523), Expect = e-166
Identities = 302/451 (66%), Positives = 351/451 (77%), Gaps = 3/451 (0%)
Frame = +1
Query: 1 ENFPLFSKKS---KPILTPTSNSQTPISHIPKTLEXXXXXXXXXXXXXXXLNLADWALET 171
ENFPLFSK+ KP T+ +Q P P T L LA+WA++
Sbjct: 9 ENFPLFSKRKPTPKPSKNSTTTAQNPNPEQPLT---RTTNPTSPSSTFADLGLAEWAVQA 65
Query: 172 CKELGLIKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQRLAENRYGVYALVI 351
CKELG+ +PTPVQ HCIP+ILAG+DVLGLA+TGSGKTAAFALPIL RLAE+ +GV+ALV+
Sbjct: 66 CKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAEDPFGVFALVV 125
Query: 352 TPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIATPGRIKVLIE 531
TPTRELA+QLA+QF+ALGS L LRC+V+VGGMDMI Q + LM RPHV+IATPGR+KVL+E
Sbjct: 126 TPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIATPGRVKVLLE 185
Query: 532 QNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSATMTENLQTLL 711
QNPDI AVF RTKFLVLDEADRVLDVGFEEELRV+F+CLP+NRQTLLFSATMT +LQTLL
Sbjct: 186 QNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLL 245
Query: 712 ELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIRSAIVFVSKC 891
ELS+NKAYFY+AYEG +TVESLKQQY+F+P+N+KDVYLLHILSKME+MGIRSAI+FVS C
Sbjct: 246 ELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRSAIIFVSTC 305
Query: 892 KTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALHRFKSGQVPVLLATDVASRGLDIPTVD 1071
++C RL+A+HRFKSGQVP+LLATDVASRGLDIPTVD
Sbjct: 306 RSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASRGLDIPTVD 365
Query: 1072 LVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKKQLEKFECKE 1251
LV+NYDIPR+ DY S+VTQNDVDLIHEIEA KQL+KF+CKE
Sbjct: 366 LVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQLDKFDCKE 425
Query: 1252 NEVLANITKVYKARRISAMKMRDDGFEEKAK 1344
EVL NITKVYKARR++ MKM DDGFEEKAK
Sbjct: 426 KEVLDNITKVYKARRVATMKMMDDGFEEKAK 456
>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
Length = 592
Score = 591 bits (1523), Expect = e-166
Identities = 302/451 (66%), Positives = 351/451 (77%), Gaps = 3/451 (0%)
Frame = +1
Query: 1 ENFPLFSKKS---KPILTPTSNSQTPISHIPKTLEXXXXXXXXXXXXXXXLNLADWALET 171
ENFPLFSK+ KP T+ +Q P P T L LA+WA++
Sbjct: 112 ENFPLFSKRKPTPKPSKNSTTTAQNPNPEQPLT---RTTNPTSPSSTFADLGLAEWAVQA 168
Query: 172 CKELGLIKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQRLAENRYGVYALVI 351
CKELG+ +PTPVQ HCIP+ILAG+DVLGLA+TGSGKTAAFALPIL RLAE+ +GV+ALV+
Sbjct: 169 CKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLAEDPFGVFALVV 228
Query: 352 TPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIATPGRIKVLIE 531
TPTRELA+QLA+QF+ALGS L LRC+V+VGGMDMI Q + LM RPHV+IATPGR+KVL+E
Sbjct: 229 TPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVIATPGRVKVLLE 288
Query: 532 QNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSATMTENLQTLL 711
QNPDI AVF RTKFLVLDEADRVLDVGFEEELRV+F+CLP+NRQTLLFSATMT +LQTLL
Sbjct: 289 QNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFSATMTSDLQTLL 348
Query: 712 ELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIRSAIVFVSKC 891
ELS+NKAYFY+AYEG +TVESLKQQY+F+P+N+KDVYLLHILSKME+MGIRSAI+FVS C
Sbjct: 349 ELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMGIRSAIIFVSTC 408
Query: 892 KTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALHRFKSGQVPVLLATDVASRGLDIPTVD 1071
++C RL+A+HRFKSGQVP+LLATDVASRGLDIPTVD
Sbjct: 409 RSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDVASRGLDIPTVD 468
Query: 1072 LVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKKQLEKFECKE 1251
LV+NYDIPR+ DY S+VTQNDVDLIHEIEA KQL+KF+CKE
Sbjct: 469 LVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLGKQLDKFDCKE 528
Query: 1252 NEVLANITKVYKARRISAMKMRDDGFEEKAK 1344
EVL NITKVYKARR++ MKM DDGFEEKAK
Sbjct: 529 KEVLDNITKVYKARRVATMKMMDDGFEEKAK 559
>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
sativus]
Length = 491
Score = 553 bits (1426), Expect = e-155
Identities = 289/453 (63%), Positives = 338/453 (74%), Gaps = 5/453 (1%)
Frame = +1
Query: 4 NFPLFSK----KSKPILTPTS-NSQTPISHIPKTLEXXXXXXXXXXXXXXXLNLADWALE 168
NFPLFSK K KP PT+ + P + L L++W ++
Sbjct: 10 NFPLFSKPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELTTKSTNNITFADLGLSEWIIQ 69
Query: 169 TCKELGLIKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQRLAENRYGVYALV 348
TCKEL + KPT VQ HCIPKILAG DVLG+A+TGSGKTAAFALPILQRL+E +GV+ALV
Sbjct: 70 TCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSETPFGVFALV 129
Query: 349 ITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIATPGRIKVLI 528
+TPTRELA+QLA+QF+ALGS L+LRCSV+VGGMDM+ Q + L+ RPH++IATPGRIKVL+
Sbjct: 130 VTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRIKVLL 189
Query: 529 EQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSATMTENLQTL 708
E NPDI VF +TKFLVLDEADRVLDVGFEEEL+VIF+CLP NRQTLLFSATMT++L+TL
Sbjct: 190 EDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSATMTKDLETL 249
Query: 709 LELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIRSAIVFVSK 888
+LSANKAYFY+AYEG +TV+ LKQQY+FIP+++KD+YLLH+LSKMEDMGIRSAI+FV
Sbjct: 250 HKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSKMEDMGIRSAIIFVQT 309
Query: 889 CKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALHRFKSGQVPVLLATDVASRGLDIPTV 1068
CK+C RL+AL+RFKSG+VPVLLATDVASRGLDIPTV
Sbjct: 310 CKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVLLATDVASRGLDIPTV 369
Query: 1069 DLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKKQLEKFECK 1248
DLVINYDIPR DY S +TQNDV LIHEIEAN KQLE FECK
Sbjct: 370 DLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLGKQLEIFECK 429
Query: 1249 ENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1347
ENEVL NITKVYKAR ++ MKM D GFEEK KE
Sbjct: 430 ENEVLENITKVYKARHVAKMKMVDGGFEEKVKE 462
>ref|XP_002513358.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547266|gb|EEF48761.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 502
Score = 545 bits (1404), Expect = e-152
Identities = 280/460 (60%), Positives = 339/460 (73%), Gaps = 11/460 (2%)
Frame = +1
Query: 1 ENFPLFSKKSK---------PILTPTSNSQTPISHIPKTLEXXXXXXXXXXXXXXXLNL- 150
+NFPLF K SK P P + ++ PK + NL
Sbjct: 10 KNFPLFFKPSKTHKPLQTIKPPKAPKTQNRKNDLETPKIEKEKSTNSITMDETSLFSNLG 69
Query: 151 -ADWALETCKELGLIKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQRLAENR 327
A+WA+ TCKELG+ +PTPVQ HCIPKIL G DVLGLA+TGSGKTA FALPIL RLAE+
Sbjct: 70 LAEWAVRTCKELGMKRPTPVQAHCIPKILEGKDVLGLAQTGSGKTATFALPILHRLAEDP 129
Query: 328 YGVYALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIATP 507
YG++ALVITPTRELA+QLA+QF+ALGS L+LRC+V+VGGMD + Q K LM+RPHV+IATP
Sbjct: 130 YGIFALVITPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDKLTQAKTLMARPHVVIATP 189
Query: 508 GRIKVLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSATM 687
GR+KVL+E NPDI +VF +TKFLVLDEADRVLDVGFE+ELRV+F+CLP+NRQTLLFSATM
Sbjct: 190 GRVKVLLEDNPDIPSVFSKTKFLVLDEADRVLDVGFEDELRVVFQCLPKNRQTLLFSATM 249
Query: 688 TENLQTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIRS 867
T NL++LLE+SANKAYFY+AYEG +TV++LKQQY+ +P+N+KDVYL++ILSKMEDMGIRS
Sbjct: 250 TSNLESLLEVSANKAYFYEAYEGFKTVDTLKQQYVLVPKNVKDVYLVYILSKMEDMGIRS 309
Query: 868 AIVFVSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALHRFKSGQVPVLLATDVASR 1047
AI+FVS C+TC RLSAL RFKSGQ +L+ATDVASR
Sbjct: 310 AIIFVSTCRTCYLLSLLLEELEKEPAALHSFKSQSLRLSALRRFKSGQASILIATDVASR 369
Query: 1048 GLDIPTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKKQ 1227
GLDIPTVDLV+NYD+PR+ DY S ++QND LI EIEA KQ
Sbjct: 370 GLDIPTVDLVVNYDLPRYPRDYVHRVGRTARAGRGGLAMSFISQNDFVLIREIEAVLGKQ 429
Query: 1228 LEKFECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1347
L +FECKENEVL++ITK++KAR ++ MKM DDGFEEK KE
Sbjct: 430 LGEFECKENEVLSDITKIFKARHVATMKMLDDGFEEKEKE 469
>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
predicted protein [Populus trichocarpa]
Length = 496
Score = 528 bits (1361), Expect = e-147
Identities = 280/456 (61%), Positives = 333/456 (73%), Gaps = 8/456 (1%)
Frame = +1
Query: 4 NFPLFSKKSK-PILTPTSN-SQTPISHIPKTLEXXXXXXXXXXXXXXX------LNLADW 159
NFPLFSK K P L T N ++P IPK + L L++W
Sbjct: 15 NFPLFSKTPKRPKLQKTQNPDESP--EIPKLEKEASSNPSNPDSAAAKTTLFSDLGLSEW 72
Query: 160 ALETCKELGLIKPTPVQQHCIPKILAGNDVLGLAETGSGKTAAFALPILQRLAENRYGVY 339
AL+TCKELG+ PT VQ HCIPKIL+G DVLGLA+TGSGKTAAFALPIL RLAE+ +GV+
Sbjct: 73 ALQTCKELGMKNPTQVQSHCIPKILSGRDVLGLAQTGSGKTAAFALPILHRLAEDPFGVF 132
Query: 340 ALVITPTRELAFQLADQFKALGSSLSLRCSVIVGGMDMIEQGKVLMSRPHVIIATPGRIK 519
ALVITPTRELA+QLA+QF+A GS L LRC+V+VGGMD++ Q K LM RPHV+IATPGRIK
Sbjct: 133 ALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTLMGRPHVVIATPGRIK 192
Query: 520 VLIEQNPDIEAVFKRTKFLVLDEADRVLDVGFEEELRVIFKCLPENRQTLLFSATMTENL 699
VL+E NPDI VF RTKFLVLDEADR++DVGF+EELRV+FKCLP++RQTLLFSATMT L
Sbjct: 193 VLLE-NPDISPVFSRTKFLVLDEADRLIDVGFQEELRVVFKCLPKSRQTLLFSATMTSEL 251
Query: 700 QTLLELSANKAYFYQAYEGVRTVESLKQQYLFIPENLKDVYLLHILSKMEDMGIRSAIVF 879
QTLLELS NKAYFY+ YEG +TV++L QQY+ +P+N+K+VYL++ILSKME+MGIRSAI+F
Sbjct: 252 QTLLELSENKAYFYEEYEGFKTVDTLNQQYIQMPKNVKEVYLVYILSKMEEMGIRSAIIF 311
Query: 880 VSKCKTCXXXXXXXXXXXXXXXXXXXXXXXXXRLSALHRFKSGQVPVLLATDVASRGLDI 1059
VS C TC RL++LHRFKSGQ +L+ATD+ASRGLDI
Sbjct: 312 VSACSTCRLLSSLLKELDHEPATLYSLESQSARLASLHRFKSGQASILIATDLASRGLDI 371
Query: 1060 PTVDLVINYDIPRHSEDYXXXXXXXXXXXXXXXXXSLVTQNDVDLIHEIEANTKKQLEKF 1239
PTVDLVINYD+PR DY SLV Q+D L+ IEA KQ EKF
Sbjct: 372 PTVDLVINYDLPRDPTDYVHRVGRTARAGREGLAVSLVAQHDGKLMKAIEAEVGKQFEKF 431
Query: 1240 ECKENEVLANITKVYKARRISAMKMRDDGFEEKAKE 1347
ECKENEVL++ITKVYKARR++ MKM DDGF+E KE
Sbjct: 432 ECKENEVLSDITKVYKARRVAKMKMMDDGFDELVKE 467