BLASTX nr result
ID: Cocculus23_contig00058950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00058950
(306 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containi... 151 8e-35
emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera] 149 3e-34
ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
gb|ABK26521.1| unknown [Picea sitchensis] 129 4e-28
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 128 9e-28
ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27
emb|CBI30968.3| unnamed protein product [Vitis vinifera] 127 1e-27
ref|XP_007201172.1| hypothetical protein PRUPE_ppa003481mg [Prun... 127 2e-27
ref|XP_003608051.1| Pentatricopeptide repeat-containing protein ... 127 2e-27
ref|XP_002864446.1| pentatricopeptide repeat-containing protein ... 127 2e-27
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 126 4e-27
ref|XP_006401350.1| hypothetical protein EUTSA_v10015484mg [Eutr... 126 4e-27
tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea ... 125 5e-27
ref|NP_001148047.1| LOC100281656 [Zea mays] gi|195615502|gb|ACG2... 125 5e-27
ref|XP_002308660.2| hypothetical protein POPTR_0006s26860g [Popu... 125 6e-27
ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group] g... 125 6e-27
ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Caps... 125 8e-27
ref|XP_007211285.1| hypothetical protein PRUPE_ppa002699mg [Prun... 125 8e-27
ref|XP_004960622.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea m... 124 1e-26
>ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 151 bits (382), Expect = 8e-35
Identities = 69/102 (67%), Positives = 88/102 (86%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
EK+VG WTAM+SG+A HGLG + +E FE MV SGVKPN VTFVALLSGC+H+GLV+EGL
Sbjct: 284 EKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLY 343
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y++RM+ +FG+ PT+EH+GCVVDLLGRAGLI +A + IS++P
Sbjct: 344 YFDRMESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMP 385
>emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 149 bits (377), Expect = 3e-34
Identities = 67/102 (65%), Positives = 88/102 (86%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
EK+VG WTAM+SG+A HGLG + +E FE MV SG+KP+ VTFVALLSGC+H+GLV+EGL
Sbjct: 283 EKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLY 342
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y++RM+ +FG+ PT+EH+GCVVDLLGRAGLI +A + IS++P
Sbjct: 343 YFDRMESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMP 384
>ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera] gi|298204853|emb|CBI34160.3| unnamed
protein product [Vitis vinifera]
Length = 471
Score = 129 bits (325), Expect = 3e-28
Identities = 57/102 (55%), Positives = 78/102 (76%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
E+NV WTAMI+G+A HG G ++EL ++MV GVKPN VTF +L S C HAGLV+EGL+
Sbjct: 279 ERNVLTWTAMITGLARHGRGKEALELLDEMVAYGVKPNAVTFTSLFSACCHAGLVEEGLQ 338
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
+ M+ +FG+ P I+HYGC+VDLLGRAG ++EA +F+ +P
Sbjct: 339 LFHSMRSKFGVTPGIQHYGCIVDLLGRAGHLKEAYDFVRGMP 380
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 129 bits (324), Expect = 4e-28
Identities = 59/102 (57%), Positives = 76/102 (74%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
E +V W AMISG+A HG G +V LFE M+++GVKPN +TFV +LSGC+HAGLVDEG
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y++ M + GI+P EHY C+VDL GRAG + EA FI+Q+P
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMP 162
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum lycopersicum]
Length = 844
Score = 128 bits (321), Expect = 9e-28
Identities = 53/102 (51%), Positives = 76/102 (74%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
++NV WT++I+G A HG HR+VELF M+ G+KPN VT++A+LS C+H GLVDEG +
Sbjct: 535 DRNVISWTSIITGFAKHGFAHRAVELFNQMLEDGIKPNEVTYIAVLSACSHVGLVDEGWK 594
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y++ M + GI P +EHY C+VDLLGR+G + +A +FI +P
Sbjct: 595 YFDSMSIDHGITPRMEHYACMVDLLGRSGSLEKAVQFIKSLP 636
>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 127 bits (320), Expect = 1e-27
Identities = 55/102 (53%), Positives = 79/102 (77%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
EK+V WT++I G+A +G G ++ELF+++ R G+ P+ +TFV +L C+H G+VDEG
Sbjct: 304 EKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD 363
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y++RMK E+GI P IEHYGC+VDLLGRAGL+++A EFI +P
Sbjct: 364 YFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMP 405
>emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 127 bits (320), Expect = 1e-27
Identities = 55/102 (53%), Positives = 79/102 (77%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
EK+V WT++I G+A +G G ++ELF+++ R G+ P+ +TFV +L C+H G+VDEG
Sbjct: 159 EKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD 218
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y++RMK E+GI P IEHYGC+VDLLGRAGL+++A EFI +P
Sbjct: 219 YFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMP 260
>ref|XP_007201172.1| hypothetical protein PRUPE_ppa003481mg [Prunus persica]
gi|462396572|gb|EMJ02371.1| hypothetical protein
PRUPE_ppa003481mg [Prunus persica]
Length = 571
Score = 127 bits (319), Expect = 2e-27
Identities = 56/101 (55%), Positives = 73/101 (72%)
Frame = +1
Query: 4 KNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLRY 183
K+V W++MISG+A HGL +ELF +MV+ GV+PN VTFV +L C H GLV EG Y
Sbjct: 263 KDVMAWSSMISGLAMHGLATECLELFSEMVKCGVRPNAVTFVGVLCACVHGGLVGEGKEY 322
Query: 184 YERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
+ RM EFG+ P I+HYGC+VDL GRAGL+REA + + +P
Sbjct: 323 FRRMDEEFGVKPLIQHYGCIVDLYGRAGLVREALKVVQSMP 363
>ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 763
Score = 127 bits (318), Expect = 2e-27
Identities = 57/100 (57%), Positives = 73/100 (73%)
Frame = +1
Query: 7 NVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLRYY 186
NV WTA+I+G A HG G ++ F M+ GV PN TFVA+LS C+HAGLVDEGL+++
Sbjct: 498 NVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFF 557
Query: 187 ERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
M+ + I PTIEHY CVVDLLGR+G ++EA EFI Q+P
Sbjct: 558 HSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMP 597
>ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297310281|gb|EFH40705.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 531
Score = 127 bits (318), Expect = 2e-27
Identities = 56/102 (54%), Positives = 78/102 (76%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
E+NV WT +I+G+ATHG G ++ +F+ MV++GVKPN VTF+A+LS C+H G VD G R
Sbjct: 313 ERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNR 372
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
++ M+ ++GI P IEHYGC++DLLGRAG +REA E I +P
Sbjct: 373 FFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMP 414
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 126 bits (316), Expect = 4e-27
Identities = 53/102 (51%), Positives = 75/102 (73%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
++NV WT++I+G A HG HR+VELF M+ G+KPN VT++A+LS C+H GLVDEG +
Sbjct: 540 DRNVISWTSIITGFAKHGFAHRAVELFNQMLEDGIKPNEVTYIAVLSACSHVGLVDEGWK 599
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y++ M GI P +EHY C+VDLLGR+G + +A +FI +P
Sbjct: 600 YFDSMSKNHGITPRMEHYACMVDLLGRSGSLEKAVQFIKSLP 641
>ref|XP_006401350.1| hypothetical protein EUTSA_v10015484mg [Eutrema salsugineum]
gi|557102440|gb|ESQ42803.1| hypothetical protein
EUTSA_v10015484mg [Eutrema salsugineum]
Length = 561
Score = 126 bits (316), Expect = 4e-27
Identities = 57/102 (55%), Positives = 77/102 (75%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
E+NV WT MI+G+ATHGLG ++ +F MV++GVKPN VTF+A+LS C+H GLV G
Sbjct: 333 ERNVVTWTTMITGLATHGLGAEALAMFNRMVKAGVKPNDVTFIAILSACSHVGLVGLGKC 392
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
+ M++++GI P IEHYGC++DLLGRAG IREA E ++P
Sbjct: 393 LFASMRWKYGIEPNIEHYGCMIDLLGRAGRIREAEEVSKRMP 434
>tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 125 bits (315), Expect = 5e-27
Identities = 52/99 (52%), Positives = 78/99 (78%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
+K+V WTAMISG+A +G G+ ++ +FE+M+RS V P+ TF +LS C+H+GLVDEG R
Sbjct: 301 QKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFR 360
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFIS 297
+++ M+ E+G+ P + HYGC+VDL+GRAGL+ EA EF++
Sbjct: 361 FFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVT 399
>ref|NP_001148047.1| LOC100281656 [Zea mays] gi|195615502|gb|ACG29581.1|
selenium-binding protein-like [Zea mays]
Length = 597
Score = 125 bits (315), Expect = 5e-27
Identities = 52/99 (52%), Positives = 78/99 (78%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
+K+V WTAMISG+A +G G+ ++ +FE+M+RS V P+ TF +LS C+H+GLVDEG R
Sbjct: 287 QKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFR 346
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFIS 297
+++ M+ E+G+ P + HYGC+VDL+GRAGL+ EA EF++
Sbjct: 347 FFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVT 385
>ref|XP_002308660.2| hypothetical protein POPTR_0006s26860g [Populus trichocarpa]
gi|550337158|gb|EEE92183.2| hypothetical protein
POPTR_0006s26860g [Populus trichocarpa]
Length = 487
Score = 125 bits (314), Expect = 6e-27
Identities = 54/102 (52%), Positives = 79/102 (77%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
E+N+ WT++I G+A HG G +V +FE+MVRSGV P+ V F+ LLS C+H+GLVD+G
Sbjct: 178 ERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKG 237
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y++ M+ +F I P IEHYGC+VD+L RAGL++EA +F+ ++P
Sbjct: 238 YFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMP 279
>ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR
repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa
Japonica Group] gi|215695208|dbj|BAG90399.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein
OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 125 bits (314), Expect = 6e-27
Identities = 54/102 (52%), Positives = 78/102 (76%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
++NV WT+MISG+A HG R++ LF DM+ +GVKPN VT++A+LS C+H GLV EG
Sbjct: 513 DRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKE 572
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y+ M+ + G+ P +EHY C+VDLL R+GL++EA EFI+++P
Sbjct: 573 YFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMP 614
>ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Capsella rubella]
gi|482573205|gb|EOA37392.1| hypothetical protein
CARUB_v10011264mg [Capsella rubella]
Length = 811
Score = 125 bits (313), Expect = 8e-27
Identities = 54/102 (52%), Positives = 80/102 (78%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
E++V W AMI G THG+G ++ELFE+M + VKPN VTF++++S C+H+GLV+ GL+
Sbjct: 503 ERHVTTWNAMIDGYGTHGIGKAALELFEEMQKCTVKPNGVTFLSVISACSHSGLVEAGLK 562
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y+ RM+ ++ I P+++HYG +VDLLGRAGL+ EA +FI Q+P
Sbjct: 563 YFHRMQEDYSIEPSMDHYGAMVDLLGRAGLLNEAWDFIMQMP 604
>ref|XP_007211285.1| hypothetical protein PRUPE_ppa002699mg [Prunus persica]
gi|462407020|gb|EMJ12484.1| hypothetical protein
PRUPE_ppa002699mg [Prunus persica]
Length = 643
Score = 125 bits (313), Expect = 8e-27
Identities = 50/102 (49%), Positives = 79/102 (77%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
+K++ WT+MI+G A HG G + ++F DM SG++P+ +TF+++L C+HAGL+DEG
Sbjct: 333 KKSIISWTSMIAGFAMHGYGKEATQVFHDMEASGIRPDGITFISVLYACSHAGLIDEGCE 392
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
Y+ +M++ +GI P IEHYGC+VDL GRAG +++A +F+SQ+P
Sbjct: 393 YFSKMRYLYGIEPAIEHYGCMVDLYGRAGKLQKAYDFVSQLP 434
>ref|XP_004960622.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Setaria italica]
Length = 827
Score = 124 bits (312), Expect = 1e-26
Identities = 55/102 (53%), Positives = 78/102 (76%)
Frame = +1
Query: 1 EKNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLR 180
+ NV WT+MISG+A HG R++ELF DM+ +GVKPN VT++A+LS C+HAGLV EG
Sbjct: 517 DHNVISWTSMISGLAKHGYAERALELFYDMISAGVKPNDVTYIAVLSACSHAGLVKEGKE 576
Query: 181 YYERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
++ M+ G+ P +EHY C+VDLLGR+GL+ EA +FI+++P
Sbjct: 577 HFRMMQKGHGLIPRMEHYACMVDLLGRSGLVEEALDFINEMP 618
>tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 124 bits (312), Expect = 1e-26
Identities = 58/101 (57%), Positives = 74/101 (73%)
Frame = +1
Query: 4 KNVGVWTAMISGMATHGLGHRSVELFEDMVRSGVKPNVVTFVALLSGCTHAGLVDEGLRY 183
K WT+MI MA HGLG ++V LFE+MVR GVKP+ +T+V +LS C HAG VD+G RY
Sbjct: 679 KETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRY 738
Query: 184 YERMKFEFGIAPTIEHYGCVVDLLGRAGLIREAAEFISQIP 306
YE+M+ E GI P + HY C+VDL RAGL+ EA EFI ++P
Sbjct: 739 YEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMP 779