BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00058543
         (305 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB88710.1| hypothetical protein L484_015395 [Morus notabilis]     104   1e-20
ref|XP_007027733.1| Pentatricopeptide repeat superfamily protein...   103   2e-20
ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat...   100   3e-19
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]   100   3e-19
ref|XP_007203510.1| hypothetical protein PRUPE_ppa024877mg [Prun...   100   4e-19
ref|XP_006576582.1| PREDICTED: pentatricopeptide repeat-containi...    86   5e-15
ref|XP_006576581.1| PREDICTED: pentatricopeptide repeat-containi...    86   5e-15
ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Popu...    86   5e-15
ref|XP_007210175.1| hypothetical protein PRUPE_ppa018038mg, part...    86   7e-15
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...    84   2e-14
ref|XP_006574136.1| PREDICTED: pentatricopeptide repeat-containi...    83   5e-14
ref|XP_004231259.1| PREDICTED: pentatricopeptide repeat-containi...    83   5e-14
emb|CBI37903.3| unnamed protein product [Vitis vinifera]               82   1e-13
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_007015798.1| Tetratricopeptide repeat-like superfamily pr...    81   2e-13
gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indi...    81   2e-13
gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Jap...    80   3e-13
ref|XP_007045237.1| Tetratricopeptide repeat-like superfamily pr...    79   5e-13
ref|XP_006347001.1| PREDICTED: pentatricopeptide repeat-containi...    79   7e-13
ref|XP_002525492.1| pentatricopeptide repeat-containing protein,...    79   9e-13

>gb|EXB88710.1| hypothetical protein L484_015395 [Morus notabilis]
          Length = 686

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = +3

Query: 57  DSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYV 236
           DS +L Q IQ  AQT+QL RGK+ HA+L+ A ++  CIF+TNHLINMYSKCG +  AH +
Sbjct: 10  DSKTLAQLIQTYAQTKQLNRGKEFHAQLLRA-NYPICIFMTNHLINMYSKCGLIDYAHNL 68

Query: 237 FEQMPHRNIFSWTSMISGFAQN 302
           FE+MP RNI SWT+MI+GF+QN
Sbjct: 69  FEKMPKRNIVSWTAMITGFSQN 90


>ref|XP_007027733.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508716338|gb|EOY08235.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 693

 Score =  103 bits (257), Expect = 2e-20
 Identities = 48/85 (56%), Positives = 67/85 (78%)
 Frame = +3

Query: 48  MLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSA 227
           MLKDS SL + +Q  AQT+QL +GKQ+H +LIS+G+ + C F+TNHL+NMYSKCG L  +
Sbjct: 13  MLKDSKSLARIVQNLAQTKQLHKGKQLHCQLISSGY-RLCTFLTNHLLNMYSKCGQLDYS 71

Query: 228 HYVFEQMPHRNIFSWTSMISGFAQN 302
             +FE+M  RN+ SWT+M++GF+QN
Sbjct: 72  IKLFEKMSQRNLVSWTAMVTGFSQN 96



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/74 (37%), Positives = 47/74 (63%)
 Frame = +3

Query: 81  IQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQMPHRN 260
           I+ CA    +  GKQ+H   +  G     IFV ++L++MYSKCG + +A+ VF++M  ++
Sbjct: 125 IKACASVGLVQFGKQMHCLALKFGFGFD-IFVGSNLVDMYSKCGVMVNAYKVFQEMECKD 183

Query: 261 IFSWTSMISGFAQN 302
              WT++I G+A+N
Sbjct: 184 EILWTALIDGYAKN 197



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/80 (35%), Positives = 46/80 (57%)
 Frame = +3

Query: 66  SLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQ 245
           +    I+ CA    L +G Q+HA++I         FV++ L++MY KCG L  +  VF++
Sbjct: 323 TFSSLIKACASQASLEQGAQLHAQVIKFNFDGNP-FVSSGLVDMYGKCGLLDDSIQVFDE 381

Query: 246 MPHRNIFSWTSMISGFAQNG 305
           + + N  +W SM+  FAQ+G
Sbjct: 382 IENANEIAWNSMLGVFAQHG 401


>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/85 (56%), Positives = 64/85 (75%)
 Frame = +3

Query: 48  MLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSA 227
           ML+D+ +L   IQ  A+T++L RGKQ+HA LI AG+   C F+TNHL+NMYSKCG+L  A
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGY-TPCTFLTNHLVNMYSKCGELDHA 59

Query: 228 HYVFEQMPHRNIFSWTSMISGFAQN 302
             +F+ MP RN+ SWT+MISG +QN
Sbjct: 60  LKLFDTMPQRNLVSWTAMISGLSQN 84



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)
 Frame = +3

Query: 81  IQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQMPHRN 260
           I+ CA    +  GKQ+H   +  G   + +FV ++L +MYSKCG +  A  VFE+MP ++
Sbjct: 113 IRACASLGSIEMGKQMHCLALKFGIGSE-LFVGSNLEDMYSKCGAMFDACKVFEEMPCKD 171

Query: 261 IFSWTSMISGFAQNG 305
             SWT+MI G+++ G
Sbjct: 172 EVSWTAMIDGYSKIG 186


>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/85 (56%), Positives = 64/85 (75%)
 Frame = +3

Query: 48  MLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSA 227
           ML+D+ +L   IQ  A+T++L RGKQ+HA LI AG+   C F+TNHL+NMYSKCG+L  A
Sbjct: 1   MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGY-TPCTFLTNHLVNMYSKCGELDHA 59

Query: 228 HYVFEQMPHRNIFSWTSMISGFAQN 302
             +F+ MP RN+ SWT+MISG +QN
Sbjct: 60  LKLFDTMPQRNLVSWTAMISGLSQN 84



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)
 Frame = +3

Query: 81  IQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQMPHRN 260
           I+ CA    +  GKQ+H   +  G   + +FV ++L +MYSKCG +  A  VFE+MP ++
Sbjct: 113 IRACASLGSIEMGKQMHCLALKFGIGSE-LFVGSNLEDMYSKCGAMFDACKVFEEMPCKD 171

Query: 261 IFSWTSMISGFAQNG 305
             SWT+MI G+++ G
Sbjct: 172 EVSWTAMIDGYSKIG 186


>ref|XP_007203510.1| hypothetical protein PRUPE_ppa024877mg [Prunus persica]
           gi|462399041|gb|EMJ04709.1| hypothetical protein
           PRUPE_ppa024877mg [Prunus persica]
          Length = 681

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 46/85 (54%), Positives = 66/85 (77%)
 Frame = +3

Query: 48  MLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSA 227
           ML+D+ +L Q IQ  A+T+QL RGK++HA+L+    +  CIF+ NHL+NMYSKCG++  A
Sbjct: 1   MLQDATTLAQTIQTYARTKQLNRGKELHAQLLRT-EYTPCIFLANHLLNMYSKCGEVDYA 59

Query: 228 HYVFEQMPHRNIFSWTSMISGFAQN 302
             VF++MP RN+ SWT+MI+GF+QN
Sbjct: 60  LKVFDKMPQRNLVSWTAMITGFSQN 84


>ref|XP_006576582.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like isoform X2 [Glycine max]
          Length = 690

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
 Frame = +3

Query: 33  FQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCI---FVTNHLINMYS 203
           F S H L D+ ++   IQ  A+T++L +GKQ+HA LI  G    C+   F++NH +N+YS
Sbjct: 5   FGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGG----CLPNTFLSNHFLNLYS 60

Query: 204 KCGDLGSAHYVFEQMPHRNIFSWTSMISGFAQN 302
           KCG+L     +F++M  RN+ SWTS+I+GFA N
Sbjct: 61  KCGELDYTIKLFDKMSQRNMVSWTSIITGFAHN 93



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 32/80 (40%), Positives = 47/80 (58%)
 Frame = +3

Query: 66  SLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQ 245
           +L   +Q C     +  G QVH  ++  G   + +FV ++L +MYSKCG+L  A   FE+
Sbjct: 117 ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCE-LFVGSNLTDMYSKCGELSDACKAFEE 175

Query: 246 MPHRNIFSWTSMISGFAQNG 305
           MP ++   WTSMI GF +NG
Sbjct: 176 MPCKDAVLWTSMIDGFVKNG 195


>ref|XP_006576581.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like isoform X1 [Glycine max]
          Length = 698

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
 Frame = +3

Query: 33  FQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCI---FVTNHLINMYS 203
           F S H L D+ ++   IQ  A+T++L +GKQ+HA LI  G    C+   F++NH +N+YS
Sbjct: 13  FGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGG----CLPNTFLSNHFLNLYS 68

Query: 204 KCGDLGSAHYVFEQMPHRNIFSWTSMISGFAQN 302
           KCG+L     +F++M  RN+ SWTS+I+GFA N
Sbjct: 69  KCGELDYTIKLFDKMSQRNMVSWTSIITGFAHN 101



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 32/80 (40%), Positives = 47/80 (58%)
 Frame = +3

Query: 66  SLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQ 245
           +L   +Q C     +  G QVH  ++  G   + +FV ++L +MYSKCG+L  A   FE+
Sbjct: 125 ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCE-LFVGSNLTDMYSKCGELSDACKAFEE 183

Query: 246 MPHRNIFSWTSMISGFAQNG 305
           MP ++   WTSMI GF +NG
Sbjct: 184 MPCKDAVLWTSMIDGFVKNG 203


>ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Populus trichocarpa]
           gi|550325453|gb|ERP53980.1| hypothetical protein
           POPTR_0013s10600g [Populus trichocarpa]
          Length = 636

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
 Frame = +3

Query: 30  WFQSSHMLKDSA-SLGQFIQFCAQTRQLARGKQVHARLISAGH-HQQCIFVTNHLINMYS 203
           +F S+  L  S  +       CA+   L +G+ +H  +IS  H + Q +FVTNHLINMY+
Sbjct: 53  FFYSTPQLNQSQQTYATLFHACARHGNLKQGQYLHQHMISENHKNPQDLFVTNHLINMYA 112

Query: 204 KCGDLGSAHYVFEQMPHRNIFSWTSMISGFAQNG 305
           KCGDL  A  VF++M  RN+ SWT++ISG+AQ+G
Sbjct: 113 KCGDLDRARQVFDEMGRRNVVSWTALISGYAQHG 146


>ref|XP_007210175.1| hypothetical protein PRUPE_ppa018038mg, partial [Prunus persica]
           gi|462405910|gb|EMJ11374.1| hypothetical protein
           PRUPE_ppa018038mg, partial [Prunus persica]
          Length = 577

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 38/91 (41%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
 Frame = +3

Query: 36  QSSHMLK-DSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCG 212
           +S+H+L  +  +  Q ++ C QT  L  GK +HA+L+  G      F+ NHL+NMY+KCG
Sbjct: 22  KSTHILPTEEETYSQLLRTCGQTSNLPHGKAIHAKLVK-GSLPFSPFLQNHLLNMYAKCG 80

Query: 213 DLGSAHYVFEQMPHRNIFSWTSMISGFAQNG 305
           DL +   +F++MPH+N+ SW+++I+GF Q+G
Sbjct: 81  DLSNGLQLFDEMPHKNVVSWSAVITGFVQHG 111



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = +3

Query: 66  SLGQFIQFCAQTRQLARGKQVHARLISAGHHQQC-IFVTNHLINMYSKCGDLGSAHYVFE 242
           +L   +  CA    L  GK+ H   I         + V N L++MY+KCG +  A  VF+
Sbjct: 336 TLATALNACANLASLDDGKKFHGLRIKLETSTDVDVCVDNALLDMYAKCGCMEGAWCVFQ 395

Query: 243 QMPHRNIFSWTSMISGFAQNG 305
            M  R++ SWT+MI G AQNG
Sbjct: 396 SMKDRSVVSWTTMIMGCAQNG 416


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/82 (48%), Positives = 53/82 (64%)
 Frame = +3

Query: 60  SASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVF 239
           S +L   +Q CA T+ L  GK VH  L   G  +   F+ NHLINMYSKCGD  SA+ VF
Sbjct: 50  SKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVF 109

Query: 240 EQMPHRNIFSWTSMISGFAQNG 305
           ++M  RN++SW  M+SG+A+ G
Sbjct: 110 DEMSTRNLYSWNGMLSGYAKLG 131



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 24/80 (30%), Positives = 50/80 (62%)
 Frame = +3

Query: 66  SLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQ 245
           S    +  C + ++L   KQ H +++ AG     + +++ +++ Y+KC ++G A  +F++
Sbjct: 185 SFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLV-ISSSVLDAYAKCSEMGDARRLFDE 243

Query: 246 MPHRNIFSWTSMISGFAQNG 305
           M  R++ +WT+M+SG+AQ G
Sbjct: 244 MIIRDVLAWTTMVSGYAQWG 263


>ref|XP_006574136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Glycine max]
          Length = 321

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 39/90 (43%), Positives = 59/90 (65%)
 Frame = +3

Query: 33  FQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCG 212
           F   H L D+  +   IQ  A+T++L +GKQ+HARLI  G    C F++N+ +N+YSKCG
Sbjct: 151 FGFGHKLSDTKIVAYLIQTFARTKELNKGKQLHARLIRGGF-LPCTFLSNNFLNLYSKCG 209

Query: 213 DLGSAHYVFEQMPHRNIFSWTSMISGFAQN 302
           +L     +F+++  RN+ SWT+MI+GF  N
Sbjct: 210 ELDYTIKLFDRVSKRNMISWTAMINGFVHN 239


>ref|XP_004231259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Solanum lycopersicum]
          Length = 602

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 38/83 (45%), Positives = 52/83 (62%)
 Frame = +3

Query: 57  DSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYV 236
           DS +L   IQ CA +R    GK +H  L + G      F+ NHLINMYSKCGD   A  V
Sbjct: 55  DSKTLAFIIQQCANSRSREEGKWIHLHLKTTGWKHPTTFLANHLINMYSKCGDHMEARKV 114

Query: 237 FEQMPHRNIFSWTSMISGFAQNG 305
           F++M  RN++SW +M+SG+ ++G
Sbjct: 115 FDKMTSRNLYSWNNMLSGYTKSG 137


>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +3

Query: 57  DSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYV 236
           DS +L   +Q CA +R L  GK+VH  L   G  +   F++NHLINMY+KCG    A  V
Sbjct: 58  DSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKV 117

Query: 237 FEQMPHRNIFSWTSMISGFAQNG 305
           F++M  RN++SW +M+SG+A+ G
Sbjct: 118 FDKMSARNLYSWNNMLSGYAKLG 140



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = +3

Query: 12  FTKVDLWFQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLI 191
           FTK+ L+    H+  D  +    +  CA    L  GKQ+HA L+        I V + LI
Sbjct: 312 FTKMMLF----HVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTI-VVSALI 366

Query: 192 NMYSKCGDLGSAHYVFEQMPHR-NIFSWTSMISGFAQNG 305
           +MYSKCG LG    VF+ M ++ ++  W ++IS  AQ+G
Sbjct: 367 DMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHG 405



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/80 (28%), Positives = 50/80 (62%)
 Frame = +3

Query: 66  SLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQ 245
           S    +  C + +++   +QVH +++ AG     + +++ +++ Y KCG +G A  +F++
Sbjct: 194 SFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVV-LSSSVLDAYVKCGLMGDARKLFDE 252

Query: 246 MPHRNIFSWTSMISGFAQNG 305
           M  R++ +WT+M+SG+A+ G
Sbjct: 253 MSARDVLAWTTMVSGYAKWG 272


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +3

Query: 57  DSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYV 236
           DS +L   +Q CA +R L  GK+VH  L   G  +   F++NHLINMY+KCG    A  V
Sbjct: 58  DSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKV 117

Query: 237 FEQMPHRNIFSWTSMISGFAQNG 305
           F++M  RN++SW +M+SG+A+ G
Sbjct: 118 FDKMSARNLYSWNNMLSGYAKLG 140



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = +3

Query: 12  FTKVDLWFQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLI 191
           FTK+ L+    H+  D  +    +  CA    L  GKQ+HA L+        I V + LI
Sbjct: 312 FTKMMLF----HVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTI-VVSALI 366

Query: 192 NMYSKCGDLGSAHYVFEQMPHR-NIFSWTSMISGFAQNG 305
           +MYSKCG LG    VF+ M ++ ++  W ++IS  AQ+G
Sbjct: 367 DMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHG 405



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/80 (28%), Positives = 50/80 (62%)
 Frame = +3

Query: 66  SLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQ 245
           S    +  C + +++   +QVH +++ AG     + +++ +++ Y KCG +G A  +F++
Sbjct: 194 SFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVV-LSSSVLDAYVKCGLMGDARKLFDE 252

Query: 246 MPHRNIFSWTSMISGFAQNG 305
           M  R++ +WT+M+SG+A+ G
Sbjct: 253 MSARDVLAWTTMVSGYAKWG 272


>ref|XP_007015798.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508786161|gb|EOY33417.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 961

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 34/90 (37%), Positives = 56/90 (62%)
 Frame = +3

Query: 33  FQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCG 212
           F +   + +     +F+  C QT  L  G+ +HA+ I  G     +++ NH++NMY KCG
Sbjct: 334 FHNHFSILEENLCSKFLTSCTQTSNLLHGQAIHAKFIK-GSIPHSLYLQNHILNMYLKCG 392

Query: 213 DLGSAHYVFEQMPHRNIFSWTSMISGFAQN 302
           DL + H +F++MP RN+ SW++M+SGF Q+
Sbjct: 393 DLINGHKLFDEMPERNVVSWSAMVSGFTQH 422



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/72 (45%), Positives = 41/72 (56%)
 Frame = +3

Query: 90  CAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQMPHRNIFS 269
           CA    L  GK+VH   I  G     + V N LI+MY+KCG +  A  VF+ M   +I S
Sbjct: 656 CANLAFLEEGKKVHGLRIKLGVEID-VCVDNALIDMYAKCGSMDGAWGVFKVMDDPSIVS 714

Query: 270 WTSMISGFAQNG 305
           WT+MI G AQNG
Sbjct: 715 WTTMIMGCAQNG 726


>gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +3

Query: 27  LWFQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSK 206
           LW   +     +  L   +Q C +   L RG+ +HARL+ +G      F+ NHLI MYS 
Sbjct: 9   LWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH 68

Query: 207 CGDLGSAHYVFEQMPHRNIFSWTSMISGFAQN 302
           C DL SA  +F  MP RN  SWT+++SG +QN
Sbjct: 69  CADLASALRLFAAMPRRNAVSWTTLVSGLSQN 100



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +3

Query: 27  LWFQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSK 206
           LW   +     +  L   +Q C +   L RG+ +HARL+ +G      F+ NHLI MYS 
Sbjct: 159 LWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH 218

Query: 207 CGDLGSAHYVFEQMPHRNIFSWTSMISGFAQN 302
           C DL SA  +F  MP RN  SWT+++SG +QN
Sbjct: 219 CADLASALRLFAAMPRRNAVSWTTLVSGLSQN 250



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 35/46 (76%)
 Frame = +3

Query: 168 IFVTNHLINMYSKCGDLGSAHYVFEQMPHRNIFSWTSMISGFAQNG 305
           +FV ++L +MYSKCG L  A  VF+QMP ++  +WT+MI G+A+NG
Sbjct: 306 LFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 351


>gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
           gi|31432781|gb|AAP54374.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 698

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/92 (41%), Positives = 52/92 (56%)
 Frame = +3

Query: 27  LWFQSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSK 206
           LW   +     +  L   +Q C +   L RG+ +HARL+ +G      F+ NHLI MYS 
Sbjct: 9   LWRPPAPDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH 68

Query: 207 CGDLGSAHYVFEQMPHRNIFSWTSMISGFAQN 302
           C DL SA  +F  MP RN  SWT+++SG +QN
Sbjct: 69  CADLASALRLFAAMPRRNAVSWTTLVSGLSQN 100



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/63 (44%), Positives = 42/63 (66%)
 Frame = +3

Query: 117 GKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQMPHRNIFSWTSMISGFA 296
           G Q+H   +  G   + +FV ++L +MYSKCG L  A  VF+QMP ++  +WT+MI G+A
Sbjct: 141 GAQLHCVGVRLGFDTE-LFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYA 199

Query: 297 QNG 305
           +NG
Sbjct: 200 KNG 202


>ref|XP_007045237.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508709172|gb|EOY01069.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 716

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 32/77 (41%), Positives = 53/77 (68%)
 Frame = +3

Query: 75  QFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQMPH 254
           + +Q   Q + L+RG+ VHAR+I +G    C++++N L+N Y+KCGDL  A  VFE + H
Sbjct: 12  ELVQITKQ-KNLSRGRAVHARIIRSGGSSSCVYLSNSLVNFYAKCGDLSKAKCVFENIQH 70

Query: 255 RNIFSWTSMISGFAQNG 305
           +++ SW  +I+G++Q G
Sbjct: 71  KDVVSWNCLINGYSQQG 87



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 33/90 (36%), Positives = 53/90 (58%)
 Frame = +3

Query: 36  QSSHMLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYSKCGD 215
           Q   ++ +  ++   ++ C+    L +GKQ+HA  I  G   + + + + L  MY+KCG+
Sbjct: 405 QIEGIVPNELTMASILKACSSLAALEQGKQIHACTIKHGFGLE-VPIGSALSTMYAKCGN 463

Query: 216 LGSAHYVFEQMPHRNIFSWTSMISGFAQNG 305
           L   + VF +MP R++ SW SMISG AQNG
Sbjct: 464 LEDGNLVFRRMPRRDVVSWNSMISGLAQNG 493



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
 Frame = +3

Query: 33  FQSSH---MLKDSASLGQFIQFCAQTRQLARGKQVHARLISAGHHQQCIFVTNHLINMYS 203
           F S H   ++    +L   +  C+ T  +  GKQVH  L+  G+  Q +++   L++MY+
Sbjct: 300 FSSMHFAGIMPSEFTLVGVLNACSDTGAVEDGKQVHGYLLKLGYESQ-VYIMTALVDMYA 358

Query: 204 KCGDLGSAHYVFEQMPHRNIFSWTSMISGFAQNG 305
           KCG   +A   F+ +   ++  WTSMI G+ QNG
Sbjct: 359 KCGCTLAARKGFDYLQEPDMVLWTSMIGGYVQNG 392


>ref|XP_006347001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Solanum tuberosum]
          Length = 607

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
 Frame = +3

Query: 90  CAQTRQLARGKQVHARLISAGH----HQQCIFVTNHLINMYSKCGDLGSAHYVFEQMPHR 257
           CA   +L  G+++H     + H    HQQ ++  NHL+NMY+KCGDL  AH++F+QM HR
Sbjct: 61  CACLHRLDIGQKLHHHYTLSHHQIPPHQQQLYTINHLLNMYAKCGDLEYAHHLFDQMLHR 120

Query: 258 NIFSWTSMISGFAQNG 305
           NI SWT +IS +AQ G
Sbjct: 121 NIVSWTCLISAYAQYG 136


>ref|XP_002525492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535171|gb|EEF36850.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 542

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
 Frame = +3

Query: 90  CAQTRQLARGKQVHARLI----SAGHHQQCIFVTNHLINMYSKCGDLGSAHYVFEQMPHR 257
           CA+   L +G  +H  L+    + G+    +FVTNHLINMY+KCGDL  A  +F +MP R
Sbjct: 71  CARHGYLQQGIYLHQHLLLNNKNQGNRPLGVFVTNHLINMYAKCGDLEYARQLFAEMPER 130

Query: 258 NIFSWTSMISGFAQNG 305
           N+ SWT++ISG+AQ+G
Sbjct: 131 NVVSWTALISGYAQHG 146