BLASTX nr result
ID: Cocculus23_contig00057231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00057231
(349 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prun... 76 4e-12
ref|XP_002324235.2| pentatricopeptide repeat-containing family p... 72 1e-10
ref|XP_007147062.1| hypothetical protein PHAVU_006G093100g [Phas... 69 7e-10
emb|CBI38215.3| unnamed protein product [Vitis vinifera] 69 7e-10
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi... 69 7e-10
ref|XP_006421782.1| hypothetical protein CICLE_v10004643mg [Citr... 68 1e-09
ref|XP_006443657.1| hypothetical protein CICLE_v10019256mg [Citr... 68 1e-09
ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phas... 67 2e-09
ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat... 67 2e-09
ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
emb|CBI28334.3| unnamed protein product [Vitis vinifera] 67 2e-09
emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera] 67 2e-09
ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat... 67 3e-09
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,... 67 3e-09
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis] 67 3e-09
ref|XP_007208504.1| hypothetical protein PRUPE_ppa026555mg [Prun... 67 3e-09
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_002306741.1| pentatricopeptide repeat-containing family p... 67 3e-09
gb|EXC20880.1| hypothetical protein L484_012956 [Morus notabilis] 66 4e-09
gb|EXB38456.1| hypothetical protein L484_022357 [Morus notabilis] 66 4e-09
>ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
gi|462399488|gb|EMJ05156.1| hypothetical protein
PRUPE_ppa022872mg [Prunus persica]
Length = 714
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/74 (51%), Positives = 49/74 (66%)
Frame = +3
Query: 108 LRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIRN 287
L L CKSM+ LK++HA +IKT TH +KL+ FCA++ F DL YAL VF I N
Sbjct: 37 LTLLSKCKSMQNLKQVHAHIIKTGLHNTHFALSKLVEFCAIS-PFGDLSYALLVFQSIEN 95
Query: 288 PSLHLYNLIIRGFS 329
P+ ++N IIRGFS
Sbjct: 96 PNQIIWNTIIRGFS 109
>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317719|gb|EEF02800.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 736
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/99 (42%), Positives = 63/99 (63%)
Frame = +3
Query: 36 RAMSFSSSPIASINELNTHNVLFVLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLI 215
+A+SFS P ++ H L +L +CK+++ LK+IH+ +IKT TH +KLI
Sbjct: 12 QALSFSD-PSPPYKLVHDHPSLTLL---SNCKTLQTLKQIHSQIIKTGLHNTHFALSKLI 67
Query: 216 SFCALNRNFSDLDYALSVFTQIRNPSLHLYNLIIRGFSS 332
FCA++ + DL YALS+F IRNP+ ++N +IRG SS
Sbjct: 68 EFCAVSPH-GDLSYALSLFKTIRNPNHVIWNHMIRGLSS 105
>ref|XP_007147062.1| hypothetical protein PHAVU_006G093100g [Phaseolus vulgaris]
gi|561020285|gb|ESW19056.1| hypothetical protein
PHAVU_006G093100g [Phaseolus vulgaris]
Length = 561
Score = 68.9 bits (167), Expect = 7e-10
Identities = 35/85 (41%), Positives = 59/85 (69%)
Frame = +3
Query: 81 LNTHNVLFVLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYA 260
+N ++++ +L K CKSM ELK++HA +I T +++ + +KLI FC ++ F D++YA
Sbjct: 2 INQNSIISLLAK---CKSMSELKKLHALIITTPTIKSIVPLSKLIDFC-VDSEFGDINYA 57
Query: 261 LSVFTQIRNPSLHLYNLIIRGFSSG 335
VF QI PS++++N +IRGF +G
Sbjct: 58 GLVFRQIDTPSVYIWNSMIRGFVNG 82
>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 68.9 bits (167), Expect = 7e-10
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +3
Query: 39 AMSFSSSPIASI--NELNTHNVLFVLRKLESCKSMKELKEIHASVIKTRALQTH--LVWT 206
A+S SSS +AS ++ N H + F L L++CKS+K LK+IHAS+IKT + T
Sbjct: 17 ALSSSSSSLASTLPHDFNPHKLSF-LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTIST 75
Query: 207 KLISFCALNRNFSDLDYALSVFTQIRNPSLHLYNLIIRGFSS 332
+L + CA + D YALS+ Q+R P+L LYN IIRG ++
Sbjct: 76 RLSALCAQSLPI-DPRYALSLLAQLRTPNLPLYNAIIRGLAT 116
>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 68.9 bits (167), Expect = 7e-10
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +3
Query: 39 AMSFSSSPIASI--NELNTHNVLFVLRKLESCKSMKELKEIHASVIKTRALQTH--LVWT 206
A+S SSS +AS ++ N H + F L L++CKS+K LK+IHAS+IKT + T
Sbjct: 2 ALSSSSSSLASTLPHDFNPHKLSF-LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTIST 60
Query: 207 KLISFCALNRNFSDLDYALSVFTQIRNPSLHLYNLIIRGFSS 332
+L + CA + D YALS+ Q+R P+L LYN IIRG ++
Sbjct: 61 RLSALCAQSLPI-DPRYALSLLAQLRTPNLPLYNAIIRGLAT 101
>ref|XP_006421782.1| hypothetical protein CICLE_v10004643mg [Citrus clementina]
gi|568874334|ref|XP_006490271.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
gi|557523655|gb|ESR35022.1| hypothetical protein
CICLE_v10004643mg [Citrus clementina]
Length = 569
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Frame = +3
Query: 45 SFSSSPIASINELNTHNVLFVLRK-LESCKSMKELKEIHASVIKTRALQT---HLVWTKL 212
S +SP A ++ N + +LR ++ CK+M+ELKEIH +IK+ LQT H + T+L
Sbjct: 11 SLLNSP-AKVSPPNKESTKLILRNAIDECKNMRELKEIHTQIIKSPCLQTNDHHSLITRL 69
Query: 213 ISFCALNRNFSDLDYALSVFTQIRNPSLHLYNLIIR 320
+ FCAL+ + S L YA +VF+ I+ L+ YN++IR
Sbjct: 70 LFFCALSVSGS-LSYATNVFSHIKRSDLYTYNIMIR 104
>ref|XP_006443657.1| hypothetical protein CICLE_v10019256mg [Citrus clementina]
gi|568853066|ref|XP_006480188.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g48910-like [Citrus sinensis]
gi|557545919|gb|ESR56897.1| hypothetical protein
CICLE_v10019256mg [Citrus clementina]
Length = 642
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +3
Query: 114 KLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIRNPS 293
++ CKSM+EL ++HA IKT ++ L +++ FCA++ + DL+YA VFTQIR P+
Sbjct: 24 EITKCKSMRELTQVHAHFIKTGQIRDPLAAAEILRFCAVS-DLGDLEYAHKVFTQIREPN 82
Query: 294 LHLYNLIIRGFS 329
YN IIR FS
Sbjct: 83 CFSYNTIIRAFS 94
>ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
gi|561014990|gb|ESW13851.1| hypothetical protein
PHAVU_008G231600g [Phaseolus vulgaris]
Length = 525
Score = 67.4 bits (163), Expect = 2e-09
Identities = 39/97 (40%), Positives = 62/97 (63%)
Frame = +3
Query: 39 AMSFSSSPIASINELNTHNVLFVLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLIS 218
A+ SSSP + N ++ H L +L+ C +MK+L++IH +IKT H+ +++++
Sbjct: 7 ALPPSSSPSIA-NFISDHPCLTMLQN--QCTNMKDLQKIHPHIIKTGLALDHIAASRVLT 63
Query: 219 FCALNRNFSDLDYALSVFTQIRNPSLHLYNLIIRGFS 329
FCA + D++YA VFT I NP+L+ +N IIRGFS
Sbjct: 64 FCASSSG--DINYAYLVFTGIPNPNLYCWNTIIRGFS 98
>ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/81 (39%), Positives = 54/81 (66%)
Frame = +3
Query: 93 NVLFVLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVF 272
N V+ LE CK+MKELK+IH+ +I T ++ + ++LI FCA N D++YA +VF
Sbjct: 4 NYYTVMSFLEKCKTMKELKQIHSLMITTSVVKNIIPCSRLIDFCA-NSELGDIEYARTVF 62
Query: 273 TQIRNPSLHLYNLIIRGFSSG 335
QI +++++N +I+G+ +G
Sbjct: 63 DQINQRTVYIWNSMIKGYCNG 83
>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +3
Query: 105 VLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIR 284
V+ L+ CKS+ EL++IHA +IKT L ++LI+FC+L+ LDYA SVF++I+
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 285 NPSLHLYNLIIRGFS 329
+P+ ++ +I+GFS
Sbjct: 69 HPNSFIFFALIKGFS 83
>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +3
Query: 105 VLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIR 284
V+ L+ CKS+ EL++IHA +IKT L ++LI+FC+L+ LDYA SVF++I+
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 285 NPSLHLYNLIIRGFS 329
+P+ ++ +I+GFS
Sbjct: 69 HPNSFIFFALIKGFS 83
>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +3
Query: 105 VLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIR 284
V+ L+ CKS+ EL++IHA +IKT L ++LI+FC+L+ LDYA SVF++I+
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 285 NPSLHLYNLIIRGFS 329
+P+ ++ +I+GFS
Sbjct: 69 HPNSFIFFALIKGFS 83
>ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/74 (41%), Positives = 51/74 (68%)
Frame = +3
Query: 105 VLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIR 284
+L L CKSM+ELK++H ++ T +++ + +KLI FC ++ F D++YA V QI
Sbjct: 7 ILSLLAKCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFC-VDSEFGDINYADLVLRQIH 65
Query: 285 NPSLHLYNLIIRGF 326
NPS++++N +IRGF
Sbjct: 66 NPSVYIWNSMIRGF 79
>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 413
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/82 (35%), Positives = 54/82 (65%)
Frame = +3
Query: 93 NVLFVLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVF 272
N ++ ++ C SM +LK+IHA +I T + H ++L+SFCAL+ N D++YA+ +F
Sbjct: 48 NTSIIMDMVDKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALS-NSRDINYAIKLF 106
Query: 273 TQIRNPSLHLYNLIIRGFSSGT 338
I++P++ ++N IIR ++ +
Sbjct: 107 KSIQDPNIFMWNTIIRALANSS 128
>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
Length = 739
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/78 (43%), Positives = 52/78 (66%)
Frame = +3
Query: 105 VLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIR 284
+L +E C S+KELK+IHA +++T +KLI+ CA++ +FS LDYA VF QI
Sbjct: 34 LLSLIEQCTSLKELKQIHAQMLRTGLFFDPFSASKLITVCAMS-SFSSLDYAHQVFDQIP 92
Query: 285 NPSLHLYNLIIRGFSSGT 338
P+L+ +N IIR ++S +
Sbjct: 93 KPNLYTWNTIIRAYASSS 110
>ref|XP_007208504.1| hypothetical protein PRUPE_ppa026555mg [Prunus persica]
gi|462404146|gb|EMJ09703.1| hypothetical protein
PRUPE_ppa026555mg [Prunus persica]
Length = 565
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +3
Query: 105 VLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIR 284
+L LE+CKSM ELK++H +I T + ++L+ FCA N DL YA SVF QI
Sbjct: 8 ILSLLETCKSMSELKQLHGLMITTSVFNNVIPLSRLVDFCA-NSEARDLVYAKSVFHQIN 66
Query: 285 NPSLHLYNLIIRGFSS 332
P ++++N +IRG+S+
Sbjct: 67 QPRVYIWNSMIRGYSN 82
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/97 (40%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +3
Query: 51 SSSPIASINE-LNTHNVLFVLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCA 227
S SP SI++ ++ H L +L K C +MK+L++IHA ++KT + L + +++FCA
Sbjct: 10 SPSPSTSISKFISDHPHLSILEK--HCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCA 67
Query: 228 LNRNFSDLDYALSVFTQIRNPSLHLYNLIIRGFSSGT 338
+ D++YA VFTQI +P+L +N IIRGFS +
Sbjct: 68 TSPG-GDINYAYLVFTQIHSPNLFSWNTIIRGFSQSS 103
>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856190|gb|EEE93737.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 509
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +3
Query: 120 ESCKSMKELKEIHASVIKTRALQTHLVWTKLISFCALNRNFSDLDYALSVFTQIRNPSLH 299
++C SMK+L++IHA +IKT + + +++++FC D++YA VFTQIRNP+L
Sbjct: 4 KNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAG--DINYAYLVFTQIRNPNLF 61
Query: 300 LYNLIIRGFSSGT 338
++N IIRGFS +
Sbjct: 62 VWNTIIRGFSQSS 74
>gb|EXC20880.1| hypothetical protein L484_012956 [Morus notabilis]
Length = 540
Score = 66.2 bits (160), Expect = 4e-09
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Frame = +3
Query: 84 NTHNVLFVLRKLESCKSMKELKEIHASVIKTRAL-QTH--LVWTKLISFCALNRNFSDLD 254
N N L LR +E CK+M+ELK+IH +IK+ ++ Q+H L+ ++L+ FCA++ N L
Sbjct: 11 NLRNAL--LRLIEECKNMRELKQIHTQIIKSTSITQSHQLLLLSRLLFFCAIS-NLGSLS 67
Query: 255 YALSVFTQIRNPSLHLYNLIIRGFSSGTIS 344
YA +F I+ P+ ++YN++IR ++S S
Sbjct: 68 YANDIFRAIKIPNPYVYNIMIRAYASKNYS 97
>gb|EXB38456.1| hypothetical protein L484_022357 [Morus notabilis]
Length = 651
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/98 (38%), Positives = 57/98 (58%)
Frame = +3
Query: 45 SFSSSPIASINELNTHNVLFVLRKLESCKSMKELKEIHASVIKTRALQTHLVWTKLISFC 224
SFSSS + + + T LE CK++ EL++IHA +IKT + +KL+SFC
Sbjct: 4 SFSSSSLMLVTQAVTI--------LEKCKTISELRQIHAQMIKTNLVSNTFAASKLVSFC 55
Query: 225 ALNRNFSDLDYALSVFTQIRNPSLHLYNLIIRGFSSGT 338
L DLD+ALSVF +I+NP+ +Y +I F+ +
Sbjct: 56 CLT---GDLDHALSVFHRIQNPNPFIYFTLINCFTESS 90