BLASTX nr result

ID: Cocculus23_contig00061343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00061343
         (259 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA54467.1| TPA: hypothetical protein ZEAMMB73_770856 [Zea m...    60   3e-07
ref|XP_002455574.1| hypothetical protein SORBIDRAFT_03g013330 [S...    60   3e-07
ref|XP_004971779.1| PREDICTED: polygalacturonase At1g48100-like ...    55   1e-05
ref|XP_002455572.1| hypothetical protein SORBIDRAFT_03g013310 [S...    55   1e-05

>tpg|DAA54467.1| TPA: hypothetical protein ZEAMMB73_770856 [Zea mays]
          Length = 367

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 23/30 (76%), Positives = 27/30 (90%)
 Frame = +3

Query: 84  GDDCISIGTGCSDVNIENITCEHSHGIRYI 173
           GDDC+SIG GCSDV++ENITC H HGIRY+
Sbjct: 136 GDDCVSIGAGCSDVHVENITCGHGHGIRYL 165


>ref|XP_002455574.1| hypothetical protein SORBIDRAFT_03g013330 [Sorghum bicolor]
           gi|241927549|gb|EES00694.1| hypothetical protein
           SORBIDRAFT_03g013330 [Sorghum bicolor]
          Length = 548

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 23/30 (76%), Positives = 27/30 (90%)
 Frame = +3

Query: 84  GDDCISIGTGCSDVNIENITCEHSHGIRYI 173
           GDDC+SIG GCSDV++ENITC H HGIRY+
Sbjct: 324 GDDCVSIGAGCSDVHVENITCGHGHGIRYL 353


>ref|XP_004971779.1| PREDICTED: polygalacturonase At1g48100-like [Setaria italica]
          Length = 521

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +3

Query: 84  GDDCISIGTGCSDVNIENITCEHSHGI 164
           GDDC+SIG GCSDV+IENITC H HGI
Sbjct: 321 GDDCVSIGAGCSDVHIENITCGHGHGI 347


>ref|XP_002455572.1| hypothetical protein SORBIDRAFT_03g013310 [Sorghum bicolor]
           gi|241927547|gb|EES00692.1| hypothetical protein
           SORBIDRAFT_03g013310 [Sorghum bicolor]
          Length = 693

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +3

Query: 84  GDDCISIGTGCSDVNIENITCEHSHGI 164
           GDDC+SIG GCSDV+IENITC H HGI
Sbjct: 490 GDDCVSIGAGCSDVHIENITCGHGHGI 516


Top