BLASTX nr result
ID: Cocculus23_contig00058940
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00058940
(216 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat... 70 3e-10
emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera] 70 3e-10
gb|EYU28825.1| hypothetical protein MIMGU_mgv1a026931mg [Mimulus... 70 4e-10
ref|XP_006438782.1| hypothetical protein CICLE_v10033549mg [Citr... 69 5e-10
ref|XP_006348719.1| PREDICTED: putative pentatricopeptide repeat... 68 1e-09
ref|XP_004239080.1| PREDICTED: putative pentatricopeptide repeat... 66 4e-09
ref|XP_002512122.1| pentatricopeptide repeat-containing protein,... 63 4e-08
ref|XP_007045955.1| Pentatricopeptide repeat-containing protein,... 62 8e-08
gb|EXB65067.1| hypothetical protein L484_004243 [Morus notabilis] 61 1e-07
gb|EYU19608.1| hypothetical protein MIMGU_mgv1a003193mg [Mimulus... 59 5e-07
ref|XP_007219220.1| hypothetical protein PRUPE_ppa017678mg, part... 59 9e-07
ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 59 9e-07
ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat... 59 9e-07
ref|XP_006382294.1| hypothetical protein POPTR_0005s00730g, part... 58 1e-06
ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|NP_564961.1| pentatricopeptide repeat-containing protein [Ar... 58 1e-06
gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japo... 58 1e-06
gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indi... 58 1e-06
ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group] g... 58 1e-06
ref|XP_006307028.1| hypothetical protein CARUB_v10008614mg [Caps... 58 2e-06
>ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2
Query: 38 QDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
+++ I WN+LI++++RN EAL LFVQ+ GL+PDS++LASSLSACG I +S+LG
Sbjct: 365 KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 423
>emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2
Query: 38 QDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
+++ I WN+LI++++RN EAL LFVQ+ GL+PDS++LASSLSACG I +S+LG
Sbjct: 562 KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 620
>gb|EYU28825.1| hypothetical protein MIMGU_mgv1a026931mg [Mimulus guttatus]
Length = 709
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +2
Query: 8 KIFDLNINASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSAC 187
+IFD +QD+ I WN LI+ Y R + EA+ LF+++ ++G+ PDSF LAS+LSAC
Sbjct: 315 RIFD----TTQDKHIVSWNILISGYVRENMPEEAISLFLEMLINGIFPDSFALASALSAC 370
Query: 188 GDIGYSELG 214
G IG+SELG
Sbjct: 371 GIIGHSELG 379
>ref|XP_006438782.1| hypothetical protein CICLE_v10033549mg [Citrus clementina]
gi|557540978|gb|ESR52022.1| hypothetical protein
CICLE_v10033549mg [Citrus clementina]
Length = 745
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/63 (53%), Positives = 46/63 (73%)
Frame = +2
Query: 26 INASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYS 205
I+A +R I WN LI+ Y+R +S EAL L VQ+ GL+PDSF++ASSLSACG++G
Sbjct: 360 IHAIGERNILSWNMLISEYARKGMSKEALELLVQMQTWGLMPDSFSVASSLSACGNVGSL 419
Query: 206 ELG 214
+LG
Sbjct: 420 QLG 422
>ref|XP_006348719.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Solanum tuberosum]
gi|565405237|ref|XP_006368014.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g69350,
mitochondrial-like [Solanum tuberosum]
Length = 753
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +2
Query: 32 ASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSEL 211
+SQDR I WN LI+ Y + S +AL LFV + G+LPDS+TLAS LSA GDIG+SE
Sbjct: 362 SSQDRHIISWNMLISGYVQEGFSDKALTLFVDMVRKGILPDSYTLASVLSASGDIGFSEF 421
Query: 212 G 214
G
Sbjct: 422 G 422
>ref|XP_004239080.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Solanum lycopersicum]
Length = 753
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +2
Query: 32 ASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSEL 211
+SQDR I WN LI+ Y + S +AL LFV + G+LPDS+TLAS LSA GDIG+S+
Sbjct: 362 SSQDRHIVSWNMLISGYVQEGFSDKALTLFVDMVRKGILPDSYTLASVLSASGDIGFSKF 421
Query: 212 G 214
G
Sbjct: 422 G 422
>ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549302|gb|EEF50791.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 800
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +2
Query: 44 RKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
R I WN LI+VY+ L EALG+FVQ+ G +PDSF+L+SS+SAC ++G LG
Sbjct: 365 RNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLG 421
>ref|XP_007045955.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508709890|gb|EOY01787.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 830
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +2
Query: 44 RKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
R I WN LI++YS+ L EAL LFVQ+ GL+PD+F+LASSLSAC G + G
Sbjct: 368 RNIVSWNMLISIYSQKGLLTEALVLFVQMQTRGLMPDTFSLASSLSACAGGGLLQFG 424
>gb|EXB65067.1| hypothetical protein L484_004243 [Morus notabilis]
Length = 792
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/60 (43%), Positives = 44/60 (73%)
Frame = +2
Query: 35 SQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
+++ I WN++I+ Y+R S EAL F ++ + G++PDSF+L+SSL+ACG++G +LG
Sbjct: 361 TRENNIVPWNTIISCYARQGFSREALLFFREMQVRGIMPDSFSLSSSLTACGNVGLLQLG 420
>gb|EYU19608.1| hypothetical protein MIMGU_mgv1a003193mg [Mimulus guttatus]
Length = 601
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Frame = +2
Query: 29 NASQDRKIFL---------WNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLS 181
N + +KIFL WN +IA+YS N +S EA+GL+ Q+ G+ PD+ T+AS L
Sbjct: 178 NVAFVKKIFLDMAKEELVAWNVMIAMYSNNSMSSEAVGLYSQMESRGIKPDAITIASVLP 237
Query: 182 ACGDIGYSELG 214
+CGD+ LG
Sbjct: 238 SCGDLSAVSLG 248
>ref|XP_007219220.1| hypothetical protein PRUPE_ppa017678mg, partial [Prunus persica]
gi|462415682|gb|EMJ20419.1| hypothetical protein
PRUPE_ppa017678mg, partial [Prunus persica]
Length = 640
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +2
Query: 44 RKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
+ + WN +IAVY N + GEA+ LF+QL + G+ PD+ T+AS L ACGD+ LG
Sbjct: 231 KSLVSWNVMIAVYVNNSMPGEAVDLFLQLEVSGIEPDAVTIASVLPACGDLSALLLG 287
>ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +2
Query: 44 RKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
R I +WN+LI+VY++ L E + LFV++ G +PDSF+LASSLSA G+ G +LG
Sbjct: 366 RGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLG 422
>ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +2
Query: 44 RKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
R I +WN+LI+VY++ L E + LFV++ G +PDSF+LASSLSA G+ G +LG
Sbjct: 366 RGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLG 422
>ref|XP_006382294.1| hypothetical protein POPTR_0005s00730g, partial [Populus
trichocarpa] gi|550337649|gb|ERP60091.1| hypothetical
protein POPTR_0005s00730g, partial [Populus trichocarpa]
Length = 670
Score = 58.2 bits (139), Expect = 1e-06
Identities = 23/59 (38%), Positives = 41/59 (69%)
Frame = +2
Query: 38 QDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
+++ + WN +IAVY N + EA+ L++Q+ +HG+ PD+ +++S L ACGD+ + LG
Sbjct: 261 KEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLG 319
>ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 706
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +2
Query: 11 IFDLNINASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACG 190
IFD + D+ + W+S+I YS+N L+ EAL LF Q+ PD+FTL S LSAC
Sbjct: 404 IFDTTL----DKNVITWSSIICGYSQNGLAYEALQLFHQMRSESFSPDAFTLVSVLSACA 459
Query: 191 DIGYSELG 214
+G+ ++G
Sbjct: 460 SLGFLQVG 467
>ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical
protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein,
putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +2
Query: 41 DRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSACGDIGYSELG 214
DR I WNSLI++Y+ + +ALGLF Q+ + PD+FTLASS+SAC + G LG
Sbjct: 367 DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
>gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +2
Query: 8 KIFDLNINASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSAC 187
++FD I D+ I WN++I Y++N +S EA+ LF + + G+ PD TLA LSAC
Sbjct: 310 RVFDTII----DKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSAC 365
Query: 188 GDIGYSELG 214
+G ELG
Sbjct: 366 SAVGALELG 374
>gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +2
Query: 8 KIFDLNINASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSAC 187
++FD I D+ I WN++I Y++N +S EA+ LF + + G+ PD TLA LSAC
Sbjct: 310 RVFDTII----DKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSAC 365
Query: 188 GDIGYSELG 214
+G ELG
Sbjct: 366 SAVGALELG 374
>ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa
Japonica Group]
Length = 767
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +2
Query: 8 KIFDLNINASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSAC 187
++FD I D+ I WN++I Y++N +S EA+ LF + + G+ PD TLA LSAC
Sbjct: 310 RVFDTII----DKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSAC 365
Query: 188 GDIGYSELG 214
+G ELG
Sbjct: 366 SAVGALELG 374
>ref|XP_006307028.1| hypothetical protein CARUB_v10008614mg [Capsella rubella]
gi|482575739|gb|EOA39926.1| hypothetical protein
CARUB_v10008614mg [Capsella rubella]
Length = 611
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +2
Query: 8 KIFDLNINASQDRKIFLWNSLIAVYSRNCLSGEALGLFVQLHLHGLLPDSFTLASSLSAC 187
++F+ IN +DR + WN++I VYS+N S EA LF ++ G+ PD+ TL++ LSAC
Sbjct: 280 RVFNQMIN--KDRVV--WNAMITVYSQNGKSNEAFKLFSEMEKAGISPDAGTLSTLLSAC 335
Query: 188 GDIGYSELG 214
G +G ELG
Sbjct: 336 GSVGALELG 344