BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00057150
         (532 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18
ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]    94   2e-17
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily p...    85   1e-14
gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]      76   4e-12
ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, part...    74   2e-11
ref|XP_002303975.2| pentatricopeptide repeat-containing family p...    73   5e-11
ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citr...    72   8e-11
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,...    70   3e-10
ref|XP_006361475.1| PREDICTED: putative pentatricopeptide repeat...    68   1e-09
gb|EXC24885.1| hypothetical protein L484_013254 [Morus notabilis]      68   2e-09
ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09
gb|EXB54324.1| hypothetical protein L484_006484 [Morus notabilis]      65   1e-08
ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
gb|EXB54618.1| hypothetical protein L484_019190 [Morus notabilis]      64   2e-08
ref|XP_006344590.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citr...    63   5e-08
ref|XP_006847904.1| hypothetical protein AMTR_s00029p00110030 [A...    63   5e-08
ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [A...    63   5e-08

>ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like isoform X1 [Citrus sinensis]
           gi|568871598|ref|XP_006488969.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like isoform X2 [Citrus sinensis]
          Length = 564

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
 Frame = +3

Query: 249 ILKQKLHIFVDPTDFVSLLSQC--ANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILG 422
           I+ ++L       D V+LLSQC  A+ KH+   HG+M+ RGLD+ N+LLS+FI++CS LG
Sbjct: 22  IIHKRLICCTSAADLVTLLSQCKCADIKHLFAAHGFMIVRGLDQNNHLLSRFIDSCSSLG 81

Query: 423 FINYGYSVFARKIDPDIFLYNTMIKGFSQTSSAEDA 530
           F +Y YS+F  K  PD++LYNT IK   QT +  +A
Sbjct: 82  FSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 117


>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/79 (54%), Positives = 57/79 (72%)
 Frame = +3

Query: 294 VSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDI 473
           +SLL QC+N KH++Q H +M+ RGLD+ N LLS+FIE CS LGF +Y +S+F  K  PDI
Sbjct: 45  LSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDI 104

Query: 474 FLYNTMIKGFSQTSSAEDA 530
           +LYNT+IK  S    A +A
Sbjct: 105 YLYNTIIKALSNPELATEA 123


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/79 (54%), Positives = 57/79 (72%)
 Frame = +3

Query: 294 VSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDI 473
           +SLL QC+N KH++Q H +M+ RGLD+ N LLS+FIE CS LGF +Y +S+F  K  PDI
Sbjct: 45  LSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDI 104

Query: 474 FLYNTMIKGFSQTSSAEDA 530
           +LYNT+IK  S    A +A
Sbjct: 105 YLYNTIIKALSNPELATEA 123


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
           gi|449493602|ref|XP_004159370.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 548

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/87 (48%), Positives = 57/87 (65%)
 Frame = +3

Query: 270 IFVDPTDFVSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVF 449
           IF     F SLLS C +  H+ QIHG+M+ R LD+ N  LS+FI+ C+ LG  +Y +S+F
Sbjct: 20  IFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIF 79

Query: 450 ARKIDPDIFLYNTMIKGFSQTSSAEDA 530
           + K  PD+ LYNT IK  S+TSS  +A
Sbjct: 80  SNKTHPDLRLYNTAIKALSKTSSPINA 106


>ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590582550|ref|XP_007014655.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508785017|gb|EOY32273.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508785018|gb|EOY32274.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 540

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 40/77 (51%), Positives = 52/77 (67%)
 Frame = +3

Query: 300 LLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDIFL 479
           LL +C+N KH+ Q HG+MV   LD    LLS+FIE CS LGF  Y YSVFA  + P I++
Sbjct: 9   LLKRCSNLKHVEQAHGFMVRTALDHDEILLSQFIEACSSLGFPGYAYSVFAFNLQPRIYV 68

Query: 480 YNTMIKGFSQTSSAEDA 530
           +NTMIK  + + SA +A
Sbjct: 69  FNTMIKALTLSHSAFEA 85


>gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]
          Length = 524

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = +3

Query: 285 TDFVSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFA-RKI 461
           +D VSLL QC++FKHI Q HG ++PRGL   N +L+ FI++CS LG+ +Y Y VF     
Sbjct: 4   SDVVSLLKQCSSFKHIRQTHGVLIPRGLRNDNLILAHFIQSCSSLGYSSYAYLVFTHHNK 63

Query: 462 DPDIFLYNTMIKGFSQTSS 518
             +I+L+NTMI   S + +
Sbjct: 64  RHNIYLFNTMINVVSPSEA 82


>ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, partial [Prunus persica]
           gi|462403882|gb|EMJ09439.1| hypothetical protein
           PRUPE_ppa016950mg, partial [Prunus persica]
          Length = 532

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +3

Query: 303 LSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKI-DPDIFL 479
           L QC+N KHI Q HG+MV  GL + N  L + I+ CS LGF +Y YSVF R    P I+L
Sbjct: 3   LRQCSNLKHIEQAHGFMVAGGLHQDNRTLPRLIQACSSLGFSDYAYSVFTRTHGQPSIYL 62

Query: 480 YNTMIKGFSQTSSAEDA 530
           YNT+IK  + + S   A
Sbjct: 63  YNTIIKAKALSPSPSHA 79


>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550343649|gb|EEE78954.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 543

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
 Frame = +3

Query: 294 VSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKID-PD 470
           +SL++  ++ KHI+Q H +M+ R LD  N LLS+FI  CS LGF +Y YS+F      PD
Sbjct: 17  ISLIAHSSHLKHIHQTHAFMLLRALDTDNLLLSRFIHACSSLGFYSYAYSLFTSITHAPD 76

Query: 471 IFLYNTMIKGFSQT 512
           I+LYN +IK  S +
Sbjct: 77  IYLYNNIIKALSSS 90


>ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citrus clementina]
           gi|557548156|gb|ESR58785.1| hypothetical protein
           CICLE_v10014960mg [Citrus clementina]
          Length = 510

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 32/60 (53%), Positives = 44/60 (73%)
 Frame = +3

Query: 351 MVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDIFLYNTMIKGFSQTSSAEDA 530
           M+ RGLD+ N+LLS+FI++CS LGF +Y YS+F  K  PD++LYNT IK   QT +  +A
Sbjct: 1   MIVRGLDQNNHLLSRFIDSCSSLGFSDYAYSIFTHKSKPDVYLYNTTIKALCQTDNPLNA 60


>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +3

Query: 300 LLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKI-DPDIF 476
           LL+ C+N KH++Q H +M+ R LD  N LLS FI++ S LGF  Y YS+F      P+IF
Sbjct: 17  LLNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTHPPNIF 76

Query: 477 LYNTMIKGFS 506
           LYNT+I+  S
Sbjct: 77  LYNTIIRALS 86


>ref|XP_006361475.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Solanum tuberosum]
          Length = 563

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/89 (32%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
 Frame = +3

Query: 270 IFVDPTDF--VSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGF-INYGY 440
           I  +P+ F  ++LL +    KH+ Q+H +++ +G ++ ++++++FI  C++  + I+Y  
Sbjct: 8   IRTEPSSFTVLNLLRESRGIKHLEQVHTHIIQKGYEQDHFIINQFISLCNVFSYDISYAT 67

Query: 441 SVFARKIDPDIFLYNTMIKGFSQTSSAED 527
           SVF   I P+++++NT+IKG+S+ SS  D
Sbjct: 68  SVFEHVIQPNVYVWNTLIKGYSKKSSLVD 96


>gb|EXC24885.1| hypothetical protein L484_013254 [Morus notabilis]
          Length = 615

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +3

Query: 285 TDFVSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYS--VFARK 458
           +DF  LL+ C +FK I Q+H  ++ RGLD+C YLL+K + T S LG     YS  VF R 
Sbjct: 6   SDFNFLLNGCTSFKQIKQVHAQLLHRGLDQCCYLLAKLVRTLSKLGVPMDAYSRPVFERV 65

Query: 459 IDPDIFLYNTMIKGFS 506
             P+ FL+  MI+G+S
Sbjct: 66  TSPNPFLWTAMIRGYS 81


>ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Glycine max]
          Length = 580

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = +3

Query: 300 LLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDIFL 479
           LL  C N  H+ Q  G+M+ RGLD+ + LL++FI T + LG  +Y YSVF     P IF 
Sbjct: 67  LLCHCTNLSHLQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNHRPSIFF 126

Query: 480 YNTMIKGFSQTS 515
           YN +I   S ++
Sbjct: 127 YNNVIWALSSSN 138


>gb|EXB54324.1| hypothetical protein L484_006484 [Morus notabilis]
          Length = 523

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 48/74 (64%)
 Frame = +3

Query: 294 VSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDI 473
           +SL   C+  K + QIH  ++  G D+  ++L+K +E CS+ G ++Y  SVF R  + D 
Sbjct: 59  MSLFKFCSTMKDLKQIHARIIQLGFDQDLFVLAKMVEFCSVQGDMDYSVSVFDRIENSDG 118

Query: 474 FLYNTMIKGFSQTS 515
           FL+NTMI+GF +T+
Sbjct: 119 FLWNTMIRGFGKTN 132


>ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Fragaria vesca subsp. vesca]
          Length = 518

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = +3

Query: 300 LLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDIFL 479
           L+  C + KHI Q HG MV  GL+      ++FIE CS LGF +Y  SVF R   P+I L
Sbjct: 7   LVRGCYSLKHIQQAHGLMVTLGLEE-----ARFIEACSSLGFSSYACSVFTRNPQPNINL 61

Query: 480 YNTMIK 497
           YNTMIK
Sbjct: 62  YNTMIK 67


>gb|EXB54618.1| hypothetical protein L484_019190 [Morus notabilis]
          Length = 553

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 28/73 (38%), Positives = 47/73 (64%)
 Frame = +3

Query: 297 SLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDIF 476
           SL+  C N KH+ Q+H  ++ +GL++ ++L+S+FI     L  ++Y  SVF R + P  F
Sbjct: 18  SLIKACRNPKHLQQVHAQIIRKGLEQDHFLISQFICLSQTLSNLSYSVSVFDRILSPSTF 77

Query: 477 LYNTMIKGFSQTS 515
           L+N +IKG+ + S
Sbjct: 78  LWNVLIKGYCEKS 90


>ref|XP_006344590.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like isoform X1 [Solanum tuberosum]
           gi|565355429|ref|XP_006344591.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like isoform X2 [Solanum tuberosum]
          Length = 508

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 27/53 (50%), Positives = 39/53 (73%)
 Frame = +3

Query: 351 MVPRGLDRCNYLLSKFIETCSILGFINYGYSVFARKIDPDIFLYNTMIKGFSQ 509
           MV R LD  N++LS+F  TCS +GF++Y YS+F    +P+I+LYNT+I  FS+
Sbjct: 1   MVHRALDEDNFILSQFFHTCSAVGFVSYAYSIFTSNPNPNIYLYNTLISIFSR 53


>ref|XP_006430120.1| hypothetical protein CICLE_v10011370mg [Citrus clementina]
           gi|557532177|gb|ESR43360.1| hypothetical protein
           CICLE_v10011370mg [Citrus clementina]
          Length = 574

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/75 (36%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = +3

Query: 294 VSLLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILGF-INYGYSVFARKIDPD 470
           ++L+ +C    H++Q+H +++ +GLD+ + L++ FI  C  L   ++Y  +VF R ++P+
Sbjct: 41  LTLIKKCKLQTHLHQVHSHIIKKGLDQDHSLVAHFISLCHSLATPLSYSSAVFNRIVNPN 100

Query: 471 IFLYNTMIKGFSQTS 515
            FL+NT++KG+SQ S
Sbjct: 101 TFLWNTLLKGYSQNS 115


>ref|XP_006847904.1| hypothetical protein AMTR_s00029p00110030 [Amborella trichopoda]
           gi|548851209|gb|ERN09485.1| hypothetical protein
           AMTR_s00029p00110030 [Amborella trichopoda]
          Length = 305

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = +3

Query: 300 LLSQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCSILG--FINYGYSVFARKIDPDI 473
           L+ +C   K ++QIH  M+  GL  CN+ +SK I  C++     + Y  S+F +  +P  
Sbjct: 12  LIKRCTTIKQVHQIHSLMITTGLSHCNFAMSKIIHFCAVSDPKNLEYALSLFNQVTNPTN 71

Query: 474 FLYNTMIKGFSQTSSAEDA 530
           F++NTMI+GFS + + + A
Sbjct: 72  FIWNTMIRGFSISQNPQKA 90


>ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [Amborella trichopoda]
           gi|548843491|gb|ERN03145.1| hypothetical protein
           AMTR_s00003p00103190 [Amborella trichopoda]
          Length = 297

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
 Frame = +3

Query: 237 PVCTILKQKLHIFVDPTDFVSLL-SQCANFKHINQIHGYMVPRGLDRCNYLLSKFIETCS 413
           P  +  KQ L        F++LL S+C +  H+ QIH  +   GL + N+L++  ++ C+
Sbjct: 76  PSTSPTKQALISTPTAHQFITLLESKCTSMNHLKQIHAQITRHGLSQNNFLMASLVKFCA 135

Query: 414 --ILGFINYGYSVFARKIDPDIFLYNTMIKGFSQTSSAEDA 530
               G +NY  +VF +  DP  F++NTMI+G S+ ++ E+A
Sbjct: 136 EPTSGNLNYARAVFNQLKDPHPFIWNTMIRGCSENNALEEA 176