BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000071
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]...   117   3e-24
ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane prot...   104   2e-20
ref|XP_003529495.1| PREDICTED: mitochondrial inner membrane prot...   103   4e-20
ref|XP_003622394.1| Mitochondrial inner membrane protein OXA1 [M...   103   4e-20
ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arab...   100   4e-19

>ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]
           gi|222845234|gb|EEE82781.1| inner membrane protein
           [Populus trichocarpa]
          Length = 459

 Score =  117 bits (292), Expect = 3e-24
 Identities = 79/194 (40%), Positives = 103/194 (53%), Gaps = 1/194 (0%)
 Frame = +2

Query: 119 MAYRRSLSIRVGLLRQRFNPSFTYILHDDDDKCQSSAADISRXXXXXXXXXXXXXXXXXX 298
           MAY RSLS R  ++R+R+N SF+YILHDDD K  S     S                   
Sbjct: 1   MAYVRSLSTRANIVRRRYNASFSYILHDDDRKHNSIEEGPSSKGMSNLFQQRSFGSSRKR 60

Query: 299 XXXXXXXXXXXXXRGYHNSSMTSASAGIDSLFRRNGYXXXXXXXXXXXXNYSSNAIGEEA 478
                        R   + S+ S S G+   F R+                  + IG  +
Sbjct: 61  FDNNLAVFGFFHNRRCLDLSL-SPSIGVS--FCRD-----------------MSTIGGGS 100

Query: 479 DKIEEYLNGVTEIISEKSVEVVS-QVPAVSEVAIAAADSYFPVAALQYIIDGVHSFTGLN 655
           + IE  +N V +++++ + E VS Q P V+EVAIAAADSYFPVAALQ++ID VHSFTG N
Sbjct: 101 ENIE-LINDVADVLTDTTFEAVSAQAPVVNEVAIAAADSYFPVAALQHVIDAVHSFTGFN 159

Query: 656 WWASIALTTLMIRG 697
           WWASI +TTL+IRG
Sbjct: 160 WWASIIVTTLLIRG 173


>ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
           max]
          Length = 431

 Score =  104 bits (259), Expect = 2e-20
 Identities = 69/194 (35%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
 Frame = +2

Query: 119 MAYRRSLSIRVGLLRQRFNPSFTYILHDDDDKCQSSAADISRXXXXXXXXXXXXXXXXXX 298
           MAYRR L IR  L+ +R +PSF+Y+LH D  K +++    S                   
Sbjct: 1   MAYRRCLLIRGNLVDRRCHPSFSYVLHSDQGKHENTNEKSSSGGDGDFT----------- 49

Query: 299 XXXXXXXXXXXXXRGYHNSSMTSASAGIDSLFRRNGYXXXXXXXXXXXXNYSSNAIGEEA 478
                              S  S+  G    F  +               Y S  + + +
Sbjct: 50  ----------------QTRSFGSSLNGPMGFFAHSRDRFLSPCSRYGFCRYMST-VNQGS 92

Query: 479 DKIE-EYLNGVTEIISEKSVE-VVSQVPAVSEVAIAAADSYFPVAALQYIIDGVHSFTGL 652
           DKI  + +  V ++++  +++ VVSQ P V+EVAIAAADS+ PV ALQY+ID VHS+TGL
Sbjct: 93  DKISSDVMTDVADVLTNTTMDAVVSQAPVVNEVAIAAADSFLPVQALQYVIDAVHSYTGL 152

Query: 653 NWWASIALTTLMIR 694
           NWWA+I LTTL+IR
Sbjct: 153 NWWAAIVLTTLLIR 166


>ref|XP_003529495.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
           max]
          Length = 430

 Score =  103 bits (256), Expect = 4e-20
 Identities = 74/205 (36%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
 Frame = +2

Query: 119 MAYRRSLSIRVGLLRQRFNPSFTYILHDDDDKCQ-----SSAADISRXXXXXXXXXXXXX 283
           MA+RR L IR  L+ ++ +PSF+Y+LH ++ K +     SS+A IS              
Sbjct: 1   MAHRRCLLIRGNLMNRKCHPSFSYVLHSNEGKRECPDEKSSSAGISNSIQR--------- 51

Query: 284 XXXXXXXXXXXXXXXXXXRGYHNSSMTSASAGIDSLFRRNGYXXXXXXXXXXXXNYSS-- 457
                             R + NS        +D   R   Y             YS   
Sbjct: 52  ------------------RMFGNS--------VDGSMRFVSYSGQRMHSNRFLSPYSGYN 85

Query: 458 -----NAIGEEADKIEEYLNGVTEIISEKSVEVV-SQVPAVSEVAIAAADSYFPVAALQY 619
                + + + +DKI+  +  + +++ + +VE V SQ P V EVAIAAADS  PV ALQY
Sbjct: 86  FCRHMSTVNQGSDKID-IMTDIADVLKDTTVEAVTSQAPIVKEVAIAAADSALPVKALQY 144

Query: 620 IIDGVHSFTGLNWWASIALTTLMIR 694
           IID VHS+TGLNWWASI LTTL+IR
Sbjct: 145 IIDAVHSYTGLNWWASIVLTTLLIR 169


>ref|XP_003622394.1| Mitochondrial inner membrane protein OXA1 [Medicago truncatula]
           gi|355497409|gb|AES78612.1| Mitochondrial inner membrane
           protein OXA1 [Medicago truncatula]
          Length = 446

 Score =  103 bits (256), Expect = 4e-20
 Identities = 69/195 (35%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
 Frame = +2

Query: 119 MAYRRSLSIR-VGLLRQRFNPSFTYILHDDDDKCQSSAADISRXXXXXXXXXXXXXXXXX 295
           MAYRR L  R   L+ +R NPSFTYILH DD+  Q    D +                  
Sbjct: 1   MAYRRCLLQRGKNLIDRRCNPSFTYILHSDDEGKQRDQPDSAGRISNSFTQTRSFGFGNS 60

Query: 296 XXXXXXXXXXXXXXRGYHNSSMTSASAGIDSLFRRNGYXXXXXXXXXXXXNYSSNAIGEE 475
                          GY+N+   + S   D  F                           
Sbjct: 61  LNGSMGFSPSSPFAAGYYNNFCRNMSTTPDQGF--------------------------- 93

Query: 476 ADKIEEYLNGVTEIISEKSVEVVSQ--VPAVSEVAIAAADSYFPVAALQYIIDGVHSFTG 649
            DKI E    V  ++S+ +V+ +S    P VSEVAIAAADS+ PV  LQY ID VH++TG
Sbjct: 94  -DKITELTTDVAHVLSDTAVDAISSQAAPVVSEVAIAAADSFLPVQVLQYAIDAVHTYTG 152

Query: 650 LNWWASIALTTLMIR 694
           LNWW++I +TTL+IR
Sbjct: 153 LNWWSAIVVTTLLIR 167


>ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp.
           lyrata] gi|297326081|gb|EFH56501.1| hypothetical protein
           ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score =  100 bits (248), Expect = 4e-19
 Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 4/87 (4%)
 Frame = +2

Query: 449 YSSNAIGEEADKIEEYLNGVTEIISEKSVEVVSQ----VPAVSEVAIAAADSYFPVAALQ 616
           Y S+   E +DK++      TE++ ++ +E V+     VPA++EVAIAAADS FPVAALQ
Sbjct: 84  YMSSTPPEWSDKVDGIDFVATEVVPDEIIEAVTTTSQAVPAINEVAIAAADSAFPVAALQ 143

Query: 617 YIIDGVHSFTGLNWWASIALTTLMIRG 697
           ++IDGVHSFTGLNWWASIALTT++IRG
Sbjct: 144 HLIDGVHSFTGLNWWASIALTTVLIRG 170