BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00058752
         (233 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38872.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_002511709.1| pentatricopeptide repeat-containing protein,...    91   1e-16
ref|XP_002511699.1| pentatricopeptide repeat-containing protein,...    91   1e-16
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]    91   2e-16
ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p...    89   5e-16
ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...    87   3e-15
ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...    85   1e-14
gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officin...    85   1e-14
ref|XP_006397715.1| hypothetical protein EUTSA_v10001360mg [Eutr...    84   2e-14
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea ...    83   4e-14
ref|XP_007155354.1| hypothetical protein PHAVU_003G194000g [Phas...    83   5e-14
ref|XP_007215365.1| hypothetical protein PRUPE_ppa005588mg [Prun...    82   6e-14
gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wall...    82   8e-14
gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pas...    82   8e-14
gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionem...    82   1e-13

>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/77 (59%), Positives = 58/77 (75%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           M+DGY K G+ D AR LF  MPE  RDV++ NAM+AGYVQNG  +EAL  FHD+L+   L
Sbjct: 290 MVDGYAKLGEIDIARGLFDEMPE--RDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKEL 347

Query: 53  VPDHATLVIALSAVAEL 3
            PD+ATL+I LSA+A+L
Sbjct: 348 FPDNATLLITLSAIAQL 364


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/77 (59%), Positives = 58/77 (75%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           M+DGY K G+ D AR LF  MPE  RDV++ NAM+AGYVQNG  +EAL  FHD+L+   L
Sbjct: 290 MVDGYAKLGEIDIARGLFDEMPE--RDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKEL 347

Query: 53  VPDHATLVIALSAVAEL 3
            PD+ATL+I LSA+A+L
Sbjct: 348 FPDNATLLITLSAIAQL 364


>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/77 (59%), Positives = 58/77 (75%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           M+DGY K GK D AR  F  MP   RDV++ NA++AGYV+NG CLEAL++FHD+L  +SL
Sbjct: 290 MVDGYAKIGKIDIARRYFDDMPV--RDVISCNAIMAGYVKNGHCLEALKVFHDMLRGNSL 347

Query: 53  VPDHATLVIALSAVAEL 3
            PD  T ++ALSAVAEL
Sbjct: 348 APDSTTALLALSAVAEL 364


>ref|XP_002511709.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548889|gb|EEF50378.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 450

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/77 (58%), Positives = 57/77 (74%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           M+DGY K G  D AR  F  MP+  RDVV  NAM++GYVQNG C+EAL +FHD+   S+L
Sbjct: 268 MVDGYAKLGYVDIARKFFDNMPD--RDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNL 325

Query: 53  VPDHATLVIALSAVAEL 3
            PD+ATL+I LSA+A+L
Sbjct: 326 CPDNATLLIVLSAIAQL 342


>ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548879|gb|EEF50368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 474

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/77 (58%), Positives = 57/77 (74%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           M+DGY K G  D AR  F  MP+  RDVV  NAM++GYVQNG C+EAL +FHD+   S+L
Sbjct: 292 MVDGYAKLGYVDIARKFFDNMPD--RDVVACNAMMSGYVQNGYCMEALGIFHDMQRESNL 349

Query: 53  VPDHATLVIALSAVAEL 3
            PD+ATL+I LSA+A+L
Sbjct: 350 CPDNATLLIVLSAIAQL 366


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 45/77 (58%), Positives = 57/77 (74%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           M+DGY K G+ D AR LF  MPE  RDV++ NAM+AGYVQNG  +EAL  FHD+L+   L
Sbjct: 346 MVDGYAKLGEIDIARGLFDEMPE--RDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKEL 403

Query: 53  VPDHATLVIALSAVAEL 3
            P +ATL+I LSA+A+L
Sbjct: 404 FPXNATLLITLSAIAQL 420


>ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508704332|gb|EOX96228.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 637

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/77 (61%), Positives = 56/77 (72%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MI+GY K GK D AR LF  MPE  RDVV  NAM+ GYVQNG C EALE+F+ L    +L
Sbjct: 290 MINGYAKVGKIDLARRLFDEMPE--RDVVVCNAMMGGYVQNGYCSEALEIFYHLQRYDNL 347

Query: 53  VPDHATLVIALSAVAEL 3
            PD+ATL+I LSA+A+L
Sbjct: 348 QPDNATLLIVLSAIAQL 364


>ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Solanum lycopersicum]
          Length = 625

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 45/77 (58%), Positives = 58/77 (75%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           M+DGY K GK D AR  F  MP   RDV++ NA++AGYV+NG CLEAL++FHD+L+ SS 
Sbjct: 290 MVDGYAKIGKIDIARRYFDDMPV--RDVISCNAIMAGYVKNGHCLEALKVFHDMLSDSSP 347

Query: 53  VPDHATLVIALSAVAEL 3
            PD  T ++ALSAV+EL
Sbjct: 348 APDSTTALLALSAVSEL 364


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323642|gb|EEE99034.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 643

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/77 (57%), Positives = 58/77 (75%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G+ D AR LF  MPE  RDVV +NAM+ GYVQNG C+EAL +F+ + +  + 
Sbjct: 295 MIDGYAKNGRVDIARSLFDEMPE--RDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNF 352

Query: 53  VPDHATLVIALSAVAEL 3
           + D+ATL+IALSA+A+L
Sbjct: 353 LLDNATLLIALSAIAQL 369


>ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cicer arietinum]
          Length = 630

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G    A  LF  MP  +RDVV  N+M+AGYVQNG C+EAL+LFHD+   + +
Sbjct: 297 MIDGYAKLGDIVAATSLFDGMP--RRDVVCCNSMMAGYVQNGYCIEALKLFHDMRRATDM 354

Query: 53  VPDHATLVIALSAVAEL 3
           +PD+ TL+I L+AVA+L
Sbjct: 355 LPDNTTLLIVLTAVAQL 371


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 47/77 (61%), Positives = 55/77 (71%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MI+GY K GK D AR LF  M E  RD+V  NAM+AG VQNG C EALE+F+ L    SL
Sbjct: 290 MINGYAKVGKIDLARSLFNEMSE--RDIVVCNAMMAGCVQNGYCGEALEIFYHLPRNCSL 347

Query: 53  VPDHATLVIALSAVAEL 3
            PD ATL+IALSA+A+L
Sbjct: 348 QPDSATLLIALSAIAQL 364


>gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
          Length = 614

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 44/77 (57%), Positives = 54/77 (70%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G   KA+ LF +MP   RDVV +N+M+AGYVQN   +EALE+F D+   S L
Sbjct: 290 MIDGYAKLGFVHKAKTLFDQMPH--RDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHL 347

Query: 53  VPDHATLVIALSAVAEL 3
            PD  TLVI LSA+A+L
Sbjct: 348 TPDETTLVIVLSAIAQL 364


>ref|XP_006397715.1| hypothetical protein EUTSA_v10001360mg [Eutrema salsugineum]
           gi|557098788|gb|ESQ39168.1| hypothetical protein
           EUTSA_v10001360mg [Eutrema salsugineum]
          Length = 627

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 45/77 (58%), Positives = 56/77 (72%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G   KA+ LF +MP+  RDVV +N+M+AGYVQN   +EALE+F+D+   S L
Sbjct: 303 MIDGYAKLGFVHKAKSLFDQMPQ--RDVVAYNSMIAGYVQNRYHMEALEIFNDMEKESHL 360

Query: 53  VPDHATLVIALSAVAEL 3
            PD  TLVI LSAVA+L
Sbjct: 361 SPDETTLVIVLSAVAQL 377


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
           gi|449480068|ref|XP_004155790.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Cucumis sativus]
          Length = 638

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/77 (53%), Positives = 54/77 (70%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G    AR LF  MP+  +DVV +N ++AGY QNG   EALE+FH++   S+L
Sbjct: 293 MIDGYAKLGDIKVARTLFDEMPD--KDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNL 350

Query: 53  VPDHATLVIALSAVAEL 3
            PD  TLV+ALSA+++L
Sbjct: 351 SPDETTLVVALSAISQL 367


>gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
          Length = 588

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 44/77 (57%), Positives = 54/77 (70%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G   KA+ LF +MP   RDVV +N+M+AGYVQN   +EALE+F D+   S L
Sbjct: 264 MIDGYAKLGFVHKAKTLFDQMPH--RDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHL 321

Query: 53  VPDHATLVIALSAVAEL 3
            PD  TLVI LSA+A+L
Sbjct: 322 SPDETTLVIVLSAIAQL 338


>ref|XP_007155354.1| hypothetical protein PHAVU_003G194000g [Phaseolus vulgaris]
           gi|561028708|gb|ESW27348.1| hypothetical protein
           PHAVU_003G194000g [Phaseolus vulgaris]
          Length = 618

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G    AR LF  MP  +RDV++ N+M+AGYVQNG C+EAL++FHD+    ++
Sbjct: 285 MIDGYAKSGDVLAARRLFDEMP--RRDVISCNSMMAGYVQNGYCVEALKIFHDMKRAGNV 342

Query: 53  VPDHATLVIALSAVAEL 3
            PD  TL+I L+A A+L
Sbjct: 343 FPDDTTLLIVLTAFAQL 359


>ref|XP_007215365.1| hypothetical protein PRUPE_ppa005588mg [Prunus persica]
           gi|462411515|gb|EMJ16564.1| hypothetical protein
           PRUPE_ppa005588mg [Prunus persica]
          Length = 453

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/77 (55%), Positives = 57/77 (74%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MI+GY+K G  + AR LFG MP   RD++TWN+M+AGY  NG+ +EALELF ++L    +
Sbjct: 20  MINGYMKSGDFEMARQLFGLMPT--RDIITWNSMIAGYEFNGQFMEALELFQEILE-EDI 76

Query: 53  VPDHATLVIALSAVAEL 3
           +P HATLV ALSAV+ L
Sbjct: 77  MPSHATLVSALSAVSGL 93


>gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
          Length = 617

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G   +A+ LF +MP   RDVV++N+M+AGYVQN   +EALE+F D+   S L
Sbjct: 293 MIDGYAKLGFVHQAKTLFDQMPH--RDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHL 350

Query: 53  VPDHATLVIALSAVAEL 3
            PD  TLVI LSA+A+L
Sbjct: 351 SPDETTLVIVLSAIAQL 367



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLE-ALELF-----HDL 72
           MIDGYVK G T+ AR LF  MPE  +++++WN+M++GY Q  + ++ A +LF      DL
Sbjct: 197 MIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDL 256

Query: 71  LTMSSLV 51
           ++ +S++
Sbjct: 257 ISWNSMI 263


>gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
          Length = 617

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G   +A+ LF +MP   RDVV++N+M+AGYVQN   +EALE+F D+   S L
Sbjct: 293 MIDGYAKLGFVHQAKTLFDQMPH--RDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHL 350

Query: 53  VPDHATLVIALSAVAEL 3
            PD  TLVI LSA+A+L
Sbjct: 351 SPDETTLVIVLSAIAQL 367


>gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
          Length = 587

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = -1

Query: 233 MIDGYVKFGKTDKARVLFGRMPENKRDVVTWNAMLAGYVQNGECLEALELFHDLLTMSSL 54
           MIDGY K G   KA+ LF +MP   RDVV +N+M+AGYVQN   +EALE+F+++   S L
Sbjct: 267 MIDGYAKLGFVHKAKTLFDQMPH--RDVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHL 324

Query: 53  VPDHATLVIALSAVAEL 3
            PD  TLVI LSA+A+L
Sbjct: 325 SPDETTLVIVLSAIAQL 341