BLASTX nr result
ID: Cocculus23_contig00058666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00058666
(411 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB31972.1| Structural maintenance of chromosomes protein 4 [... 99 5e-19
ref|XP_004293216.1| PREDICTED: structural maintenance of chromos... 98 1e-18
ref|XP_006431152.1| hypothetical protein CICLE_v10010934mg [Citr... 98 1e-18
ref|XP_006373322.1| hypothetical protein POPTR_0017s11950g [Popu... 98 1e-18
ref|XP_007217653.1| hypothetical protein PRUPE_ppa000362mg [Prun... 98 1e-18
ref|XP_002323859.1| hypothetical protein POPTR_0017s11950g [Popu... 98 1e-18
ref|XP_002534418.1| Structural maintenance of chromosome, putati... 97 3e-18
ref|XP_006482597.1| PREDICTED: structural maintenance of chromos... 96 4e-18
ref|XP_007151232.1| hypothetical protein PHAVU_004G029000g [Phas... 96 7e-18
ref|XP_007032539.1| Structural maintenance of chromosome 3 isofo... 96 7e-18
ref|XP_007032538.1| Structural maintenance of chromosome 3 isofo... 96 7e-18
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos... 96 7e-18
emb|CBI22212.3| unnamed protein product [Vitis vinifera] 96 7e-18
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos... 95 9e-18
ref|XP_006395325.1| hypothetical protein EUTSA_v10003529mg [Eutr... 94 2e-17
ref|XP_006593676.1| PREDICTED: structural maintenance of chromos... 94 2e-17
ref|XP_006593675.1| PREDICTED: structural maintenance of chromos... 94 2e-17
ref|NP_199671.1| structural maintenance of chromosomes protein 4... 94 2e-17
ref|NP_001190492.1| structural maintenance of chromosomes protei... 94 2e-17
gb|EYU34070.1| hypothetical protein MIMGU_mgv1a000335mg [Mimulus... 93 4e-17
>gb|EXB31972.1| Structural maintenance of chromosomes protein 4 [Morus notabilis]
Length = 1239
Score = 99.4 bits (246), Expect = 5e-19
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSFAVC+NAA
Sbjct: 1190 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCENAA 1239
>ref|XP_004293216.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Fragaria vesca subsp. vesca]
Length = 1243
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITIDPG F VC+NAA
Sbjct: 1193 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITIDPGKFVVCENAA 1242
>ref|XP_006431152.1| hypothetical protein CICLE_v10010934mg [Citrus clementina]
gi|567877127|ref|XP_006431153.1| hypothetical protein
CICLE_v10010934mg [Citrus clementina]
gi|557533209|gb|ESR44392.1| hypothetical protein
CICLE_v10010934mg [Citrus clementina]
gi|557533210|gb|ESR44393.1| hypothetical protein
CICLE_v10010934mg [Citrus clementina]
Length = 1239
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+NAA
Sbjct: 1190 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFTVCENAA 1239
>ref|XP_006373322.1| hypothetical protein POPTR_0017s11950g [Populus trichocarpa]
gi|550320084|gb|ERP51119.1| hypothetical protein
POPTR_0017s11950g [Populus trichocarpa]
Length = 1300
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+NAA
Sbjct: 1251 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCQNAA 1300
>ref|XP_007217653.1| hypothetical protein PRUPE_ppa000362mg [Prunus persica]
gi|462413803|gb|EMJ18852.1| hypothetical protein
PRUPE_ppa000362mg [Prunus persica]
Length = 1245
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+NAA
Sbjct: 1196 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCENAA 1245
>ref|XP_002323859.1| hypothetical protein POPTR_0017s11950g [Populus trichocarpa]
gi|222866861|gb|EEF03992.1| hypothetical protein
POPTR_0017s11950g [Populus trichocarpa]
Length = 1256
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+NAA
Sbjct: 1207 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCQNAA 1256
>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
gi|223525329|gb|EEF27966.1| Structural maintenance of
chromosome, putative [Ricinus communis]
Length = 1259
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC NAA
Sbjct: 1210 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNAA 1259
>ref|XP_006482597.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Citrus sinensis]
Length = 1241
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNA 148
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+NA
Sbjct: 1190 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFTVCENA 1238
>ref|XP_007151232.1| hypothetical protein PHAVU_004G029000g [Phaseolus vulgaris]
gi|561024541|gb|ESW23226.1| hypothetical protein
PHAVU_004G029000g [Phaseolus vulgaris]
Length = 1241
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+ AA
Sbjct: 1192 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1241
>ref|XP_007032539.1| Structural maintenance of chromosome 3 isoform 2 [Theobroma cacao]
gi|508711568|gb|EOY03465.1| Structural maintenance of
chromosome 3 isoform 2 [Theobroma cacao]
Length = 1239
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+ AA
Sbjct: 1190 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1239
>ref|XP_007032538.1| Structural maintenance of chromosome 3 isoform 1 [Theobroma cacao]
gi|508711567|gb|EOY03464.1| Structural maintenance of
chromosome 3 isoform 1 [Theobroma cacao]
Length = 1245
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+ AA
Sbjct: 1196 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1245
>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Vitis vinifera]
Length = 1486
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+ AA
Sbjct: 1437 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1486
>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
Length = 1253
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+ AA
Sbjct: 1204 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKAA 1253
>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Glycine max]
Length = 1242
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF +C+ AA
Sbjct: 1193 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVICEKAA 1242
>ref|XP_006395325.1| hypothetical protein EUTSA_v10003529mg [Eutrema salsugineum]
gi|557091964|gb|ESQ32611.1| hypothetical protein
EUTSA_v10003529mg [Eutrema salsugineum]
Length = 1246
Score = 94.4 bits (233), Expect = 2e-17
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSFAVC+ +
Sbjct: 1196 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQKTS 1245
>ref|XP_006593676.1| PREDICTED: structural maintenance of chromosomes protein 4-like
isoform X2 [Glycine max]
Length = 1084
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNA 148
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+ A
Sbjct: 1035 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1083
>ref|XP_006593675.1| PREDICTED: structural maintenance of chromosomes protein 4-like
isoform X1 [Glycine max]
Length = 1242
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNA 148
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+ A
Sbjct: 1193 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1241
>ref|NP_199671.1| structural maintenance of chromosomes protein 4 [Arabidopsis
thaliana] gi|75333958|sp|Q9FJL0.1|SMC4_ARATH RecName:
Full=Structural maintenance of chromosomes protein 4;
Short=AtSMC4; Short=SMC protein 4; Short=SMC-4; AltName:
Full=Chromosome-associated protein C; Short=AtCAP-C
gi|10177350|dbj|BAB10693.1| chromosome condensation
protein [Arabidopsis thaliana]
gi|332008311|gb|AED95694.1| structural maintenance of
chromosomes protein 4 [Arabidopsis thaliana]
Length = 1241
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCK 142
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSFAVC+
Sbjct: 1191 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQ 1237
>ref|NP_001190492.1| structural maintenance of chromosomes protein 4 [Arabidopsis
thaliana] gi|332008312|gb|AED95695.1| structural
maintenance of chromosomes protein 4 [Arabidopsis
thaliana]
Length = 1244
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCK 142
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSFAVC+
Sbjct: 1194 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQ 1240
>gb|EYU34070.1| hypothetical protein MIMGU_mgv1a000335mg [Mimulus guttatus]
Length = 1243
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +2
Query: 2 RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAVCKNAA 151
RTKDAQF+IISLRNNMFELADRLVGIYKTDNCTKSITI+PGSF VC+ +
Sbjct: 1194 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEQVS 1243