BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00059699
         (267 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi...   118   8e-25
ref|XP_002535423.1| pentatricopeptide repeat-containing protein,...   118   8e-25
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]   118   8e-25
ref|XP_007029836.1| Tetratricopeptide repeat (TPR)-like superfam...   117   2e-24
ref|XP_006354668.1| PREDICTED: pentatricopeptide repeat-containi...   112   5e-23
ref|XP_007220984.1| hypothetical protein PRUPE_ppa002467mg [Prun...   109   5e-22
ref|XP_004229586.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_004308640.1| PREDICTED: pentatricopeptide repeat-containi...   108   8e-22
gb|EYU26815.1| hypothetical protein MIMGU_mgv1a025773mg [Mimulus...   107   2e-21
ref|NP_187008.1| pentatricopeptide repeat-containing protein [Ar...   104   1e-20
ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containi...   102   6e-20
ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containi...   102   6e-20
ref|XP_002884396.1| pentatricopeptide repeat-containing protein ...   101   1e-19
emb|CBI39966.3| unnamed protein product [Vitis vinifera]               98   1e-18
ref|XP_006408289.1| hypothetical protein EUTSA_v10020027mg [Eutr...    98   1e-18
ref|XP_006296957.1| hypothetical protein CARUB_v10012948mg [Caps...    96   5e-18
ref|XP_002318172.1| pentatricopeptide repeat-containing family p...    92   6e-17
emb|CBI31859.3| unnamed protein product [Vitis vinifera]               88   1e-15
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_002881503.1| pentatricopeptide repeat-containing protein ...    87   3e-15

>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  118 bits (296), Expect = 8e-25
 Identities = 54/87 (62%), Positives = 71/87 (81%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +VNNGL+SMY K   L   +++F++M  RD VSWNTMICGYSQ+ +++++IKLF EMV +
Sbjct: 252 IVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ 311

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           FKPDLLTITS+L+ACGH+ DLE G YV
Sbjct: 312 FKPDLLTITSILQACGHLGDLEFGKYV 338



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKL-FREMVVR 184
           + N LI MY +   L  A+KVF EM  RD VSWN++I GY+    + +A+++ +R   + 
Sbjct: 152 IGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLG 211

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD  T++SVLRACG +  +E G  +
Sbjct: 212 VVPDSYTMSSVLRACGGLGSVEEGDII 238



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = +2

Query: 11  NNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFK 190
           +N LI+MY K  +L  +Q+VF+ M  +D VSWN+MI  Y Q   F +A+KLF+ M    K
Sbjct: 354 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVK 413

Query: 191 PDLLTITSVLRACGHMEDLELG 256
           PD +T   +L     + DL LG
Sbjct: 414 PDSVTYVMLLSMSTQLGDLHLG 435


>ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223523164|gb|EEF26960.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 563

 Score =  118 bits (296), Expect = 8e-25
 Identities = 55/87 (63%), Positives = 72/87 (82%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +++NGL+SMYFK   L  AQ+VFN+M  +D VSWNT+ICGY Q+ +F+++I+LFREMV R
Sbjct: 170 IMSNGLLSMYFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKR 229

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           F+PDLLTITSVLRACG + DLE G +V
Sbjct: 230 FRPDLLTITSVLRACGLLRDLEFGKFV 256



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           + N L+ MY +   L  A+ VF EM  RD VSWN++I GYS    + +A++++ E+ +  
Sbjct: 70  IGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEIYYELRIAG 129

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
            KPD  T++SVL ACG +  ++ G  +
Sbjct: 130 LKPDNFTLSSVLPACGGLLAVKEGEVI 156



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/82 (37%), Positives = 48/82 (58%)
 Frame = +2

Query: 11  NNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFK 190
           +N +I  Y K   L  ++K F+ +  RD VSWNT+I GY Q   + + +KLF++M +  K
Sbjct: 272 SNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKMKMDLK 331

Query: 191 PDLLTITSVLRACGHMEDLELG 256
           PD +T  ++L     + D ELG
Sbjct: 332 PDSITFVTLLSISTRLADTELG 353


>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  118 bits (296), Expect = 8e-25
 Identities = 54/87 (62%), Positives = 71/87 (81%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +VNNGL+SMY K   L   +++F++M  RD VSWNTMICGYSQ+ +++++IKLF EMV +
Sbjct: 311 IVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ 370

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           FKPDLLTITS+L+ACGH+ DLE G YV
Sbjct: 371 FKPDLLTITSILQACGHLGDLEFGKYV 397



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKL-FREMVVR 184
           + N LI MY +   L  A+KVF EM  RD VSWN++I GY+    + +A+++ +R   + 
Sbjct: 211 IGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLG 270

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD  T++SVLRACG +  +E G  +
Sbjct: 271 VVPDSYTMSSVLRACGGLGSVEEGDII 297



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = +2

Query: 11  NNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFK 190
           +N LI+MY K  +L  +Q+VF+ M  +D VSWN+MI  Y Q   F +A+KLF+ M    K
Sbjct: 413 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVK 472

Query: 191 PDLLTITSVLRACGHMEDLELG 256
           PD +T   +L     + DL LG
Sbjct: 473 PDSVTYVMLLSMSTQLGDLXLG 494


>ref|XP_007029836.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508718441|gb|EOY10338.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 889

 Score =  117 bits (293), Expect = 2e-24
 Identities = 54/87 (62%), Positives = 71/87 (81%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +V+NGL+SMYFK   L  A+++F+EM  RD VSWNT+ICGYSQ+ +FK++I LF +MV +
Sbjct: 252 VVSNGLLSMYFKFNRLVDARRIFDEMVVRDTVSWNTLICGYSQMELFKESILLFMQMVNK 311

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           F+PDLLTITSVL ACGH+ DLE G +V
Sbjct: 312 FEPDLLTITSVLCACGHLRDLEFGKFV 338



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFR-EMVVR 184
           + N L+ MY +   L  A KVFN M ERD VSWN++I GYS    +++A++++    +  
Sbjct: 152 IGNALVDMYARFGCLAEALKVFNGMPERDVVSWNSLISGYSANGYWEEALEVYNMARMAG 211

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD  T++SVL ACG + D++ G  V
Sbjct: 212 IMPDCYTVSSVLPACGGLVDVKEGEVV 238



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/82 (41%), Positives = 49/82 (59%)
 Frame = +2

Query: 11  NNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFK 190
           +N LI MY K   L  +++VF+ M  RD VSWN++I GY Q   + +A+KLFR M +  K
Sbjct: 354 DNILIDMYSKCGDLLASREVFDRMICRDSVSWNSIINGYFQYGKYDEAVKLFRIMKIDSK 413

Query: 191 PDLLTITSVLRACGHMEDLELG 256
            D +T   +L A   + D +LG
Sbjct: 414 VDSITCVMLLSASTQLADKDLG 435


>ref|XP_006354668.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Solanum tuberosum]
          Length = 891

 Score =  112 bits (280), Expect = 5e-23
 Identities = 51/86 (59%), Positives = 68/86 (79%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRF 187
           V+NGL+SMYFK E L   Q++F+EM  RD V+WN +ICG+S   +++++IKLFREMV  +
Sbjct: 255 VSNGLLSMYFKFERLLDCQRIFDEMIFRDIVTWNIIICGFSHSGLYQESIKLFREMVYEY 314

Query: 188 KPDLLTITSVLRACGHMEDLELGTYV 265
           +PDLLT+TSVL+ACGHM DL  G YV
Sbjct: 315 EPDLLTVTSVLQACGHMGDLRFGRYV 340



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +2

Query: 14  NGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFRE-MVVRFK 190
           N LI MY ++  LG A++VF++M  RD VSWN+++ GYS    +++A++ FRE  +    
Sbjct: 156 NALIDMYSRMNELGRAREVFDKMPSRDVVSWNSLVSGYSANGYWEEALEAFREGRLSGVA 215

Query: 191 PDLLTITSVLRACGHMEDLELGTYV 265
            D  T++SVL ACG + ++E G  V
Sbjct: 216 ADAFTVSSVLPACGGLMEVEQGQIV 240



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/79 (35%), Positives = 47/79 (59%)
 Frame = +2

Query: 14  NGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFKP 193
           N +I+MY +   L  A++VF+ M   D VSWN+MI GY +    K+A+ L + M +  +P
Sbjct: 357 NIIINMYARCGDLVAARQVFDNMKRWDLVSWNSMISGYFENGFNKEAVDLLKMMRIDLQP 416

Query: 194 DLLTITSVLRACGHMEDLE 250
           D +T  ++L  C  + D++
Sbjct: 417 DSVTFVTLLSMCTELMDVD 435


>ref|XP_007220984.1| hypothetical protein PRUPE_ppa002467mg [Prunus persica]
           gi|462417446|gb|EMJ22183.1| hypothetical protein
           PRUPE_ppa002467mg [Prunus persica]
          Length = 670

 Score =  109 bits (272), Expect = 5e-22
 Identities = 55/87 (63%), Positives = 63/87 (72%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           LV+NGL+SMYFK   L  AQ  F     RD VSWNT+ICGYSQL +F+++I LF EMV  
Sbjct: 254 LVSNGLLSMYFKFGWLKDAQLFFQRTVVRDSVSWNTVICGYSQLGLFEESINLFMEMVNE 313

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           F PDLLTITSVLRAC H+ DL L  YV
Sbjct: 314 FTPDLLTITSVLRACAHLRDLGLARYV 340



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           + N LI MY +    G A+++F EM  RD VSWN++I GYS    +++A+++F  + +  
Sbjct: 154 IGNALIDMYARFGEFGKARRMFEEMPLRDIVSWNSLISGYSSNGYWEEALEIFHRLRMDG 213

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD  +I+ VL ACG + D+  G  V
Sbjct: 214 LLPDSFSISGVLPACGSLVDVREGQIV 240


>ref|XP_004229586.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Solanum lycopersicum]
          Length = 891

 Score =  108 bits (271), Expect = 6e-22
 Identities = 50/86 (58%), Positives = 67/86 (77%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRF 187
           V+NGL+SMYFK E L   Q++F+EM  RD V+WN +ICG+S   +++++IKLF+EMV   
Sbjct: 255 VSNGLLSMYFKFERLLDCQRIFDEMIYRDIVTWNIIICGFSHSGLYQESIKLFQEMVDEH 314

Query: 188 KPDLLTITSVLRACGHMEDLELGTYV 265
           KPDLLT+TSVL+ACGHM DL  G +V
Sbjct: 315 KPDLLTVTSVLQACGHMGDLRFGRFV 340



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +2

Query: 14  NGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFRE-MVVRFK 190
           N LI MY ++  LG A+ VF+EM  RD VSWN+++ GYS    +++A+++FRE  +    
Sbjct: 156 NALIDMYARMNELGRARVVFDEMPSRDVVSWNSLVSGYSANGYWEEALEVFREGRLSGVA 215

Query: 191 PDLLTITSVLRACGHMEDLELGTYV 265
            D  T++SVL ACG + ++E G  V
Sbjct: 216 ADAFTVSSVLPACGGLMEVEQGQMV 240



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/79 (34%), Positives = 48/79 (60%)
 Frame = +2

Query: 14  NGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFKP 193
           N +I+MY +   L  A++VF+ M   D VSWN++I GY +  + K+A+ L + M +  +P
Sbjct: 357 NIIINMYARCGDLVAARQVFDNMKRWDLVSWNSIISGYFENGLNKEAVDLLKMMRIDLQP 416

Query: 194 DLLTITSVLRACGHMEDLE 250
           D +T  ++L  C  + D++
Sbjct: 417 DSVTFVTLLSMCTKLMDVD 435


>ref|XP_004308640.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Fragaria vesca subsp. vesca]
          Length = 764

 Score =  108 bits (270), Expect = 8e-22
 Identities = 52/87 (59%), Positives = 63/87 (72%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           LV+NG+++MYFK      A+  F  M  RDCVSWNT++CGY QL +F +AI LFREM+  
Sbjct: 254 LVSNGILAMYFKFGWCRDARIFFEGMVVRDCVSWNTVVCGYLQLCLFDEAISLFREMIKE 313

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           F PDLLTITSVLRAC H+ DL L  YV
Sbjct: 314 FTPDLLTITSVLRACSHLRDLGLAKYV 340



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLF-REMVVR 184
           V N LI MY +L  LG A++VF+EM ERD VSWN++I GYS    +++A+++F R  +  
Sbjct: 154 VCNALIDMYARLGELGHARQVFDEMRERDVVSWNSLISGYSSNGYWEEALEMFWRLRMEG 213

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD  +I+SVL ACG + D++ G  V
Sbjct: 214 LVPDCFSISSVLPACGSLVDVKEGRLV 240


>gb|EYU26815.1| hypothetical protein MIMGU_mgv1a025773mg [Mimulus guttatus]
          Length = 884

 Score =  107 bits (266), Expect = 2e-21
 Identities = 48/87 (55%), Positives = 67/87 (77%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +V+NGL+SMYFK + L    ++FNEM  +D V+WNT+ICGY +   ++++I LF EMV  
Sbjct: 247 IVSNGLLSMYFKFDMLNNCDRIFNEMVRKDSVTWNTIICGYCESGFYEESINLFLEMVDS 306

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           FKPD+LTITSVLRAC ++ +L+LG YV
Sbjct: 307 FKPDILTITSVLRACTYVGNLKLGRYV 333



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           +NN L+ MY +   LG A++VF+EM  RD VSWN++I GY+    FK+A++++ ++ +  
Sbjct: 147 INNTLVDMYSRCSELGRAREVFDEMPSRDIVSWNSLISGYTSNGYFKEALEVYTQLRIGG 206

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD  + +SVL  CG + ++E G  V
Sbjct: 207 LMPDSFSFSSVLLTCGGLGEVEEGQIV 233



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/81 (32%), Positives = 49/81 (60%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           + +N +I+MY K   +  +++VF  MG  D VSWN+++ GY +  ++++AI L R M   
Sbjct: 347 IASNIIINMYAKCGDVLHSREVFESMGNHDLVSWNSLLNGYIENGLYQEAIDLLRRMKKS 406

Query: 185 FKPDLLTITSVLRACGHMEDL 247
           F+PD +T  ++   C  + ++
Sbjct: 407 FQPDFVTYVALFSICTELANV 427


>ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g03580 gi|6091764|gb|AAF03474.1|AC009327_13
           hypothetical protein [Arabidopsis thaliana]
           gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis
           thaliana] gi|29824355|gb|AAP04138.1| unknown protein
           [Arabidopsis thaliana] gi|332640438|gb|AEE73959.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 882

 Score =  104 bits (260), Expect = 1e-20
 Identities = 47/87 (54%), Positives = 67/87 (77%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +VNNGL++MY K      A++VF+EM  RD VS+NTMICGY +L M ++++++F E + +
Sbjct: 243 VVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ 302

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           FKPDLLT++SVLRACGH+ DL L  Y+
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYI 329



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/78 (39%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRF 187
           V N L+ MY ++  L  A++VF+EM  RD VSWN++I GYS    +++A++++ E+   +
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202

Query: 188 -KPDLLTITSVLRACGHM 238
             PD  T++SVL A G++
Sbjct: 203 IVPDSFTVSSVLPAFGNL 220


>ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  102 bits (254), Expect = 6e-20
 Identities = 45/87 (51%), Positives = 66/87 (75%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           ++ NGL+SMYFK E L  A++VF++M  +D V+WNTMICGY+QL   + ++KLF +M+  
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDG 317

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           F PD+L+ITS +RACG   DL++G +V
Sbjct: 318 FVPDMLSITSTIRACGQSGDLQVGKFV 344



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           + N LI MY +   L  A+ VF EM  RD VSWN++I GY     ++DA+ ++ +  +  
Sbjct: 158 IGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTG 217

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD  T++SVL ACG +  ++ G  V
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAV 244



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = +2

Query: 14  NGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFKP 193
           N LI MY K   L  AQ+VF+    +D V+WN++I GY+Q   +K+ ++ F+ M +  KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP 420

Query: 194 DLLTITSVLRACGHMEDLELG 256
           D +T   +L     + D+  G
Sbjct: 421 DSVTFVLLLSIFSQLADINQG 441


>ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  102 bits (254), Expect = 6e-20
 Identities = 45/87 (51%), Positives = 66/87 (75%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           ++ NGL+SMYFK E L  A++VF++M  +D V+WNTMICGY+QL   + ++KLF +M+  
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDG 317

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           F PD+L+ITS +RACG   DL++G +V
Sbjct: 318 FVPDMLSITSTIRACGQSGDLQVGKFV 344



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           + N LI MY +   L  A+ VF EM  RD VSWN++I GY     ++DA+ ++ +  +  
Sbjct: 158 IGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTG 217

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD  T++SVL ACG +  ++ G  V
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAV 244



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = +2

Query: 14  NGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFKP 193
           N LI MY K   L  AQ+VF+    +D V+WN++I GY+Q   +K+ ++ F+ M +  KP
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP 420

Query: 194 DLLTITSVLRACGHMEDLELG 256
           D +T   +L     + D+  G
Sbjct: 421 DSVTFVLLLSIFSQLADINQG 441


>ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330236|gb|EFH60655.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 882

 Score =  101 bits (251), Expect = 1e-19
 Identities = 46/87 (52%), Positives = 66/87 (75%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +VNNGL++MY K      A++VF+EM  RD V++NTMICGY +L M ++++K+F E + +
Sbjct: 243 VVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ 302

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           FKPD+LT+TSVL ACGH+ DL L  Y+
Sbjct: 303 FKPDILTVTSVLCACGHLRDLSLAKYI 329



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRF 187
           V N L+ MY ++  L  A++VF+EM  RD VSWN++I GYS    +++A++++ E+   +
Sbjct: 143 VGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSW 202

Query: 188 -KPDLLTITSVLRACGHM 238
             PD  T++SVL A  ++
Sbjct: 203 IVPDSFTVSSVLPAFANL 220


>emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQ-------LSMFKDAIKLF 166
           + N LI MY +   L  A+KVF EM  RD VSWN++I GY+        L ++  +IKLF
Sbjct: 152 IGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLF 211

Query: 167 REMVVRFKPDLLTITSVLRACGHMEDLELGTYV 265
            EMV +FKPDLLTITS+L+ACGH+ DLE G YV
Sbjct: 212 MEMVNQFKPDLLTITSILQACGHLGDLEFGKYV 244



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 50/82 (60%)
 Frame = +2

Query: 11  NNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRFK 190
           +N LI+MY K  +L  +Q+VF+ M  +D VSWN+MI  Y Q     D++K+F  M  R  
Sbjct: 260 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKAR-- 317

Query: 191 PDLLTITSVLRACGHMEDLELG 256
            D++T  +++ +C H ED  LG
Sbjct: 318 -DIITWNTIIASCVHSEDCNLG 338


>ref|XP_006408289.1| hypothetical protein EUTSA_v10020027mg [Eutrema salsugineum]
           gi|557109435|gb|ESQ49742.1| hypothetical protein
           EUTSA_v10020027mg [Eutrema salsugineum]
          Length = 883

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 42/87 (48%), Positives = 66/87 (75%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +VNNGL++MY K      A++VF+EM  RD +S+NT+ICG+    M+++++++F E + +
Sbjct: 243 VVNNGLLAMYLKFSRPTDARRVFDEMVVRDSISYNTIICGFLNSEMYEESLRMFLENLDQ 302

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           FKPD+LT++S+LRACGH+ DL L  YV
Sbjct: 303 FKPDILTVSSILRACGHLRDLRLAKYV 329



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRF 187
           V N L+ MY ++ SL  A++VF+EM  RD VSWN++I G+     +++A+ ++ E+   +
Sbjct: 143 VGNALVDMYSRMGSLDRARQVFDEMPVRDLVSWNSLISGFCSHGYYEEALGIYHELRNSW 202

Query: 188 -KPDLLTITSVLRACGHM 238
             PD  T +SVL A G++
Sbjct: 203 IVPDSFTFSSVLPAFGNL 220


>ref|XP_006296957.1| hypothetical protein CARUB_v10012948mg [Capsella rubella]
           gi|482565666|gb|EOA29855.1| hypothetical protein
           CARUB_v10012948mg [Capsella rubella]
          Length = 884

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 43/87 (49%), Positives = 64/87 (73%)
 Frame = +2

Query: 5   LVNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR 184
           +V+NGL++MY K      A++VF+EM  RD +S+NT+ICGY  L M + ++++F E + +
Sbjct: 245 VVDNGLLAMYLKFSRPTDARRVFDEMAVRDSISYNTIICGYLNLEMHEASVRIFLENLDQ 304

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           FKPD+LT +S+LRACGH+ DL L  YV
Sbjct: 305 FKPDILTASSILRACGHLRDLGLAKYV 331



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVRF 187
           V N L+ MY ++  LG A++VF+ M  RD VSWN++I GYS    +++A++++ E+   +
Sbjct: 145 VGNALVDMYSRMGLLGRARQVFDAMPVRDLVSWNSLISGYSSHGYYEEALEIYNELKKYW 204

Query: 188 -KPDLLTITSVLRACGHM 238
             PD  T++SVL A  ++
Sbjct: 205 IVPDSFTVSSVLPAFANL 222


>ref|XP_002318172.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222858845|gb|EEE96392.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 617

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMVVR- 184
           VN+ LI+MY +   +G A+KVF+EMG+RD VSWN+MI GYS++   K+AI LF EM    
Sbjct: 165 VNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEG 224

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           F+PD +T+ SVL ACG + DL LG +V
Sbjct: 225 FEPDEMTLVSVLGACGDLGDLGLGRWV 251



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           + + LI MY K   L  A++VF+ M  +D V+WN +I GY+Q     +AI LF  M    
Sbjct: 266 MGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAG 325

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD +T+  VL AC  +  L+LG +V
Sbjct: 326 PHPDRVTMIEVLSACSTIGALDLGKWV 352


>emb|CBI31859.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMV-VR 184
           + N LI MY +L +L  A+K+F+ M +RD +SW +MI GYSQ S F DA+KLF+EM+  +
Sbjct: 162 LGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAK 221

Query: 185 FKPDLLTITSVLRACGHMEDLELG 256
            KPD +T+ SVL AC H+  L++G
Sbjct: 222 VKPDKVTVASVLSACAHLGKLDVG 245



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           V+N LI MY     LG AQK+F+ M +RD VSWNT+ICGYSQ + +K+ ++LF  M    
Sbjct: 61  VSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAAN 120

Query: 185 FKPDLLTITSVLRACGHMEDLE 250
            K D +T+  ++ AC H+ D E
Sbjct: 121 IKADAVTMVKIILACSHLGDWE 142


>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/87 (48%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           V + LI+MY +   LGCA++VF+E+ E+D VSWN+MI GYS++    DA+ LF EM    
Sbjct: 163 VRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAG 222

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
           F+PD +T+ S+L ACG + DL LG+++
Sbjct: 223 FEPDEMTLVSILGACGDLGDLGLGSWI 249



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREM-VVR 184
           V + LI MY K   L  A++VF+ M ++D V+WN MI GY+Q  +  +AI LF  M    
Sbjct: 264 VGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESG 323

Query: 185 FKPDLLTITSVLRACGHMEDLELGTYV 265
             PD +T+  VL AC  +  L+ G ++
Sbjct: 324 VNPDKITLVGVLSACASIGALDFGKWL 350


>ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327342|gb|EFH57762.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 669

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
 Frame = +2

Query: 8   VNNGLISMYFKLESLGCAQKVFNEMGERDCVSWNTMICGYSQLSMFKDAIKLFREMV--V 181
           V NGLI+ Y K +++  A+KVF+EM +RD VSWN+MI GYSQ   F+D  KL++ M+   
Sbjct: 169 VGNGLITYYTKCDNIESARKVFDEMSDRDVVSWNSMISGYSQSGSFEDCKKLYKAMLGCS 228

Query: 182 RFKPDLLTITSVLRACGHMEDLELGTYV 265
            FKP+ +T+ SVL+ACG   DL  G  V
Sbjct: 229 DFKPNEVTVISVLQACGQSSDLVFGMEV 256