BLASTX nr result

ID: Cocculus23_contig00059708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00059708
         (288 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...   122   4e-26
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    82   1e-17
gb|AGC78956.1| hypothetical protein (mitochondrion) [Vicia faba]       82   1e-16
ref|XP_006388280.1| hypothetical protein POPTR_0248s00200g [Popu...    74   3e-11
ref|XP_002322006.1| hypothetical protein POPTR_0015s01800g [Popu...    69   5e-10
ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...    64   3e-08

>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  122 bits (307), Expect = 4e-26
 Identities = 65/80 (81%), Positives = 66/80 (82%)
 Frame = -3

Query: 241 TKHLXXXXXXXXXXXALVILTVLSAGAPFHCSSHKLWQLQLAPTGARPARPEWAQRSAPI 62
           TKHL           ALVILTVLSAGAP+ CSSHKLWQLQLA TGARPARPEWA RSAPI
Sbjct: 127 TKHLPAVLAARLTGGALVILTVLSAGAPY-CSSHKLWQLQLATTGARPARPEWAPRSAPI 185

Query: 61  RITLGGLSLLPDLERYYESS 2
           RITLGGLSLLPDLERYYESS
Sbjct: 186 RITLGGLSLLPDLERYYESS 205


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 81.6 bits (200), Expect(2) = 1e-17
 Identities = 46/72 (63%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = -2

Query: 254 GRLAYQALARCSCRPPSGRSARYPYCSLCWGXXXXXXXXXXXXXARTHGGPP--CEARVG 81
           G LAYQALARCSCRPPSGRSARYPY S   G             +    GP   CEARVG
Sbjct: 121 GLLAYQALARCSCRPPSGRSARYPYFS---GTPPIALAISYGSSSSQPQGPALRCEARVG 177

Query: 80  SAVSPHSNYVRG 45
           SAVSPHSNYVRG
Sbjct: 178 SAVSPHSNYVRG 189



 Score = 33.9 bits (76), Expect(2) = 1e-17
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -3

Query: 46  GLSLLPDLERYYESS 2
           GLSLLPDLERYYESS
Sbjct: 189 GLSLLPDLERYYESS 203



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/65 (53%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
 Frame = -1

Query: 276 PFVECPARAVGLPSTCPL----LLPPAKRAERXXXXXXXXLGPPSIALAISYGSSSSHPR 109
           PFVECPAR  GL +   L      PP+ R+ R         G P IALAISYGSSSS P+
Sbjct: 111 PFVECPARFTGLLAYQALARCSCRPPSGRSAR----YPYFSGTPPIALAISYGSSSSQPQ 166

Query: 108 GPALR 94
           GPALR
Sbjct: 167 GPALR 171


>gb|AGC78956.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 101

 Score = 82.4 bits (202), Expect(2) = 1e-16
 Identities = 40/46 (86%), Positives = 40/46 (86%)
 Frame = -3

Query: 193 LVILTVLSAGAPFHCSSHKLWQLQLAPTGARPARPEWAQRSAPIRI 56
           LVILTVL AGAP HCSSHKLWQLQL   GARPARPEWAQ SAPIRI
Sbjct: 14  LVILTVLYAGAPSHCSSHKLWQLQLETKGARPARPEWAQWSAPIRI 59



 Score = 29.6 bits (65), Expect(2) = 1e-16
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -2

Query: 53  VRGSFAFARSREILRV 6
           ++GS AFARSREILRV
Sbjct: 59  IKGSLAFARSREILRV 74


>ref|XP_006388280.1| hypothetical protein POPTR_0248s00200g [Populus trichocarpa]
           gi|550309931|gb|ERP47194.1| hypothetical protein
           POPTR_0248s00200g [Populus trichocarpa]
          Length = 103

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = -3

Query: 112 TGARPARPEWAQRSAPIRITLGGLSLLPDLERYYESS 2
           TG R ARPEWAQRSAPIRITLGGLSLLPDLERYYESS
Sbjct: 10  TGTRHARPEWAQRSAPIRITLGGLSLLPDLERYYESS 46


>ref|XP_002322006.1| hypothetical protein POPTR_0015s01800g [Populus trichocarpa]
           gi|222869002|gb|EEF06133.1| hypothetical protein
           POPTR_0015s01800g [Populus trichocarpa]
          Length = 109

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -3

Query: 112 TGARPARPEWAQRSAPIRITLGGLSLLPDLERYYESS 2
           TG R ARPEWAQRSAPIRI LGGLSLLPDL+RYYESS
Sbjct: 10  TGPRHARPEWAQRSAPIRIILGGLSLLPDLKRYYESS 46


>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|355477312|gb|AES58515.1| hypothetical protein
           MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/39 (79%), Positives = 32/39 (82%)
 Frame = +2

Query: 140 MARAMEGGPSRENSKDNERSARLAGGRSSGQVLGRPTAR 256
           MARAM GGP  EN KDNERSAR AGGRS GQVLGRPT +
Sbjct: 1   MARAMGGGPGIENCKDNERSARQAGGRSCGQVLGRPTGK 39


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