BLASTX nr result

ID: Cocculus23_contig00058565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00058565
         (345 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
ref|XP_007226881.1| hypothetical protein PRUPE_ppa016715mg, part...    64   2e-08
ref|XP_006826862.1| hypothetical protein AMTR_s00010p00121230, p...    56   4e-06

>ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|297737690|emb|CBI26891.3| unnamed protein product
           [Vitis vinifera]
          Length = 610

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 17/95 (17%)
 Frame = -1

Query: 345 IKGYVKNEFFYDAIALHGLMHRH--------AFPFVLQGCAELVDVLCG----GEV---- 214
           +KGYVKN     A++++G M RH         FPFV++ CAEL ++  G    G V    
Sbjct: 107 MKGYVKNGIPDKAVSVYGKM-RHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHG 165

Query: 213 -DFDAIVRIELMIVYVKFGDLGSADYLFENMRKRN 112
            +F A VR ELMI+YVKFG+LG A++LF +M +R+
Sbjct: 166 LEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERD 200


>ref|XP_007226881.1| hypothetical protein PRUPE_ppa016715mg, partial [Prunus persica]
           gi|462423817|gb|EMJ28080.1| hypothetical protein
           PRUPE_ppa016715mg, partial [Prunus persica]
          Length = 574

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
 Frame = -1

Query: 345 IKGYVKNEFFYDAIALHGLMH-------RHAFPFVLQGCAELVDVLCGGEV--------- 214
           IK YVKN  F +A  ++  MH       +  + FV++ CAEL ++  G  V         
Sbjct: 71  IKAYVKNGIFTEAAFVYRQMHLLGVRPDQFTYTFVVKACAELPELWAGSAVLAHVVKYGL 130

Query: 213 DFDAIVRIELMIVYVKFGDLGSADYLFENMRKRN---WLLFL 97
           +F A+VR EL++++ KFG+LG AD+LFE M +R+   W  F+
Sbjct: 131 EFVAMVRTELILMFAKFGELGMADFLFETMVERDLIAWNAFI 172


>ref|XP_006826862.1| hypothetical protein AMTR_s00010p00121230, partial [Amborella
           trichopoda] gi|548831291|gb|ERM94099.1| hypothetical
           protein AMTR_s00010p00121230, partial [Amborella
           trichopoda]
          Length = 135

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 16/94 (17%)
 Frame = -1

Query: 345 IKGYVKNEFFYDAIALHGLMH-------RHAFPFVLQGCAELVDVLCGGEV--------- 214
           I+ Y K   F  A++L+  MH          FPFVL+ CA L+    G +V         
Sbjct: 23  IRSYYKTHLFSHALSLYDQMHVSNVRPDEFTFPFVLKACAGLIAQREGSQVHALIIKYGF 82

Query: 213 DFDAIVRIELMIVYVKFGDLGSADYLFENMRKRN 112
           D + IV+ EL+I+YV+FG+L  A+ +FE + KR+
Sbjct: 83  DSEDIVQTELIIMYVRFGELDFAERMFERIPKRD 116


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