BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00060316
         (236 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              90   3e-16
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...    86   4e-15
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 84   2e-14
gb|AAO73258.1| putative GAG-POL precursor [Oryza sativa Japonica...    84   3e-14
gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subc...    84   3e-14
gb|ABA96941.1| retrotransposon protein, putative, unclassified [...    84   3e-14
gb|ABF97014.1| retrotransposon protein, putative, unclassified [...    84   3e-14
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...    83   3e-14
gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Jap...    83   3e-14
gb|ABA92927.2| retrotransposon protein, putative, Ty3-gypsy subc...    83   3e-14
gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subc...    83   3e-14
gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]      83   3e-14
gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Jap...    83   3e-14
emb|CAN70072.1| hypothetical protein VITISV_011916 [Vitis vinifera]    83   5e-14
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617...    82   6e-14
gb|AAO19368.1| putative polyprotein [Oryza sativa Japonica Group]      82   6e-14
emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]                 82   6e-14
gb|ABF98364.1| retrotransposon protein, putative, unclassified [...    82   6e-14
emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group] gi...    82   6e-14
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc...    82   8e-14

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 44/77 (57%), Positives = 59/77 (76%)
 Frame = +3

Query: 3    QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
            +++FE+LK+YL+  P+L KPE GE LYLY+AVS+ A+S VL++ED   QRPI+Y SK L 
Sbjct: 1096 EEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRGEQRPIFYTSKSLV 1155

Query: 183  GAEVRYKKVEKMALALV 233
             AE RY  +EK ALA+V
Sbjct: 1156 EAETRYPVIEKAALAVV 1172


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1459

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/78 (50%), Positives = 58/78 (74%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           QK+F++LK+YL N+P L+ P++GE L LY+A + V +S VL++E    Q P+Y+VS+ LQ
Sbjct: 737 QKAFDDLKDYLHNMPTLSSPQKGEPLLLYVAATPVTVSAVLVQEQGNKQMPVYFVSEALQ 796

Query: 183 GAEVRYKKVEKMALALVM 236
           G + RY +VEKM  A+VM
Sbjct: 797 GPKTRYIEVEKMIYAIVM 814


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 40/75 (53%), Positives = 58/75 (77%)
 Frame = +3

Query: 9   SFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQGA 188
           +FE+L++YLAN  +L++PE+ E+LY YLAV   A+S+VL++ D+  Q+PIYY+SK LQ A
Sbjct: 367 AFEDLRQYLANPLILSRPEKKEVLYAYLAVMNYAVSLVLIRNDDGVQKPIYYISKSLQEA 426

Query: 189 EVRYKKVEKMALALV 233
           E RY  +EK  LA+V
Sbjct: 427 ERRYLPLEKALLAVV 441


>gb|AAO73258.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
          Length = 562

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/78 (52%), Positives = 56/78 (71%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           Q +F+ELK+YL +LP L  P  G  L LYLA S VA+S  L++E    Q+P+Y+VS+ LQ
Sbjct: 146 QAAFDELKQYLQSLPALISPPLGSDLLLYLAASPVAVSAALVQETEFGQKPVYFVSEALQ 205

Query: 183 GAEVRYKKVEKMALALVM 236
           GA+ RY ++EK+A ALVM
Sbjct: 206 GAKTRYIEMEKLAYALVM 223


>gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1412

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 39/78 (50%), Positives = 57/78 (73%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           Q +F+ELK+YL + P L  P  G  L LYLA S VA++ +L++E    Q+P+Y+VS+ LQ
Sbjct: 728 QAAFDELKQYLQSPPDLVSPAPGSDLLLYLAASPVAVNAILIQETESGQKPVYFVSEALQ 787

Query: 183 GAEVRYKKVEKMALALVM 236
           GA++RY ++EK+A ALVM
Sbjct: 788 GAKIRYIEMEKLAYALVM 805


>gb|ABA96941.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 496

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           Q +F+ELK+YL + P L  P  G  L LYLA S VA+S  L++E    Q+P+Y++SK LQ
Sbjct: 183 QVAFDELKQYLQSPPALISPAPGSELLLYLAASPVAVSAALVQETESGQKPVYFISKALQ 242

Query: 183 GAEVRYKKVEKMALALVM 236
           GA+ RY ++EK+A ALVM
Sbjct: 243 GAKTRYIEMEKLAYALVM 260


>gb|ABF97014.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 574

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/78 (52%), Positives = 56/78 (71%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           Q +F+ELK+YL +LP L  P  G  L LYLA S VA+S  L++E    Q+P+Y+VS+ LQ
Sbjct: 158 QAAFDELKQYLQSLPALISPPLGSDLLLYLAASPVAVSAALVQETEFGQKPVYFVSEALQ 217

Query: 183 GAEVRYKKVEKMALALVM 236
           GA+ RY ++EK+A ALVM
Sbjct: 218 GAKTRYIEMEKLAYALVM 235


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = +3

Query: 3    QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
            +++F +LKEYLA  PLL+ P EG+ L LYLA+S+ A S VL++E+   Q P+YY SK L 
Sbjct: 1131 EEAFGQLKEYLARAPLLSTPREGDQLLLYLAISKRATSSVLVREEEGKQHPVYYTSKALV 1190

Query: 183  GAEVRYKKVEKMALALV 233
             AE RY  +EK ALAL+
Sbjct: 1191 DAETRYPPMEKWALALI 1207


>gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431922|gb|AAP53628.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1292

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/78 (51%), Positives = 56/78 (71%)
 Frame = +3

Query: 3    QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
            Q +F+ELK+YL + P L  P  G  L LYLA S VA+S  L++E    Q+P+Y++S+VLQ
Sbjct: 809  QAAFDELKQYLQSSPALISPPPGSELLLYLAASPVAVSAALVQETEFGQKPVYFISEVLQ 868

Query: 183  GAEVRYKKVEKMALALVM 236
            GA+ RY ++EK+A ALVM
Sbjct: 869  GAKTRYIEMEKLAYALVM 886


>gb|ABA92927.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1590

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/78 (52%), Positives = 56/78 (71%)
 Frame = +3

Query: 3    QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
            Q +F+ELK+YL + P L  P  G  L LYLA S VA+SV L++E    Q+P+Y+VS+ LQ
Sbjct: 1086 QAAFDELKQYLQSPPALISPPLGSELLLYLAASPVAVSVALVQETEFGQKPVYFVSEALQ 1145

Query: 183  GAEVRYKKVEKMALALVM 236
            GA+ RY ++EK+A ALVM
Sbjct: 1146 GAKTRYTEMEKLAYALVM 1163


>gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1908

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/78 (52%), Positives = 55/78 (70%)
 Frame = +3

Query: 3    QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
            Q +F+ELK+YL + P L  P  G  L LYLA S VAIS  L++E    Q+P+Y+VS+ LQ
Sbjct: 1180 QAAFDELKQYLQSPPALISPPPGSELLLYLAASPVAISAALVQETESGQKPVYFVSEALQ 1239

Query: 183  GAEVRYKKVEKMALALVM 236
            GA+ RY ++EK+A ALVM
Sbjct: 1240 GAKTRYIEMEKLAYALVM 1257


>gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1862

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/78 (52%), Positives = 55/78 (70%)
 Frame = +3

Query: 3    QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
            Q +F+ELK+YL + P L  P  G  L LYLA S VAIS  L++E    Q+P+Y+VS+ LQ
Sbjct: 1134 QAAFDELKQYLQSPPALISPPPGSELLLYLAASPVAISAALVQETESGQKPVYFVSEALQ 1193

Query: 183  GAEVRYKKVEKMALALVM 236
            GA+ RY ++EK+A ALVM
Sbjct: 1194 GAKTRYIEMEKLAYALVM 1211


>gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1291

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/78 (51%), Positives = 56/78 (71%)
 Frame = +3

Query: 3    QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
            Q +F+ELK+YL + P L  P  G  L LYLA S VA+S  L++E    Q+P+Y++S+VLQ
Sbjct: 904  QAAFDELKQYLQSSPALISPPPGSELLLYLAASPVAVSAALVQETEFGQKPVYFISEVLQ 963

Query: 183  GAEVRYKKVEKMALALVM 236
            GA+ RY ++EK+A ALVM
Sbjct: 964  GAKTRYIEMEKLAYALVM 981


>emb|CAN70072.1| hypothetical protein VITISV_011916 [Vitis vinifera]
          Length = 739

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
 Frame = +3

Query: 9   SFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLL--KEDNEAQRPIYYVSKVLQ 182
           +F E+K YL   P+L+ P+ GE LY+YLA+S+ A++VVL   K D E QRPIYYVSKV+ 
Sbjct: 207 TFGEVKRYLKQPPILSSPQPGEQLYIYLAMSDYAVNVVLFLHKRDKE-QRPIYYVSKVMV 265

Query: 183 GAEVRYKKVEKMALAL 230
            AE RY K+E+MALAL
Sbjct: 266 DAETRYSKMEQMALAL 281


>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
          Length = 1100

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 40/77 (51%), Positives = 56/77 (72%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           +++F +LKEYLA+ PLL+ P EG+ L+LYLA+S+ A S VL++E+   Q P+YY SK L 
Sbjct: 744 EEAFGQLKEYLAHAPLLSTPREGDQLFLYLAISKRATSSVLVREEEGKQHPVYYTSKALV 803

Query: 183 GAEVRYKKVEKMALALV 233
            AE RY  +EK A AL+
Sbjct: 804 DAETRYPLMEKWAQALI 820


>gb|AAO19368.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 777

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           Q  F+ELK+YL + P L  P  G  L LYLA S VA+S  L++E +  Q+P+Y+VS+ LQ
Sbjct: 319 QAVFDELKQYLQSPPALISPASGSELLLYLAASPVAVSAALVQETDSGQKPVYFVSEALQ 378

Query: 183 GAEVRYKKVEKMALALVM 236
           GA+ RY ++EK+A ALVM
Sbjct: 379 GAKTRYIEMEKLAYALVM 396


>emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]
          Length = 943

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 36/78 (46%), Positives = 56/78 (71%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           QK+F++LK YL N+P L  P++G+ L +Y+A + V +S VL++E    Q P+Y+VS+ LQ
Sbjct: 265 QKAFDDLKTYLQNMPTLASPQKGQPLLMYVAATPVTVSAVLVQEKENKQMPVYFVSEALQ 324

Query: 183 GAEVRYKKVEKMALALVM 236
           G + RY +VEK+  A+VM
Sbjct: 325 GPKTRYTEVEKLIYAIVM 342


>gb|ABF98364.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 790

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           Q  F+ELK+YL + P L  P  G  L LYLA S VA+S  L++E +  Q+P+Y+VS+ LQ
Sbjct: 319 QAVFDELKQYLQSPPALISPASGSELLLYLAASPVAVSAALVQETDSGQKPVYFVSEALQ 378

Query: 183 GAEVRYKKVEKMALALVM 236
           GA+ RY ++EK+A ALVM
Sbjct: 379 GAKTRYIEMEKLAYALVM 396


>emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group]
           gi|38344987|emb|CAE02793.2| OSJNBa0011L07.17 [Oryza
           sativa Japonica Group]
          Length = 943

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 36/78 (46%), Positives = 56/78 (71%)
 Frame = +3

Query: 3   QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
           QK+F++LK YL N+P L  P++G+ L +Y+A + V +S VL++E    Q P+Y+VS+ LQ
Sbjct: 265 QKAFDDLKTYLQNMPTLASPQKGQPLLMYVAATPVTVSAVLVQEKENKQMPVYFVSEALQ 324

Query: 183 GAEVRYKKVEKMALALVM 236
           G + RY +VEK+  A+VM
Sbjct: 325 GPKTRYTEVEKLIYAIVM 342


>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1767

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 39/78 (50%), Positives = 55/78 (70%)
 Frame = +3

Query: 3    QKSFEELKEYLANLPLLTKPEEGEILYLYLAVSEVAISVVLLKEDNEAQRPIYYVSKVLQ 182
            Q +F+ELK+YL + P L  P  G  L LYLA S VA+S  L++E    Q+P+Y+VS+ LQ
Sbjct: 1043 QAAFDELKQYLQSPPALISPPPGSELLLYLAASSVAVSAALVQETESGQKPVYFVSEALQ 1102

Query: 183  GAEVRYKKVEKMALALVM 236
            GA+ RY ++EK++ ALVM
Sbjct: 1103 GAKTRYIEMEKLSYALVM 1120