BLASTX nr result

ID: Cocculus23_contig00058541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00058541
         (361 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007048019.1| DNA polymerase III polC-type isoform 2 [Theo...    66   6e-09
ref|XP_006428146.1| hypothetical protein CICLE_v10026247mg [Citr...    62   1e-07
ref|XP_004504048.1| PREDICTED: uncharacterized protein Rv2191/MT...    58   1e-06
ref|XP_003524273.1| PREDICTED: uncharacterized protein LOC100805...    57   3e-06
ref|XP_003630055.1| DNA polymerase III polC-type [Medicago trunc...    56   5e-06

>ref|XP_007048019.1| DNA polymerase III polC-type isoform 2 [Theobroma cacao]
           gi|508700280|gb|EOX92176.1| DNA polymerase III polC-type
           isoform 2 [Theobroma cacao]
          Length = 277

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -2

Query: 360 SVPYTMSKFGKMTERMKDVLCKAQGRQPINNILKHSHLLLR 238
           +VPYT    GKMTER+K++LCKAQG QP+NN+LKHSH +LR
Sbjct: 237 TVPYTRGSLGKMTERVKNLLCKAQGSQPLNNLLKHSHSVLR 277


>ref|XP_006428146.1| hypothetical protein CICLE_v10026247mg [Citrus clementina]
           gi|568819439|ref|XP_006464260.1| PREDICTED:
           uncharacterized protein LOC102629602 [Citrus sinensis]
           gi|557530136|gb|ESR41386.1| hypothetical protein
           CICLE_v10026247mg [Citrus clementina]
          Length = 277

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = -2

Query: 360 SVPYTMSKFGKMTERMKDVLCKAQGRQPINNILKHSHLLLR 238
           +VPYT +  GKMTE +K++LCK+QG QP+N +LKHSH LLR
Sbjct: 237 AVPYTRTSLGKMTESVKNLLCKSQGSQPLNTLLKHSHSLLR 277


>ref|XP_004504048.1| PREDICTED: uncharacterized protein Rv2191/MT2247-like [Cicer
           arietinum]
          Length = 271

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -2

Query: 360 SVPYTMSKFGKMTERMKDVLCKAQGRQPINNILKHSHLLLR 238
           +VPY     GK+TERMK +LCKAQG+ P+  +LKHSH LLR
Sbjct: 231 NVPYARGSLGKVTERMKGLLCKAQGQAPLQQLLKHSHSLLR 271


>ref|XP_003524273.1| PREDICTED: uncharacterized protein LOC100805245 [Glycine max]
          Length = 276

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -2

Query: 360 SVPYTMSKFGKMTERMKDVLCKAQGRQPINNILKHSHLLLR 238
           +VPY     GK+TER+K +LCKAQG+ P+ ++LKHSH LLR
Sbjct: 236 TVPYARGSLGKVTERVKGLLCKAQGQPPLQHLLKHSHSLLR 276


>ref|XP_003630055.1| DNA polymerase III polC-type [Medicago truncatula]
           gi|355524077|gb|AET04531.1| DNA polymerase III polC-type
           [Medicago truncatula]
          Length = 281

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = -2

Query: 360 SVPYTMSKFGKMTERMKDVLCKAQGRQPINNILKHSHLLLR 238
           +VPY     GK+ ERMK +LCKAQG+ P+  +LKHSH LLR
Sbjct: 241 TVPYARGSLGKVAERMKGLLCKAQGQPPLQQLLKHSHSLLR 281


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