BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00061320
         (254 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347656.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
ref|XP_004305694.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
gb|EYU23732.1| hypothetical protein MIMGU_mgv1a024961mg [Mimulus...    79   5e-13
ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containi...    76   5e-12
ref|XP_006827023.1| hypothetical protein AMTR_s00010p00221030 [A...    73   5e-11
ref|XP_007032755.1| Pentatricopeptide repeat superfamily protein...    71   1e-10
ref|XP_002516308.1| pentatricopeptide repeat-containing protein,...    71   2e-10
ref|XP_006581772.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|XP_003602633.1| Pentatricopeptide repeat-containing protein ...    68   1e-09
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...    68   1e-09
ref|XP_007137793.1| hypothetical protein PHAVU_009G155900g [Phas...    67   2e-09
ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
gb|EPS69323.1| hypothetical protein M569_05443, partial [Genlise...    67   3e-09
ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prun...    64   2e-08
ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Caps...    62   6e-08
ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Caps...    62   6e-08
ref|XP_004491510.1| PREDICTED: putative pentatricopeptide repeat...    62   8e-08
ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07

>ref|XP_006347656.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like isoform X1 [Solanum tuberosum]
           gi|565361832|ref|XP_006347657.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like isoform X2 [Solanum tuberosum]
          Length = 574

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 44/80 (55%), Positives = 54/80 (67%)
 Frame = -3

Query: 240 HYYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDD 61
           H  A+L+ KCI T             IKTALN N FL NRLIDMYAKC+S+E AQ AF++
Sbjct: 13  HNLANLLSKCIRTNDLKLGRLIHSRLIKTALNFNTFLANRLIDMYAKCSSVEYAQQAFNE 72

Query: 60  LRSRNAHSWNTILSAYTRIG 1
           + ++NA SWNTILSAY + G
Sbjct: 73  VSNKNAQSWNTILSAYCKKG 92


>ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
           gi|449526377|ref|XP_004170190.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 577

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 45/82 (54%), Positives = 55/82 (67%)
 Frame = -3

Query: 246 SVHYYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAF 67
           S  + A L  KCI             H IKTAL+ ++FL NRLIDMY+KCNS+E+AQ AF
Sbjct: 10  SFDHCARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAF 69

Query: 66  DDLRSRNAHSWNTILSAYTRIG 1
           DDL  RN HSWNTIL++Y+R G
Sbjct: 70  DDLPIRNIHSWNTILASYSRAG 91


>ref|XP_004305694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Fragaria vesca subsp. vesca]
          Length = 589

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/78 (51%), Positives = 50/78 (64%)
 Frame = -3

Query: 234 YASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDLR 55
           Y SLI K I              FIKTAL  + FL NRLID+Y+KCN++  AQ AFDDL 
Sbjct: 26  YVSLISKSITNKDIRLGRVLHSTFIKTALTFDTFLINRLIDIYSKCNAIPDAQKAFDDLP 85

Query: 54  SRNAHSWNTILSAYTRIG 1
           ++N HSWNT++S Y+R G
Sbjct: 86  TKNTHSWNTMISMYSRNG 103


>ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 580

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 IDSVH-YYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQ 76
           +D  H +Y+SLI KCI T           HFIKTAL    FL NRLID Y+KC+S++SA 
Sbjct: 10  LDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAH 69

Query: 75  GAFDDLRSRNAHSWNTILSAYTRIG 1
             F  L  +N HSWN I+SAY+R G
Sbjct: 70  KVFHVLPVKNTHSWNIIISAYSRSG 94


>gb|EYU23732.1| hypothetical protein MIMGU_mgv1a024961mg [Mimulus guttatus]
          Length = 534

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/77 (48%), Positives = 50/77 (64%)
 Frame = -3

Query: 231 ASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDLRS 52
           A+L   CI T           H IKTA  ++ F TNRL+ +Y++CNS++ AQ  FDDL S
Sbjct: 8   ANLFSNCINTKNLKLGRSLHSHLIKTAFIIDTFFTNRLMQIYSRCNSIDDAQKTFDDLTS 67

Query: 51  RNAHSWNTILSAYTRIG 1
           +NAHSWNT++SAY+  G
Sbjct: 68  KNAHSWNTMISAYSETG 84


>ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cicer arietinum]
          Length = 599

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/82 (43%), Positives = 51/82 (62%)
 Frame = -3

Query: 246 SVHYYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAF 67
           ++   +SLI KC+ T           H IKTAL  +VFL N+LID+Y+KC  +ES   AF
Sbjct: 25  TIENLSSLISKCVTTKSLKLGKALHSHLIKTALFFDVFLANKLIDVYSKCGCIESTHKAF 84

Query: 66  DDLRSRNAHSWNTILSAYTRIG 1
           DD+ ++   SWNT+LS Y++ G
Sbjct: 85  DDIPNKTTRSWNTLLSFYSKTG 106


>ref|XP_006827023.1| hypothetical protein AMTR_s00010p00221030 [Amborella trichopoda]
           gi|548831452|gb|ERM94260.1| hypothetical protein
           AMTR_s00010p00221030 [Amborella trichopoda]
          Length = 645

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 35/81 (43%), Positives = 49/81 (60%)
 Frame = -3

Query: 243 VHYYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFD 64
           V +YASL+  C+ T           H  K  L+ + FLTN LI++Y+KC SL S+Q  FD
Sbjct: 11  VDHYASLLHSCLRTRNPTSPKSIHAHITKHGLHASAFLTNLLINLYSKCGSLSSSQKLFD 70

Query: 63  DLRSRNAHSWNTILSAYTRIG 1
           ++  +N  SWNTI+SAY + G
Sbjct: 71  EMLQKNTSSWNTIISAYAKAG 91


>ref|XP_007032755.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508711784|gb|EOY03681.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 577

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/79 (46%), Positives = 46/79 (58%)
 Frame = -3

Query: 237 YYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDL 58
           YY  LI K I             HFIK AL  N F+TN LI MY+K N ++SAQ AFD+L
Sbjct: 9   YYTFLISKSIKNKNLKLGLLLHSHFIKKALTFNPFITNHLIAMYSKFNEIKSAQKAFDEL 68

Query: 57  RSRNAHSWNTILSAYTRIG 1
             +N+HSWN +L  Y + G
Sbjct: 69  HVKNSHSWNILLFGYLQHG 87


>ref|XP_002516308.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544538|gb|EEF46055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/78 (42%), Positives = 47/78 (60%)
 Frame = -3

Query: 234 YASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDLR 55
           + SL  KCI+T             IKTAL  + F +NR++D+Y+K N ++SAQ  FDD  
Sbjct: 10  WISLFSKCISTRNLKLGLTLHSFLIKTALICSPFFSNRVMDLYSKFNVIDSAQKVFDDNP 69

Query: 54  SRNAHSWNTILSAYTRIG 1
            +N HSWNT++  Y R+G
Sbjct: 70  IKNIHSWNTMIGGYARVG 87


>ref|XP_006581772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Glycine max]
          Length = 581

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/84 (44%), Positives = 46/84 (54%)
 Frame = -3

Query: 252 IDSVHYYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQG 73
           I SV  Y+ LI KCI             H IKTAL  + FL N LID Y+KC   ESA  
Sbjct: 7   ISSVEKYSFLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHK 66

Query: 72  AFDDLRSRNAHSWNTILSAYTRIG 1
            F DL ++   SWNT++S Y++ G
Sbjct: 67  TFGDLPNKTTRSWNTLISFYSKTG 90


>ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491681|gb|AES72884.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 647

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/82 (39%), Positives = 46/82 (56%)
 Frame = -3

Query: 246 SVHYYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAF 67
           ++  ++SLI  C++              IKTAL    FL N LID+Y+KC   ES   AF
Sbjct: 77  TIEKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAF 136

Query: 66  DDLRSRNAHSWNTILSAYTRIG 1
           DDL ++   +WNT+LS Y++ G
Sbjct: 137 DDLPNKTTRTWNTLLSFYSKKG 158


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/78 (37%), Positives = 43/78 (55%)
 Frame = -3

Query: 234 YASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDLR 55
           +A L+D C+ +             IKT  +  +F+ NRL+D+Y KC  LE A+  FD ++
Sbjct: 22  FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81

Query: 54  SRNAHSWNTILSAYTRIG 1
            RN  SWN +L A T+ G
Sbjct: 82  QRNTFSWNAVLGALTKFG 99



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/78 (32%), Positives = 42/78 (53%)
 Frame = -3

Query: 234 YASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDLR 55
           + S +  C                 K+  +L+V++ + L+DMY+KC  + SAQ AFDD+ 
Sbjct: 154 FGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMD 213

Query: 54  SRNAHSWNTILSAYTRIG 1
            RN  SWN++++ Y + G
Sbjct: 214 VRNIVSWNSLITCYEQNG 231


>ref|XP_007137793.1| hypothetical protein PHAVU_009G155900g [Phaseolus vulgaris]
           gi|561010880|gb|ESW09787.1| hypothetical protein
           PHAVU_009G155900g [Phaseolus vulgaris]
          Length = 582

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = -3

Query: 252 IDSVHYYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQG 73
           + SV   + LI KC+             H IKTAL  + FL N LID Y+KC   ES + 
Sbjct: 7   VSSVEKCSFLISKCVTARRVKLTNAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESLRK 66

Query: 72  AFDDLRSRNAHSWNTILSAYTRIG 1
            FDDL ++   SWNT++S Y+++G
Sbjct: 67  TFDDLPNKTTRSWNTLISFYSKMG 90


>ref|XP_004502949.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cicer arietinum]
          Length = 706

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 30/78 (38%), Positives = 43/78 (55%)
 Frame = -3

Query: 234 YASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDLR 55
           +A L+D C+ +             IKT  +  +F+ NRL+D+Y KC  LE A+  FD + 
Sbjct: 22  FAKLLDCCVRSKSVFEARRVHARIIKTQFSSEIFIQNRLVDVYGKCGCLEDARKVFDHMP 81

Query: 54  SRNAHSWNTILSAYTRIG 1
            RN  SWN +LSA T+ G
Sbjct: 82  ERNIFSWNAVLSALTKCG 99


>gb|EPS69323.1| hypothetical protein M569_05443, partial [Genlisea aurea]
          Length = 451

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = -3

Query: 237 YYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKC-NSLESAQGAFDD 61
           + A L   C  T             IKT+L L+ FL NRL++MY++C +S+ S Q AFD+
Sbjct: 2   WLAELFHNCFQTKNIKLGRGLHSLLIKTSLLLDTFLANRLMEMYSRCCDSIVSVQKAFDE 61

Query: 60  LRSRNAHSWNTILSAYTRIG 1
           +  RN HSWN ++++Y ++G
Sbjct: 62  IEFRNCHSWNILMNSYCQVG 81


>ref|XP_007204096.1| hypothetical protein PRUPE_ppa002338mg [Prunus persica]
           gi|462399627|gb|EMJ05295.1| hypothetical protein
           PRUPE_ppa002338mg [Prunus persica]
          Length = 685

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/75 (38%), Positives = 41/75 (54%)
 Frame = -3

Query: 225 LIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDLRSRN 46
           L+D CI T             IKT  +  +F+ NRLID Y KC  L+ A+  FD +  RN
Sbjct: 5   LLDSCIRTKSARDAHRIHARVIKTQFSSEIFIQNRLIDAYGKCGCLDDARKLFDKMPQRN 64

Query: 45  AHSWNTILSAYTRIG 1
             +WN+I+S  T++G
Sbjct: 65  TFTWNSIISTLTKLG 79


>ref|XP_006297108.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
           gi|482565817|gb|EOA30006.1| hypothetical protein
           CARUB_v10013108mg [Capsella rubella]
          Length = 691

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -3

Query: 234 YASLIDKCIATXXXXXXXXXXXHFI-KTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDL 58
           +A L+D CI T             I K+      F+ NRLID Y KC SL+  +  FD++
Sbjct: 22  FAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLDDGRQVFDEM 81

Query: 57  RSRNAHSWNTILSAYTRIG 1
             RN ++WN++L+A T++G
Sbjct: 82  PERNVYTWNSVLTALTKLG 100


>ref|XP_006297107.1| hypothetical protein CARUB_v10013108mg [Capsella rubella]
           gi|482565816|gb|EOA30005.1| hypothetical protein
           CARUB_v10013108mg [Capsella rubella]
          Length = 690

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -3

Query: 234 YASLIDKCIATXXXXXXXXXXXHFI-KTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDL 58
           +A L+D CI T             I K+      F+ NRLID Y KC SL+  +  FD++
Sbjct: 22  FAKLLDSCIRTKLSATDVRCVHACILKSGFKNETFIQNRLIDAYGKCGSLDDGRQVFDEM 81

Query: 57  RSRNAHSWNTILSAYTRIG 1
             RN ++WN++L+A T++G
Sbjct: 82  PERNVYTWNSVLTALTKLG 100


>ref|XP_004491510.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cicer arietinum]
          Length = 813

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/78 (34%), Positives = 45/78 (57%)
 Frame = -3

Query: 234 YASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDLR 55
           +AS++  C +              +K  LN NVF++N +ID+YAKC  +E++   F++L 
Sbjct: 343 FASVLQACASLVLLNVGKQIHSCVLKYGLNSNVFVSNAIIDVYAKCGEIENSMKLFEELP 402

Query: 54  SRNAHSWNTILSAYTRIG 1
            RN  +WNTI+  Y ++G
Sbjct: 403 ERNDVTWNTIIVGYVQLG 420


>ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/77 (36%), Positives = 47/77 (61%)
 Frame = -3

Query: 237 YYASLIDKCIATXXXXXXXXXXXHFIKTALNLNVFLTNRLIDMYAKCNSLESAQGAFDDL 58
           Y ASL+  CI             H +++ L+ + FL+NRLI+ YAKCN++++++  FD +
Sbjct: 7   YLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQM 66

Query: 57  RSRNAHSWNTILSAYTR 7
             R+ ++WN IL AY +
Sbjct: 67  PKRDIYTWNAILGAYCK 83