BLASTX nr result
ID: Cocculus23_contig00058635
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00058635
(248 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36138.3| unnamed protein product [Vitis vinifera] 93 4e-17
ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helica... 93 4e-17
ref|XP_002516053.1| conserved hypothetical protein [Ricinus comm... 93 4e-17
emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera] 92 1e-16
ref|XP_007024164.1| RAD3-like DNA-binding helicase protein isofo... 87 2e-15
ref|XP_007024163.1| RAD3-like DNA-binding helicase protein isofo... 87 2e-15
ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago tr... 86 7e-15
ref|XP_002299703.1| hypothetical protein POPTR_0001s18290g [Popu... 84 2e-14
ref|XP_006465604.1| PREDICTED: probable ATP-dependent RNA helica... 84 2e-14
ref|XP_006465603.1| PREDICTED: probable ATP-dependent RNA helica... 84 2e-14
ref|XP_004306289.1| PREDICTED: probable ATP-dependent RNA helica... 82 6e-14
ref|XP_007216056.1| hypothetical protein PRUPE_ppa017676mg [Prun... 82 8e-14
ref|XP_006582830.1| PREDICTED: uncharacterized protein LOC100305... 81 1e-13
ref|XP_006426972.1| hypothetical protein CICLE_v10024822mg [Citr... 80 3e-13
ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helica... 79 7e-13
ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helica... 79 7e-13
gb|EXB74502.1| Putative ATP-dependent RNA helicase DDX11-like pr... 77 2e-12
ref|XP_002889321.1| hypothetical protein ARALYDRAFT_477275 [Arab... 75 7e-12
ref|XP_006833287.1| hypothetical protein AMTR_s00109p00029010 [A... 75 9e-12
ref|XP_004506847.1| PREDICTED: probable ATP-dependent RNA helica... 75 1e-11
>emb|CBI36138.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +3
Query: 6 EDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTG 185
+D S +P D E++ KS D SM+INDFLFSL+IDNINLVKL HY+KESNIIHKV+G
Sbjct: 384 KDTSLVDPGHDAEKAFGAKSASDSSMAINDFLFSLNIDNINLVKLLHYIKESNIIHKVSG 443
Query: 186 YGAKLIHSQRGPMLDNGEKS 245
YG K+ + ++G L++G +S
Sbjct: 444 YGDKVAYLRKGSALNDGGES 463
>ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
vinifera]
Length = 961
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +3
Query: 6 EDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTG 185
+D S +P D E++ KS D SM+INDFLFSL+IDNINLVKL HY+KESNIIHKV+G
Sbjct: 487 KDTSLVDPGHDAEKAFGAKSASDSSMAINDFLFSLNIDNINLVKLLHYIKESNIIHKVSG 546
Query: 186 YGAKLIHSQRGPMLDNGEKS 245
YG K+ + ++G L++G +S
Sbjct: 547 YGDKVAYLRKGSALNDGGES 566
>ref|XP_002516053.1| conserved hypothetical protein [Ricinus communis]
gi|223544958|gb|EEF46473.1| conserved hypothetical
protein [Ricinus communis]
Length = 282
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/80 (57%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 EEDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVT 182
E+D+ H N CQ E++ K+ +D SM+INDFLFSL+IDNINLVKL Y+K++NIIHKVT
Sbjct: 14 EKDLDHENICQVEEKAVEVKTAFDTSMAINDFLFSLNIDNINLVKLLEYIKDNNIIHKVT 73
Query: 183 GYGAKLIHSQRGPM-LDNGE 239
GYG K+ Q+ + +DNGE
Sbjct: 74 GYGEKVASLQKESVPIDNGE 93
>emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
Length = 914
Score = 91.7 bits (226), Expect = 1e-16
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +3
Query: 6 EDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTG 185
+D S +P D E++ KS D SM+INDFLFSL+IDNINLVKL HY+KESNIIHKV+G
Sbjct: 440 KDTSLVDPGHDAEKAFGAKSASDSSMAINDFLFSLNIDNINLVKLLHYIKESNIIHKVSG 499
Query: 186 YGAKLIHSQRGPMLDNGEKS 245
YG K+ + +G L++G +S
Sbjct: 500 YGDKVANLXKGSALNDGGES 519
>ref|XP_007024164.1| RAD3-like DNA-binding helicase protein isoform 2 [Theobroma cacao]
gi|508779530|gb|EOY26786.1| RAD3-like DNA-binding
helicase protein isoform 2 [Theobroma cacao]
Length = 873
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/80 (53%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 EEDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVT 182
++DV+ N C D + EK +D SM+INDFLFSL+IDNINL+K+ Y+KESNI+HKV+
Sbjct: 408 DKDVNCLNTCPDAQTGVGEKHRFDSSMAINDFLFSLNIDNINLMKVLQYIKESNIMHKVS 467
Query: 183 GYGAKLIHSQRGPML-DNGE 239
GYG K+ Q+G + +NGE
Sbjct: 468 GYGDKMTTLQKGSAVKENGE 487
>ref|XP_007024163.1| RAD3-like DNA-binding helicase protein isoform 1 [Theobroma cacao]
gi|508779529|gb|EOY26785.1| RAD3-like DNA-binding
helicase protein isoform 1 [Theobroma cacao]
Length = 912
Score = 87.4 bits (215), Expect = 2e-15
Identities = 43/80 (53%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 EEDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVT 182
++DV+ N C D + EK +D SM+INDFLFSL+IDNINL+K+ Y+KESNI+HKV+
Sbjct: 447 DKDVNCLNTCPDAQTGVGEKHRFDSSMAINDFLFSLNIDNINLMKVLQYIKESNIMHKVS 506
Query: 183 GYGAKLIHSQRGPML-DNGE 239
GYG K+ Q+G + +NGE
Sbjct: 507 GYGDKMTTLQKGSAVKENGE 526
>ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase
chl1 [Medicago truncatula]
Length = 1129
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/66 (59%), Positives = 54/66 (81%)
Frame = +3
Query: 3 EEDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVT 182
E+D + + C+DTE++S E+ DF+M+INDF+F L+IDNINLVKL Y+KESNI+HKV+
Sbjct: 427 EKDGNLMDSCRDTEQASEERRASDFTMAINDFVFELNIDNINLVKLLTYIKESNIMHKVS 486
Query: 183 GYGAKL 200
GYG K+
Sbjct: 487 GYGEKM 492
>ref|XP_002299703.1| hypothetical protein POPTR_0001s18290g [Populus trichocarpa]
gi|222846961|gb|EEE84508.1| hypothetical protein
POPTR_0001s18290g [Populus trichocarpa]
Length = 918
Score = 84.3 bits (207), Expect = 2e-14
Identities = 43/80 (53%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = +3
Query: 3 EEDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVT 182
++D+S+ N Q E ++ +K++ D S++INDFLFSL+IDNINLVKL Y+KESN++HKV+
Sbjct: 444 KKDLSNVNNYQAEEIAADKKAVCDTSIAINDFLFSLNIDNINLVKLLQYIKESNLVHKVS 503
Query: 183 GYGAKLIHSQRGPMLD-NGE 239
GYG K+ Q G L+ NGE
Sbjct: 504 GYGEKVASLQEGLALNRNGE 523
>ref|XP_006465604.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform
X2 [Citrus sinensis]
Length = 848
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = +3
Query: 33 QDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTGYGAKLIHSQ 212
QD+E S+ K +D S++IN+FLFSL+IDNINLVKL Y+KESNIIHKV+GYG K Q
Sbjct: 386 QDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQ 445
Query: 213 RGPMLDNG 236
+G +L +G
Sbjct: 446 KGSVLKDG 453
>ref|XP_006465603.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform
X1 [Citrus sinensis]
Length = 930
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = +3
Query: 33 QDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTGYGAKLIHSQ 212
QD+E S+ K +D S++IN+FLFSL+IDNINLVKL Y+KESNIIHKV+GYG K Q
Sbjct: 464 QDSENSTGAKHAFDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSGYGDKAASLQ 523
Query: 213 RGPMLDNG 236
+G +L +G
Sbjct: 524 KGSVLKDG 531
>ref|XP_004306289.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Fragaria
vesca subsp. vesca]
Length = 1168
Score = 82.4 bits (202), Expect = 6e-14
Identities = 40/78 (51%), Positives = 55/78 (70%)
Frame = +3
Query: 9 DVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTGY 188
D + + C T S+ + + SM+INDFLFSL+IDNINLVKL Y+KESNI+HK++GY
Sbjct: 441 DTGYDDSCHGTVTSAGKNDMPTSSMAINDFLFSLNIDNINLVKLLEYIKESNIMHKISGY 500
Query: 189 GAKLIHSQRGPMLDNGEK 242
G KL S++ LD+ E+
Sbjct: 501 GDKLASSEKSSPLDDSEE 518
>ref|XP_007216056.1| hypothetical protein PRUPE_ppa017676mg [Prunus persica]
gi|462412206|gb|EMJ17255.1| hypothetical protein
PRUPE_ppa017676mg [Prunus persica]
Length = 925
Score = 82.0 bits (201), Expect = 8e-14
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = +3
Query: 3 EEDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVT 182
++D S+ + C+ TE++S SM+INDFLFSL++DNINLVKL Y+KESNI+HKV+
Sbjct: 455 KDDRSYGDSCRATEKASGASGTSTSSMAINDFLFSLNVDNINLVKLLQYLKESNIMHKVS 514
Query: 183 GYGAKLIHSQRGPMLDNGEKSG 248
GYG K+ Q+ L NG + G
Sbjct: 515 GYGDKVASFQKNLAL-NGSEDG 535
>ref|XP_006582830.1| PREDICTED: uncharacterized protein LOC100305733 isoform X1 [Glycine
max]
Length = 1145
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +3
Query: 3 EEDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVT 182
++D + + C+DT ++S E DF+M+INDFLF L+IDNINLVKL Y+KESNI+HKV
Sbjct: 438 DKDGNLKDSCRDTAQASEESGACDFTMAINDFLFELNIDNINLVKLLKYIKESNIMHKVN 497
Query: 183 GYGAKL 200
GYG K+
Sbjct: 498 GYGEKV 503
>ref|XP_006426972.1| hypothetical protein CICLE_v10024822mg [Citrus clementina]
gi|557528962|gb|ESR40212.1| hypothetical protein
CICLE_v10024822mg [Citrus clementina]
Length = 928
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = +3
Query: 33 QDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTGYGAKLIHSQ 212
QD+E S+ K+ D S++IN+FLFSL+IDNINLVKL Y+KESNIIHKV+ YG K Q
Sbjct: 460 QDSENSTGAKNALDSSVAINEFLFSLNIDNINLVKLLKYIKESNIIHKVSRYGDKAASLQ 519
Query: 213 RGPMLDNG 236
+G +L +G
Sbjct: 520 KGSVLKDG 527
>ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
sativus]
Length = 1168
Score = 79.0 bits (193), Expect = 7e-13
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = +3
Query: 6 EDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTG 185
E+ S+ PCQ+ S+ + D+SM+INDFLFSL+IDNIN VKL Y+KESNI+HKV+G
Sbjct: 432 EEASYVEPCQND--STGKNGALDYSMAINDFLFSLNIDNINFVKLLQYIKESNIMHKVSG 489
Query: 186 YGAKLI 203
YG + I
Sbjct: 490 YGERTI 495
>ref|XP_004141844.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cucumis sativus]
Length = 914
Score = 79.0 bits (193), Expect = 7e-13
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = +3
Query: 6 EDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTG 185
E+ S+ PCQ+ S+ + D+SM+INDFLFSL+IDNIN VKL Y+KESNI+HKV+G
Sbjct: 446 EEASYVEPCQND--STGKNGALDYSMAINDFLFSLNIDNINFVKLLQYIKESNIMHKVSG 503
Query: 186 YGAKLI 203
YG + I
Sbjct: 504 YGERTI 509
>gb|EXB74502.1| Putative ATP-dependent RNA helicase DDX11-like protein 8 [Morus
notabilis]
Length = 923
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/66 (54%), Positives = 50/66 (75%)
Frame = +3
Query: 3 EEDVSHFNPCQDTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVT 182
E+D S+ +P QD E++S+ + S INDFLFSL++DNINL+KL Y+KESNI+HKV+
Sbjct: 449 EKDDSYTDPSQDIEKASKGNFAFCSSTDINDFLFSLNVDNINLIKLLQYLKESNIMHKVS 508
Query: 183 GYGAKL 200
YG K+
Sbjct: 509 AYGDKV 514
>ref|XP_002889321.1| hypothetical protein ARALYDRAFT_477275 [Arabidopsis lyrata subsp.
lyrata] gi|297335162|gb|EFH65580.1| hypothetical protein
ARALYDRAFT_477275 [Arabidopsis lyrata subsp. lyrata]
Length = 868
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +3
Query: 36 DTERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTGYGAKLIHSQR 215
DT S+ K SM+INDFLFSL+IDNINLVKL Y+KESNIIHKV+GYG ++ Q+
Sbjct: 416 DTGNPSKSKPCGACSMAINDFLFSLNIDNINLVKLLAYIKESNIIHKVSGYGERVAMLQK 475
Query: 216 GPM 224
P+
Sbjct: 476 DPV 478
>ref|XP_006833287.1| hypothetical protein AMTR_s00109p00029010 [Amborella trichopoda]
gi|548837963|gb|ERM98565.1| hypothetical protein
AMTR_s00109p00029010 [Amborella trichopoda]
Length = 914
Score = 75.1 bits (183), Expect = 9e-12
Identities = 35/67 (52%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 EEDVSHFNPCQDTE-RSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKV 179
+E+V+ C+ + + + E + + S+++NDFLFSL+IDN+NL+KLK Y+KESNI HKV
Sbjct: 432 KEEVNSVEHCKVIDAQQTEEPEMCNSSVTVNDFLFSLEIDNVNLIKLKEYVKESNITHKV 491
Query: 180 TGYGAKL 200
+GYGAKL
Sbjct: 492 SGYGAKL 498
>ref|XP_004506847.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform
X2 [Cicer arietinum]
Length = 914
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +3
Query: 42 ERSSREKSIYDFSMSINDFLFSLDIDNINLVKLKHYMKESNIIHKVTGYGAKL 200
E++S E+ F+M+INDFLF L+IDNINLVKL Y+KESNI+HKV+GYG KL
Sbjct: 452 EQASEERKTSGFTMTINDFLFELNIDNINLVKLVKYIKESNIMHKVSGYGEKL 504