BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00058291
         (392 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               127   3e-31
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]   113   2e-23
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]    105   9e-21
emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]    93   4e-17
emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]    91   1e-16
gb|EMT17614.1| DNA-directed RNA polymerase I subunit RPA2 [Aegil...    88   1e-15
gb|ADB85253.1| putative retrotransposon protein [Phyllostachys e...    88   1e-15
ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group] g...    88   1e-15
emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]    87   2e-15
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...    87   2e-15
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]    87   3e-15
emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera]    86   5e-15
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]      86   7e-15
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]    84   2e-14
gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]      83   3e-14
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]    81   2e-13
ref|XP_004135791.1| PREDICTED: uncharacterized protein LOC101211...    79   9e-13
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]    69   5e-10
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]    66   6e-09
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    65   1e-08

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  127 bits (320), Expect(2) = 3e-31
 Identities = 59/77 (76%), Positives = 67/77 (87%)
 Frame = -1

Query: 248 YLWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFD 69
           YLWHSRLGHV +SRL+FL S G+LGNL+  DI  CSGCKL KFSALPF+RST VSS+PFD
Sbjct: 479 YLWHSRLGHVSSSRLRFLASTGALGNLKTCDISDCSGCKLAKFSALPFNRSTSVSSSPFD 538

Query: 68  LIHSDVWGPLPIATKGG 18
           LIHSDVWGP P++TKGG
Sbjct: 539 LIHSDVWGPSPVSTKGG 555



 Score = 33.1 bits (74), Expect(2) = 3e-31
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -2

Query: 391 QDSHS*KLIETGRRGGDLHTLKKLNVP-DAATSGIDSSSFRL 269
           QD  S KLI TGRR   L+ L +L VP   A + +D S FRL
Sbjct: 430 QDLQSQKLIGTGRRENGLYILDELKVPVVVAATTVDLSFFRL 471


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/76 (68%), Positives = 59/76 (77%)
 Frame = -1

Query: 248 YLWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFD 69
           Y WHSRLGH+ A  LK+L+SKG LGN Q HDI YCSGCKL KFSAL F++S     APFD
Sbjct: 379 YSWHSRLGHISAPHLKYLISKGFLGNFQTHDISYCSGCKLAKFSALLFNQSVSPFVAPFD 438

Query: 68  LIHSDVWGPLPIATKG 21
           LIHS+VWGP  +ATKG
Sbjct: 439 LIHSNVWGPSXVATKG 454


>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
          Length = 732

 Score =  105 bits (261), Expect = 9e-21
 Identities = 49/71 (69%), Positives = 55/71 (77%)
 Frame = -1

Query: 230 LGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDLIHSDV 51
           LGHV ASRLK+L S G+LG LQ  DI  C GCKL KFSALPF +S  +S APFDL+HSDV
Sbjct: 1   LGHVSASRLKYLASTGALGKLQTSDISDCCGCKLAKFSALPFSKSVSLSYAPFDLVHSDV 60

Query: 50  WGPLPIATKGG 18
           WGP P+ TKGG
Sbjct: 61  WGPSPVPTKGG 71


>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
          Length = 1287

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 43/76 (56%), Positives = 58/76 (76%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDL 66
           LWHSRLGH  +SR++ LVS+G LG++   DIFYC+ C++ K  ALPF+ S  +S + F+L
Sbjct: 449 LWHSRLGHASSSRVQQLVSRGLLGSVSK-DIFYCTSCQIGKQPALPFNNSESISHSIFEL 507

Query: 65  IHSDVWGPLPIATKGG 18
           IHSDVWGP P+A+ GG
Sbjct: 508 IHSDVWGPSPVASIGG 523


>emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]
          Length = 1013

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 43/76 (56%), Positives = 57/76 (75%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDL 66
           LWHSRLGH  +SR++ LVS+G LG +   DIFYC+ C+L K   LPF+ S  +S++ F+L
Sbjct: 173 LWHSRLGHASSSRVQQLVSRGLLGFVSK-DIFYCTSCQLGKQPTLPFNNSESISNSIFEL 231

Query: 65  IHSDVWGPLPIATKGG 18
           IHSDVWGP P+A+ GG
Sbjct: 232 IHSDVWGPSPVASIGG 247


>gb|EMT17614.1| DNA-directed RNA polymerase I subunit RPA2 [Aegilops tauschii]
          Length = 1856

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/75 (52%), Positives = 50/75 (66%)
 Frame = -1

Query: 242  WHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDLI 63
            WH RLGH+  SRL  LV +G LG++      +C+GC+L K + LP+  S  VS  PFDL+
Sbjct: 1283 WHHRLGHICGSRLSSLVRQGILGSVSGDVSLHCNGCRLGKQTQLPYPTSESVSQRPFDLV 1342

Query: 62   HSDVWGPLPIATKGG 18
            HSDVWGP P  +KGG
Sbjct: 1343 HSDVWGPAPFDSKGG 1357


>gb|ADB85253.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 861

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/75 (53%), Positives = 49/75 (65%)
 Frame = -1

Query: 242 WHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDLI 63
           WH RLGH+  S L  LV +G LG +      +C GCKL K+  LP+  S  +SS PFDL+
Sbjct: 392 WHHRLGHLCGSCLSSLVRQGVLGRVPVDTSMFCQGCKLGKWLQLPYHSSESLSSRPFDLV 451

Query: 62  HSDVWGPLPIATKGG 18
           HSDVWGP PI +KGG
Sbjct: 452 HSDVWGPAPIISKGG 466


>ref|NP_001174869.1| Os06g0583500 [Oryza sativa Japonica Group]
           gi|255677175|dbj|BAH93597.1| Os06g0583500, partial
           [Oryza sativa Japonica Group]
          Length = 174

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/75 (53%), Positives = 50/75 (66%)
 Frame = -1

Query: 242 WHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDLI 63
           WH RLGH+  SRL  L+ +G LG++     F C+GCKL K   LP+  S   +S PFDL+
Sbjct: 70  WHHRLGHLCGSRLSTLIRQGVLGHVSIDTTFDCTGCKLGKQIQLPYPISNSRTSCPFDLV 129

Query: 62  HSDVWGPLPIATKGG 18
           HSDVWGP P A+KGG
Sbjct: 130 HSDVWGPAPFASKGG 144


>emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]
          Length = 1261

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDL 66
           LWHSRLGH  +SR++ LVS+G LG++   D F C+ C+L K  ALPF+ S  +S + F+L
Sbjct: 392 LWHSRLGHAPSSRVQQLVSRGLLGSVSK-DNFDCTSCQLGKQPALPFNNSESISKSIFEL 450

Query: 65  IHSDVWGPLPIATKGG 18
           IHSDVWGP P+A+ GG
Sbjct: 451 IHSDVWGPFPVASIGG 466


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group] gi|78708691|gb|ABB47666.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/77 (51%), Positives = 50/77 (64%)
 Frame = -1

Query: 242 WHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDLI 63
           WH RLGH+  SRL  L+++G LG++     F C GCKL K   LP+  ST  SS PFDL+
Sbjct: 325 WHHRLGHLCGSRLATLINQGVLGSVPVDTTFVCKGCKLGKQVQLPYPSSTSRSSRPFDLV 384

Query: 62  HSDVWGPLPIATKGGRD 12
           HSDVWG  P  +KGG +
Sbjct: 385 HSDVWGKSPFPSKGGHN 401


>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
          Length = 1271

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 42/76 (55%), Positives = 56/76 (73%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDL 66
           LWHSRLGH  +SR++ LVS+G LG++   D F C+ C+L K  ALPF+ S  +S + F+L
Sbjct: 474 LWHSRLGHAPSSRVQQLVSRGLLGSVSK-DNFDCTSCQLGKQPALPFNNSDSISKSIFEL 532

Query: 65  IHSDVWGPLPIATKGG 18
           IHSDVWGP P+A+ GG
Sbjct: 533 IHSDVWGPSPVASIGG 548


>emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera]
          Length = 1293

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 42/76 (55%), Positives = 57/76 (75%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDL 66
           LWHSRLGH  +S+++ LVS+G LG++   D F C+ C+L K  ALPF+ S  +S++ F+L
Sbjct: 284 LWHSRLGHTPSSQVQQLVSRGLLGSVSK-DNFDCTSCQLGKQPALPFNNSESISNSIFEL 342

Query: 65  IHSDVWGPLPIATKGG 18
           IHSDVWGP PIA+ GG
Sbjct: 343 IHSDVWGPSPIASIGG 358


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 40/75 (53%), Positives = 48/75 (64%)
 Frame = -1

Query: 242 WHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDLI 63
           WH RLGH+  SRL  LV +G LGN+     F C GCKL K   LP+  S   S++PF L+
Sbjct: 638 WHHRLGHLCGSRLSTLVQQGVLGNVSIETDFVCKGCKLGKQVQLPYRSSMSRSTSPFALV 697

Query: 62  HSDVWGPLPIATKGG 18
           HSDVWGP P  +KGG
Sbjct: 698 HSDVWGPAPFHSKGG 712


>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
          Length = 1381

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKGSLGNLQ-------PHDIFYCSGCKLTKFSALPFDRSTYV 87
           LWHSRLGH  +SR++ LVS+G LG++          D F C+ C+L K  ALPF+ S  +
Sbjct: 474 LWHSRLGHAPSSRVQQLVSRGLLGSVSRGLLGSVSKDNFDCTSCQLGKQPALPFNNSDSI 533

Query: 86  SSAPFDLIHSDVWGPLPIATKGG 18
           S + F+LIHSDVWGP P+A+ GG
Sbjct: 534 SKSIFELIHSDVWGPSPVASIGG 556


>gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1204

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -1

Query: 242 WHSRLGHVFASRLKFLVSKGSLGNLQPH-DIFYCSGCKLTKFSALPFDRSTYVSSAPFDL 66
           WH RLGH+  SRL  LV +G LG++     +  C GCKL K   LP+  S  VS  PFDL
Sbjct: 497 WHHRLGHLCGSRLSALVRRGLLGSVSGAVSLNQCQGCKLGKQIQLPYHSSESVSKRPFDL 556

Query: 65  IHSDVWGPLPIATKGG 18
           +HSDVWGP P  +KGG
Sbjct: 557 VHSDVWGPAPFVSKGG 572


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 40/75 (53%), Positives = 53/75 (70%)
 Frame = -1

Query: 245  LWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDL 66
            L HSRLGH  +SR++ LVS+G LG+    DIF C+ C L K  ALPF+    +S++ F+L
Sbjct: 1600 LXHSRLGHXSSSRVQQLVSRGLLGSXSK-DIFXCTSCXLXKQPALPFNNXESISNSIFEL 1658

Query: 65   IHSDVWGPLPIATKG 21
            IHSDVWGP P+A+ G
Sbjct: 1659 IHSDVWGPSPVASIG 1673


>ref|XP_004135791.1| PREDICTED: uncharacterized protein LOC101211570 [Cucumis sativus]
           gi|449442445|ref|XP_004138992.1| PREDICTED:
           uncharacterized protein LOC101222551 [Cucumis sativus]
           gi|449446153|ref|XP_004140836.1| PREDICTED:
           uncharacterized protein LOC101212068 [Cucumis sativus]
           gi|449448868|ref|XP_004142187.1| PREDICTED:
           uncharacterized protein LOC101221851 [Cucumis sativus]
           gi|449448870|ref|XP_004142188.1| PREDICTED:
           uncharacterized protein LOC101222325 [Cucumis sativus]
           gi|449460832|ref|XP_004148148.1| PREDICTED:
           uncharacterized protein LOC101214339 [Cucumis sativus]
           gi|449461011|ref|XP_004148237.1| PREDICTED:
           uncharacterized protein LOC101217769 [Cucumis sativus]
           gi|449463533|ref|XP_004149488.1| PREDICTED:
           uncharacterized protein LOC101217687 [Cucumis sativus]
           gi|449468630|ref|XP_004152024.1| PREDICTED:
           uncharacterized protein LOC101209650 [Cucumis sativus]
          Length = 529

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 37/77 (48%), Positives = 45/77 (58%)
 Frame = -1

Query: 248 YLWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFD 69
           Y WH RLGH  + +L+ L+S  +L NL     F C  CKL K  AL F +S      PFD
Sbjct: 444 YQWHLRLGHASSEKLRHLISVNNLTNLTKFVPFNCLNCKLAKQPALSFSQSISNCDKPFD 503

Query: 68  LIHSDVWGPLPIATKGG 18
           L+HSD+WGP PI T  G
Sbjct: 504 LVHSDIWGPAPITTVHG 520


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKG--SLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPF 72
           LWH+RLGHV  S + FL  KG  SL +L P     CS C+L K   LP+ R+ + SS   
Sbjct: 429 LWHARLGHVNYSVISFLNKKGHLSLTSLLPSPSL-CSTCQLAKNHRLPYSRNEHRSSHVL 487

Query: 71  DLIHSDVWGPLPIATKGG 18
           DLIH D+WGP PI +  G
Sbjct: 488 DLIHCDLWGPSPIKSNSG 505


>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
          Length = 1211

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSA-PFD 69
           LWH RLGH+    +K L+SKG L  L+  D   C  C L K   + F ++   S A   +
Sbjct: 353 LWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTSKAEKLE 412

Query: 68  LIHSDVWGPLPIATKGG 18
           L+H+D+WGP P+A+ GG
Sbjct: 413 LVHTDLWGPSPVASLGG 429


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/76 (38%), Positives = 43/76 (56%)
 Frame = -1

Query: 245 LWHSRLGHVFASRLKFLVSKGSLGNLQPHDIFYCSGCKLTKFSALPFDRSTYVSSAPFDL 66
           LWH RLGH  A+ +K ++SK ++ ++   D  +CS C L K    PF  S    + P +L
Sbjct: 523 LWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLEL 582

Query: 65  IHSDVWGPLPIATKGG 18
           IH D+WGP  + +  G
Sbjct: 583 IHLDLWGPTLVLSNSG 598