BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00059573
         (434 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                53   2e-11
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    52   6e-09

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = -3

Query: 294 IAKE*DDSLHSISVRLDDKKF---ILVMKKFLKEMKL*NHVIVVSTKPTNQTNEKHAAFL 124
           +A E DDSL S+SVRLD K +     VM+ FLK  K+  +V      P N T E     +
Sbjct: 1   MATERDDSLQSVSVRLDGKNYSYWSYVMRNFLKGKKMWGYVSGTYVVPKN-TEEGDTVSI 59

Query: 123 DT*DANNSKIIT*ITN 76
           DT +ANN+KIIT I N
Sbjct: 60  DTWEANNAKIITWINN 75



 Score = 41.2 bits (95), Expect(2) = 2e-11
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = -1

Query: 74  VEHLISTQLSKYETKKEVWDH*Q 6
           VEH I TQL+KYET KEVWDH Q
Sbjct: 77  VEHSIGTQLAKYETAKEVWDHLQ 99


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 52.4 bits (124), Expect(2) = 6e-09
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 285 E*DDSLHSISVRLDDKKFIL---VMKKFLKEMKL*NHVIVVSTKPTNQTNEKHAAFLDT* 115
           E DDS  SISVRLD   +     VM+ FLK   +  +V  V +KP N  +EK+   L++ 
Sbjct: 4   ERDDSXQSISVRLDGNNYSYWSYVMRNFLKGKXMXGYVSGVLSKPINDRDEKYIDMLESX 63

Query: 114 DANNSKIIT*ITN 76
           +ANNSKI+  I N
Sbjct: 64  EANNSKIJIXINN 76



 Score = 33.5 bits (75), Expect(2) = 6e-09
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -1

Query: 71  EHLISTQLSKYETKKEVWDH 12
           EH I  QL+KYE  K+VWDH
Sbjct: 79  EHSIGIQLAKYEIAKQVWDH 98