BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00055467
         (259 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341456.1| PREDICTED: pentatricopeptide repeat-containi...   112   7e-23
dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]                          105   7e-21
ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   102   6e-20
ref|XP_007209168.1| hypothetical protein PRUPE_ppa006155mg [Prun...    99   8e-19
ref|XP_004309554.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
ref|XP_002511070.1| pentatricopeptide repeat-containing protein,...    97   3e-18
gb|EXC35167.1| hypothetical protein L484_022720 [Morus notabilis]      94   2e-17
ref|XP_006485061.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_006586321.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_002318186.2| hypothetical protein POPTR_0012s11260g [Popu...    91   2e-16
gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indi...    87   2e-15
ref|XP_006394472.1| hypothetical protein EUTSA_v10004369mg [Eutr...    87   2e-15
ref|NP_200988.1| pentatricopeptide repeat-containing protein [Ar...    87   3e-15
ref|XP_007201172.1| hypothetical protein PRUPE_ppa003481mg [Prun...    86   5e-15
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...    86   5e-15
ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group] g...    86   5e-15
gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japo...    86   5e-15
gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sat...    86   5e-15
ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arab...    86   7e-15

>ref|XP_006341456.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Solanum tuberosum]
          Length = 531

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/86 (62%), Positives = 68/86 (79%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           LGR+LHSQAL FGF  D+FV N L+  Y+ S S+ +AR+VFDE  +RDVVSYN ++ G +
Sbjct: 137 LGRTLHSQALKFGFLVDVFVCNNLVRVYTVSGSISDARRVFDESCDRDVVSYNLIIDGYV 196

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           KAGEIG AR+V D MP++DAVSWGTL
Sbjct: 197 KAGEIGEAREVFDEMPVRDAVSWGTL 222


>dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]
          Length = 248

 Score =  105 bits (262), Expect = 7e-21
 Identities = 49/86 (56%), Positives = 65/86 (75%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L  SLHSQA  FGF  D++V N+LI+ YS SD L +A QVFDE   +DVVSYNA++ G +
Sbjct: 138 LANSLHSQAFKFGFMSDLYVVNSLIHVYSVSDRLCDAYQVFDESPRKDVVSYNAVIDGFV 197

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           K G++  ARK+ DRMP++D+VSWGT+
Sbjct: 198 KVGDVEKARKLFDRMPVRDSVSWGTI 223


>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61800 [Vitis vinifera]
          Length = 576

 Score =  102 bits (254), Expect = 6e-20
 Identities = 51/86 (59%), Positives = 65/86 (75%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L ++LHSQA  FGFG D+FV NTLI+ YS +  L +A QVF+E   +DVVSYNAL+ G I
Sbjct: 147 LAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNALIGGFI 206

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           K G+   AR++ D+MPI+DAVSWGTL
Sbjct: 207 KVGDTDRARRLFDKMPIRDAVSWGTL 232


>ref|XP_007209168.1| hypothetical protein PRUPE_ppa006155mg [Prunus persica]
           gi|462404903|gb|EMJ10367.1| hypothetical protein
           PRUPE_ppa006155mg [Prunus persica]
          Length = 425

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 46/86 (53%), Positives = 63/86 (73%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           + ++LHSQAL FGF   +FV NTLI+ YS    L +A +VFDE   RDVVSYNA+L   +
Sbjct: 30  ISQALHSQALKFGFASHLFVSNTLIHVYSICHHLNHACKVFDESSRRDVVSYNAMLDAFV 89

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           KAGE+  AR++ + MP++D+VSWGT+
Sbjct: 90  KAGEVSRARQLFEEMPVRDSVSWGTV 115


>ref|XP_004309554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Fragaria vesca subsp. vesca]
          Length = 527

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 46/86 (53%), Positives = 62/86 (72%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           + ++LHSQAL FGF    FV NTLI+ YS   +L +ARQ+FDE   +D+VSYNA+L   +
Sbjct: 132 ISQALHSQALKFGFASHSFVANTLIHVYSVCHNLNHARQLFDESPHKDMVSYNAMLDAFV 191

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           K GE+  AR+V D MP +D+VSWGT+
Sbjct: 192 KGGEMDNAREVFDEMPERDSVSWGTV 217


>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 551

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L + LHSQ   FGF  D++V N+LI+ YS  D L  A QVFDE  +RDVVSYNAL+ G +
Sbjct: 155 LAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNALVDGFV 214

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           KAGE   AR++ D MP++D+VSWG+L
Sbjct: 215 KAGEFVKAREIFDLMPMRDSVSWGSL 240


>gb|EXC35167.1| hypothetical protein L484_022720 [Morus notabilis]
          Length = 642

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/85 (50%), Positives = 63/85 (74%)
 Frame = +1

Query: 4   GRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLIK 183
           G   HS+ + FGFG D+FV+N+LI+ YS   S+ +AR+VFDE+ E D+VS+N+++HG +K
Sbjct: 178 GGKAHSKVVRFGFGSDLFVRNSLIHMYSVCGSVGDARKVFDEMPELDLVSWNSMIHGYVK 237

Query: 184 AGEIGGARKVLDRMPIKDAVSWGTL 258
            GE+  ARK+ + MP +DA SW TL
Sbjct: 238 NGEVDVARKLFEVMPKRDAFSWNTL 262


>ref|XP_006485061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Citrus sinensis]
          Length = 523

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/86 (51%), Positives = 62/86 (72%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L +++HSQ L  GF  D+FV N+L++ Y     L +A+++FDEI  RDVVS N L+ G +
Sbjct: 129 LAQTIHSQVLKLGFICDVFVLNSLMHVYCVFHRLRDAQELFDEILYRDVVSCNTLIDGYV 188

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           KAG++  AR++ DRMP +DAVSWGTL
Sbjct: 189 KAGDLAHARQLFDRMPFRDAVSWGTL 214


>ref|XP_006586321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Glycine max]
          Length = 496

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 44/86 (51%), Positives = 59/86 (68%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L +SLHSQAL FG   D+F  NTLI  YS    + +A ++F E    DVVSYNAL+HGL+
Sbjct: 127 LAQSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHGLV 186

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           K  +I  AR++ D MP++D +SWGT+
Sbjct: 187 KTRQISRARELFDEMPVRDEISWGTM 212


>ref|XP_002318186.2| hypothetical protein POPTR_0012s11260g [Populus trichocarpa]
           gi|550326865|gb|EEE96406.2| hypothetical protein
           POPTR_0012s11260g [Populus trichocarpa]
          Length = 536

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 43/86 (50%), Positives = 60/86 (69%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L R LH Q L FGF  D++V N+LI+ Y   D   +A +VFDE  +RDVVSYN L+ G +
Sbjct: 141 LARCLHCQVLKFGFLSDLYVMNSLIHGYMVCDMSNDAYKVFDESPQRDVVSYNVLIDGFV 200

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           KAG++  AR++ D MP++D+VSW T+
Sbjct: 201 KAGDVVKARELFDLMPVRDSVSWNTI 226


>gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
          Length = 914

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/84 (47%), Positives = 57/84 (67%)
 Frame = +1

Query: 7   RSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLIKA 186
           R++HS  +  G  +D FV N LI+ YS +    +AR+VFDE+ ERDVVS+N  +  +++ 
Sbjct: 467 RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVRE 526

Query: 187 GEIGGARKVLDRMPIKDAVSWGTL 258
           GE+ GARK+ D MP KD VSW T+
Sbjct: 527 GELAGARKLFDEMPEKDTVSWNTI 550


>ref|XP_006394472.1| hypothetical protein EUTSA_v10004369mg [Eutrema salsugineum]
           gi|557091111|gb|ESQ31758.1| hypothetical protein
           EUTSA_v10004369mg [Eutrema salsugineum]
          Length = 393

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L ++LH QAL FG   D+F  NTLI  YS    + +A Q+FDE  +RDVV+YN L+ GL+
Sbjct: 29  LVKTLHCQALRFGLVSDLFTLNTLIRVYSLITPIESALQLFDENPQRDVVTYNVLIDGLV 88

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           KA EI  AR++ D MP +D VSW +L
Sbjct: 89  KAREIVRARELFDSMPFRDLVSWNSL 114


>ref|NP_200988.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171532|sp|Q9FLS9.1|PP441_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g61800 gi|10176873|dbj|BAB10080.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332010136|gb|AED97519.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 499

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/86 (51%), Positives = 59/86 (68%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L ++LH QAL FG   D+F  NTLI  YS    + +A Q+FDE  +RDVV+YN L+ GL+
Sbjct: 135 LVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLV 194

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           KA EI  AR++ D MP++D VSW +L
Sbjct: 195 KAREIVRARELFDSMPLRDLVSWNSL 220


>ref|XP_007201172.1| hypothetical protein PRUPE_ppa003481mg [Prunus persica]
           gi|462396572|gb|EMJ02371.1| hypothetical protein
           PRUPE_ppa003481mg [Prunus persica]
          Length = 571

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 40/82 (48%), Positives = 58/82 (70%)
 Frame = +1

Query: 4   GRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLIK 183
           G+ +H+QA  FGF  D FVQ +LI+ YS+  +L+ ARQVFDEI E D+ S+N++++   K
Sbjct: 82  GKQIHAQAFLFGFTHDPFVQTSLIHMYSSCGNLMLARQVFDEIYEPDLPSWNSIMNAYSK 141

Query: 184 AGEIGGARKVLDRMPIKDAVSW 249
            G IG AR V D+MP ++ +SW
Sbjct: 142 VGLIGNARDVFDKMPHRNVISW 163


>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 40/81 (49%), Positives = 55/81 (67%)
 Frame = +1

Query: 16  HSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLIKAGEI 195
           H++ + FGFG D+F +N+LI  YS    + NAR VFDE    D+VSYN+++ G +K GEI
Sbjct: 130 HARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNSMIDGYVKNGEI 189

Query: 196 GGARKVLDRMPIKDAVSWGTL 258
           G ARKV + MP +D +SW  L
Sbjct: 190 GAARKVFNEMPDRDVLSWNCL 210


>ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
           gi|255670427|dbj|BAH95753.1| Os12g0577900, partial
           [Oryza sativa Japonica Group]
          Length = 614

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = +1

Query: 7   RSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLIKA 186
           R++HS  +  G  +D FV N LI+ YS +    +AR+VFDE+ ERDVVS+N  +  +++ 
Sbjct: 148 RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVRE 207

Query: 187 GEIGGARKVLDRMPIKDAVSWGTL 258
           GE+ G RK+ D MP KD VSW T+
Sbjct: 208 GELAGVRKLFDEMPEKDTVSWNTI 231


>gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
          Length = 921

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = +1

Query: 7   RSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLIKA 186
           R++HS  +  G  +D FV N LI+ YS +    +AR+VFDE+ ERDVVS+N  +  +++ 
Sbjct: 455 RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVRE 514

Query: 187 GEIGGARKVLDRMPIKDAVSWGTL 258
           GE+ G RK+ D MP KD VSW T+
Sbjct: 515 GELAGVRKLFDEMPEKDTVSWNTI 538


>gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 491

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = +1

Query: 7   RSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLIKA 186
           R++HS  +  G  +D FV N LI+ YS +    +AR+VFDE+ ERDVVS+N  +  +++ 
Sbjct: 25  RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVRE 84

Query: 187 GEIGGARKVLDRMPIKDAVSWGTL 258
           GE+ G RK+ D MP KD VSW T+
Sbjct: 85  GELAGVRKLFDEMPEKDTVSWNTI 108


>ref|XP_004309259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Fragaria vesca subsp. vesca]
          Length = 511

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 39/85 (45%), Positives = 60/85 (70%)
 Frame = +1

Query: 4   GRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLIK 183
           GRS+H Q + +GF  D+FVQN+L+N YS   SL+ AR+VFDEI ERDVVS+N+++ G ++
Sbjct: 135 GRSVHGQVVKYGFRKDLFVQNSLMNMYSVFGSLICARKVFDEITERDVVSWNSMIKGYLR 194

Query: 184 AGEIGGARKVLDRMPIKDAVSWGTL 258
           +G++  A +V   M  +   SW ++
Sbjct: 195 SGDLDEAIEVFREMKKRSVFSWNSI 219


>ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
           lyrata] gi|297312290|gb|EFH42714.1| hypothetical protein
           ARALYDRAFT_496347 [Arabidopsis lyrata subsp. lyrata]
          Length = 1401

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = +1

Query: 1   LGRSLHSQALTFGFGDDIFVQNTLINFYSNSDSLVNARQVFDEIRERDVVSYNALLHGLI 180
           L ++LH QAL FG   D+F  NTLI  YS    + +A Q+FDE  +RDVV+YN L+ GL+
Sbjct: 549 LVKTLHCQALRFGLLSDLFTLNTLIRAYSLMAPIGSALQLFDENPQRDVVTYNVLIDGLV 608

Query: 181 KAGEIGGARKVLDRMPIKDAVSWGTL 258
           KA EI  AR++ D MP +D VSW +L
Sbjct: 609 KACEIVRARELFDSMPFRDLVSWNSL 634