BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00057896
         (252 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006470136.1| PREDICTED: uncharacterized protein LOC102610...    63   5e-08
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...    60   3e-07
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]          59   7e-07
ref|XP_006478657.1| PREDICTED: uncharacterized protein LOC102627...    59   9e-07
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          59   9e-07

>ref|XP_006470136.1| PREDICTED: uncharacterized protein LOC102610034 [Citrus sinensis]
          Length = 477

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/73 (38%), Positives = 46/73 (63%)
 Frame = -2

Query: 239 SSRGQAILAFANQNDVPTIIQIPKQISQPDLHKLMPTTWFTDYQKFQQAQQPVTTTTCPL 60
           ++  +A++  A   ++PTIIQIP QI Q +L KLMP  W ++Y++F Q  +P+ T+    
Sbjct: 316 TANSEALMILAEFKEIPTIIQIPSQIPQQELIKLMPLEWLSNYEQFHQNSEPIQTSESH- 374

Query: 59  LQTQFDGTVKITY 21
            Q   DGT+ +T+
Sbjct: 375 FQKNSDGTIHLTF 387


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
           gi|565672276|gb|AHC13194.1| polyprotein [Citrus
           endogenous pararetrovirus]
          Length = 1812

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/77 (36%), Positives = 46/77 (59%)
 Frame = -2

Query: 251 LKTSSSRGQAILAFANQNDVPTIIQIPKQISQPDLHKLMPTTWFTDYQKFQQAQQPVTTT 72
           L T       ++  A  + +PTIIQIP+QI + +L KLMP  W ++Y++F     PV T+
Sbjct: 232 LPTPEHHSDTLMVLAESDQIPTIIQIPRQIPRHELLKLMPLEWISNYEQFHNNTAPVQTS 291

Query: 71  TCPLLQTQFDGTVKITY 21
              + + + DGTV++T+
Sbjct: 292 E-SMFERRPDGTVRMTF 307


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/77 (35%), Positives = 46/77 (59%)
 Frame = -2

Query: 251 LKTSSSRGQAILAFANQNDVPTIIQIPKQISQPDLHKLMPTTWFTDYQKFQQAQQPVTTT 72
           L T       ++  A  + +PTIIQIP+QI + +L KLMP  W ++Y++F     P+ T+
Sbjct: 232 LPTPEHHSDTLMVLAEFDQIPTIIQIPRQIPRHELIKLMPLEWISNYEQFHNNTAPIQTS 291

Query: 71  TCPLLQTQFDGTVKITY 21
              + + + DGTV++T+
Sbjct: 292 E-SMFERRQDGTVRMTF 307


>ref|XP_006478657.1| PREDICTED: uncharacterized protein LOC102627366 [Citrus sinensis]
          Length = 345

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/77 (33%), Positives = 46/77 (59%)
 Frame = -2

Query: 251 LKTSSSRGQAILAFANQNDVPTIIQIPKQISQPDLHKLMPTTWFTDYQKFQQAQQPVTTT 72
           L T  +   A++   +   +P+++QIP++I +    KLMP  W ++Y+ F Q  QPV T+
Sbjct: 245 LPTPQTSTDALMILVDSETIPSMVQIPRKIQKQKFLKLMPLEWLSNYETFHQNSQPVQTS 304

Query: 71  TCPLLQTQFDGTVKITY 21
              L + + DGTV++T+
Sbjct: 305 NA-LFEKRADGTVRMTF 320


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/77 (35%), Positives = 46/77 (59%)
 Frame = -2

Query: 251 LKTSSSRGQAILAFANQNDVPTIIQIPKQISQPDLHKLMPTTWFTDYQKFQQAQQPVTTT 72
           L T       ++  A  + +PTIIQIP+QI + +L +LMP  W ++Y++F     PV T+
Sbjct: 232 LPTPEHHSDTLMVLAESDQIPTIIQIPRQIPRHELLQLMPLEWISNYEQFHNNTAPVQTS 291

Query: 71  TCPLLQTQFDGTVKITY 21
              + + + DGTV++T+
Sbjct: 292 E-SMFERRPDGTVRMTF 307