BLASTX nr result

ID: Cocculus23_contig00058390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00058390
         (375 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]    57   3e-06

>ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 618

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 373 VHKFLIGEASHPRSDEIYNIVDGLALQLQWAGHLPNLDFDL 251
           VHKFL+G+ SHPRSDE+Y+ +DGLAL   W G+   LDF++
Sbjct: 578 VHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGY--ELDFEI 616


>emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
          Length = 396

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -3

Query: 373 VHKFLIGEASHPRSDEIYNIVDGLALQLQWAGHLPNLDFDL 251
           VHKFL+G+ SHPRSDE+Y+ +DGLAL   W G+   LDF++
Sbjct: 356 VHKFLVGDTSHPRSDEVYSTIDGLALLSTWVGY--ELDFEI 394