BLASTX nr result

ID: Coptis21_contig00000080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000080
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62484.1| hypothetical protein VITISV_010812 [Vitis vinifera]   120   2e-25
ref|XP_002283737.1| PREDICTED: COMM domain-containing protein 9 ...   119   3e-25
ref|XP_002511192.1| COMM domain-containing protein, putative [Ri...   109   4e-22
ref|XP_003523144.1| PREDICTED: uncharacterized protein LOC100781...    92   5e-17
ref|XP_003526960.1| PREDICTED: COMM domain-containing protein 9-...    92   9e-17

>emb|CAN62484.1| hypothetical protein VITISV_010812 [Vitis vinifera]
          Length = 239

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/89 (66%), Positives = 72/89 (80%)
 Frame = +1

Query: 1   QVTIPRLKTMTWNLANQETELAEPLAIINLKLHDDAQPNAGETEVKIQFDKDDLETMVKS 180
           QV +PRLK MTWN+ANQETE+ +P+A+INLKL +DAQ ++GE EVK Q DKD LETM+KS
Sbjct: 51  QVIMPRLKAMTWNMANQETEMLDPVAVINLKLQNDAQSHSGELEVKFQLDKDTLETMLKS 110

Query: 181 MYCIRDQFSDMDETSNGNRQPQETTTPTV 267
           MY IRDQ SD+ ETSNG+  P+ET T  V
Sbjct: 111 MYSIRDQLSDVGETSNGH-LPEETNTCVV 138


>ref|XP_002283737.1| PREDICTED: COMM domain-containing protein 9 [Vitis vinifera]
           gi|297734414|emb|CBI15661.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  119 bits (299), Expect = 3e-25
 Identities = 58/86 (67%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   QVTIPRLKTMTWNLANQETELAEPLAIINLKLHDDAQPNAGETEVKIQFDKDDLETMVKS 180
           QV +PRLK MTWN+ANQETE+ +P+A+INLKL +DAQ ++GE EVK Q DKD LETM+KS
Sbjct: 115 QVIMPRLKAMTWNMANQETEMLDPVAVINLKLQNDAQSHSGELEVKFQLDKDTLETMLKS 174

Query: 181 MYCIRDQFSDMDETSNGNRQPQETTT 258
           MY IRDQ SD+ ETSNG+  P+ET T
Sbjct: 175 MYSIRDQLSDVGETSNGH-LPEETNT 199


>ref|XP_002511192.1| COMM domain-containing protein, putative [Ricinus communis]
           gi|223550307|gb|EEF51794.1| COMM domain-containing
           protein, putative [Ricinus communis]
          Length = 201

 Score =  109 bits (272), Expect = 4e-22
 Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   QVTIPRLKTMTWNLANQET-ELAEPLAIINLKLHDDAQPNAGETEVKIQFDKDDLETMVK 177
           QVT PRLK MTWN+ANQ+T E+ EP+A+INLKL +DA   +GE EVK Q  KD LETMVK
Sbjct: 115 QVTFPRLKAMTWNMANQDTAEMTEPMAVINLKLQNDAPSQSGELEVKFQLAKDTLETMVK 174

Query: 178 SMYCIRDQFSDMDETSNGNRQPQETT 255
           SMYCIRDQ SD+D  S G    +  T
Sbjct: 175 SMYCIRDQLSDIDGASKGQLSLESNT 200


>ref|XP_003523144.1| PREDICTED: uncharacterized protein LOC100781168 [Glycine max]
          Length = 192

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 41/78 (52%), Positives = 59/78 (75%)
 Frame = +1

Query: 1   QVTIPRLKTMTWNLANQETELAEPLAIINLKLHDDAQPNAGETEVKIQFDKDDLETMVKS 180
           Q  +P+LKTMTWN+AN + E A+P A+INLKL +DA  ++GE ++K Q   D ++ M+K+
Sbjct: 115 QTIVPQLKTMTWNMANLDKESADPAAVINLKLQNDALFHSGEQDMKFQLATDSIDMMLKA 174

Query: 181 MYCIRDQFSDMDETSNGN 234
           M+CIRDQFS +DE  NG+
Sbjct: 175 MHCIRDQFSTVDEALNGH 192


>ref|XP_003526960.1| PREDICTED: COMM domain-containing protein 9-like [Glycine max]
          Length = 192

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/78 (52%), Positives = 58/78 (74%)
 Frame = +1

Query: 1   QVTIPRLKTMTWNLANQETELAEPLAIINLKLHDDAQPNAGETEVKIQFDKDDLETMVKS 180
           Q  +PRLK MTWN+AN + E A+P A+INLKL +D Q ++GE +VK +   D ++ M+K+
Sbjct: 115 QNIVPRLKAMTWNMANLDKESADPAAVINLKLQNDGQFHSGEQDVKFKLATDSIDMMLKA 174

Query: 181 MYCIRDQFSDMDETSNGN 234
           M+CIRDQFS +DE  NG+
Sbjct: 175 MHCIRDQFSTVDEALNGH 192


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