BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000030
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566192.1| putative NADH dehydrogenase [ubiquinone] 1 alph...   277   3e-72
ref|XP_002884359.1| NADH:ubiquinone oxidoreductase family protei...   275   8e-72
ref|NP_001030628.1| putative NADH dehydrogenase [ubiquinone] 1 a...   275   1e-71
gb|ACJ85918.1| unknown [Medicago truncatula] gi|388519711|gb|AFK...   271   1e-70
ref|XP_004170050.1| PREDICTED: probable NADH dehydrogenase [ubiq...   271   1e-70

>ref|NP_566192.1| putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           12 [Arabidopsis thaliana]
           gi|12644540|sp|Q9M9M9.1|NDUAC_ARATH RecName:
           Full=Probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 12
           gi|6714426|gb|AAF26114.1|AC012328_17 unknown protein
           [Arabidopsis thaliana]
           gi|13878173|gb|AAK44164.1|AF370349_1 unknown protein
           [Arabidopsis thaliana] gi|17104529|gb|AAL34153.1|
           unknown protein [Arabidopsis thaliana]
           gi|21593289|gb|AAM65238.1| probable NADH-ubiquinone
           oxidoreductase subunit B17.2 (Complex I-B17.2)
           (CI-B17.2) [Arabidopsis thaliana]
           gi|332640380|gb|AEE73901.1| putative NADH dehydrogenase
           [ubiquinone] 1 alpha subcomplex subunit 12 [Arabidopsis
           thaliana]
          Length = 159

 Score =  277 bits (708), Expect = 3e-72
 Identities = 121/154 (78%), Positives = 140/154 (90%), Gaps = 1/154 (0%)
 Frame = +3

Query: 90  IAKSAVNMIREKGIGGFFKEIKQEGFLRCLPDGNLLQTKIHNIGSTLVGIDKFGNKYYEK 269
           +AKSA+  IREKG+GGF + I++EGF+RCLPDGNLLQTKIHNIG+TLVG+DKFGNKYY+K
Sbjct: 5   VAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK 64

Query: 270 L-NVQYGRHRWVEYGDKTRYNASQVPAEWHGWLHYVTDHTGDELLMLKPIRYGIDHKQNF 446
           L + QYGRHRWVEY  K RYNASQVPAEWHGWLH++TDHTGDELL LKP RYG++HK+NF
Sbjct: 65  LGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKENF 124

Query: 447 SGEGDEYIYHSKGHALNPGQKDWTRYQSWKPTQS 548
           SGEGD YIYHSKGH LNPGQK+WTRYQSW PT++
Sbjct: 125 SGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158


>ref|XP_002884359.1| NADH:ubiquinone oxidoreductase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330199|gb|EFH60618.1|
           NADH:ubiquinone oxidoreductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score =  275 bits (704), Expect = 8e-72
 Identities = 121/154 (78%), Positives = 139/154 (90%), Gaps = 1/154 (0%)
 Frame = +3

Query: 90  IAKSAVNMIREKGIGGFFKEIKQEGFLRCLPDGNLLQTKIHNIGSTLVGIDKFGNKYYEK 269
           +AKSA+  IREKG+GG  + I++EGFLRCLPDGNLLQTKIHNIG+TLVG+DKFGNKYY+K
Sbjct: 5   VAKSALEAIREKGLGGLMRMIREEGFLRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK 64

Query: 270 L-NVQYGRHRWVEYGDKTRYNASQVPAEWHGWLHYVTDHTGDELLMLKPIRYGIDHKQNF 446
           L + QYGRHRWVEY  K RYNASQVPAEWHGWLH++TDHTGDELL LKP RYG++HK+NF
Sbjct: 65  LGDTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKENF 124

Query: 447 SGEGDEYIYHSKGHALNPGQKDWTRYQSWKPTQS 548
           SGEGD YIYHSKGH LNPGQK+WTRYQSW PT++
Sbjct: 125 SGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158


>ref|NP_001030628.1| putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           12 [Arabidopsis thaliana] gi|332640381|gb|AEE73902.1|
           putative NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 12 [Arabidopsis thaliana]
          Length = 159

 Score =  275 bits (702), Expect = 1e-71
 Identities = 120/154 (77%), Positives = 139/154 (90%), Gaps = 1/154 (0%)
 Frame = +3

Query: 90  IAKSAVNMIREKGIGGFFKEIKQEGFLRCLPDGNLLQTKIHNIGSTLVGIDKFGNKYYEK 269
           +AKSA+  IREKG+GGF + I++EGF+RCLPDGNLLQTKIHNIG+TLVG+DKFGNKYY+K
Sbjct: 5   VAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK 64

Query: 270 L-NVQYGRHRWVEYGDKTRYNASQVPAEWHGWLHYVTDHTGDELLMLKPIRYGIDHKQNF 446
           L + QYG HRWVEY  K RYNASQVPAEWHGWLH++TDHTGDELL LKP RYG++HK+NF
Sbjct: 65  LGDTQYGMHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKENF 124

Query: 447 SGEGDEYIYHSKGHALNPGQKDWTRYQSWKPTQS 548
           SGEGD YIYHSKGH LNPGQK+WTRYQSW PT++
Sbjct: 125 SGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158


>gb|ACJ85918.1| unknown [Medicago truncatula] gi|388519711|gb|AFK47917.1| unknown
           [Medicago truncatula]
          Length = 159

 Score =  271 bits (694), Expect = 1e-70
 Identities = 115/152 (75%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
 Frame = +3

Query: 90  IAKSAVNMIREKGIGGFFKEIKQEGFLRCLPDGNLLQTKIHNIGSTLVGIDKFGNKYYEK 269
           + KS +N ++EKG+GGFF+ +K EG+LRCLPDGNLLQTKIHNIG+TLVG+DK+GNKYYEK
Sbjct: 5   VVKSILNTVKEKGLGGFFRHLKDEGYLRCLPDGNLLQTKIHNIGATLVGVDKYGNKYYEK 64

Query: 270 L-NVQYGRHRWVEYGDKTRYNASQVPAEWHGWLHYVTDHTGDELLMLKPIRYGIDHKQNF 446
             N QYGRHRWVEY +K+RYNASQVPAEWHGWLH++TDHTGDELL+LKP RYG+DHK+N 
Sbjct: 65  TENTQYGRHRWVEYAEKSRYNASQVPAEWHGWLHFITDHTGDELLLLKPKRYGLDHKENL 124

Query: 447 SGEGDEYIYHSKGHALNPGQKDWTRYQSWKPT 542
           SG G+E+IYHSKGHALNPGQ++WTRYQ W+ T
Sbjct: 125 SGHGEEFIYHSKGHALNPGQRNWTRYQPWQST 156


>ref|XP_004170050.1| PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 12-like [Cucumis sativus]
          Length = 158

 Score =  271 bits (693), Expect = 1e-70
 Identities = 116/158 (73%), Positives = 142/158 (89%), Gaps = 2/158 (1%)
 Frame = +3

Query: 81  LVKIAKSAVNMIREKGIGGFFKEIKQEGFLRCLPDGNLLQTKIHNIGSTLVGIDKFGNKY 260
           +  + +  +  I++KGIG F++E+K+EG+L+CLPDGNLLQTKIHNIG+TLVG+DKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 261 YEKLN--VQYGRHRWVEYGDKTRYNASQVPAEWHGWLHYVTDHTGDELLMLKPIRYGIDH 434
           Y+K++   QYGRHRWVEY +K RYNASQVP EWHGWLH++TDHTGDELLMLKP RYGI+H
Sbjct: 61  YQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 435 KQNFSGEGDEYIYHSKGHALNPGQKDWTRYQSWKPTQS 548
           K+NFSGEG+E IYHSKGHALNPGQ+DWTRYQSW+PT+S
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158