BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00055116
         (271 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604017.1| Pentatricopeptide repeat-containing protein ...   130   2e-28
ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_007041991.1| Pentatricopeptide repeat-containing protein ...   123   2e-26
ref|XP_006582458.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_007143556.1| hypothetical protein PHAVU_007G081500g [Phas...   121   9e-26
ref|XP_006487291.1| PREDICTED: pentatricopeptide repeat-containi...   119   6e-25
ref|XP_006365930.1| PREDICTED: putative pentatricopeptide repeat...   116   3e-24
ref|XP_004248875.1| PREDICTED: putative pentatricopeptide repeat...   115   5e-24
ref|XP_004292440.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
gb|EYU40410.1| hypothetical protein MIMGU_mgv1a021803mg [Mimulus...   104   1e-20
ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   101   9e-20
ref|XP_004500755.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
gb|EPS66401.1| hypothetical protein M569_08375, partial [Genlise...    91   2e-16
emb|CBI37965.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_006423535.1| hypothetical protein CICLE_v10030191mg [Citr...    72   6e-11
ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [S...    64   3e-08
ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea ma...    63   4e-08
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ...    62   1e-07
ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat...    61   2e-07

>ref|XP_003604017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493065|gb|AES74268.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 742

 Score =  130 bits (326), Expect = 2e-28
 Identities = 63/91 (69%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   KTLTN-LFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTA 178
           +TLTN  FK +N +NPLHFN I+SHF R G P LAL TFSFMH N VPLD YA CS+LTA
Sbjct: 247 QTLTNSFFKCMNSTNPLHFNVIISHFCRKGFPFLALTTFSFMHTNHVPLDTYALCSTLTA 306

Query: 179 AASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           ++  K VNFGKQ+H HVEK GW SSVFVGSA
Sbjct: 307 SSKFKDVNFGKQIHAHVEKSGWSSSVFVGSA 337


>ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 472

 Score =  124 bits (312), Expect = 1e-26
 Identities = 57/90 (63%), Positives = 70/90 (77%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           ++L N FK +N +NPLHFN I+S F R GLP LAL +FSF+H NGVPLD YA CS+LTA+
Sbjct: 59  QSLNNFFKCMNSTNPLHFNAIISDFCRKGLPFLALASFSFVHANGVPLDTYALCSTLTAS 118

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           + +K +N GKQ+H HV K GW SSVFVGSA
Sbjct: 119 SKVKDLNLGKQIHAHVAKSGWSSSVFVGSA 148


>ref|XP_007041991.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
           gi|508705926|gb|EOX97822.1| Pentatricopeptide
           repeat-containing protein [Theobroma cacao]
          Length = 470

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/90 (63%), Positives = 69/90 (76%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           K LTN FKSINP NP+ FN I+S FS++G    AL TFSFMHFNG+ LD YA C SLTA+
Sbjct: 60  KILTNCFKSINPKNPVPFNVIISDFSKNGFAFFALKTFSFMHFNGISLDTYALCGSLTAS 119

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           +S++S  FG+Q+H H+ K GWLSSVFV SA
Sbjct: 120 SSLRSAEFGRQIHAHLAKSGWLSSVFVVSA 149


>ref|XP_006582458.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 458

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/90 (62%), Positives = 68/90 (75%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           ++L N FK +N +NPLHFN  +S F R G P LAL +FSFMH NGVPLD YA CS+LTA+
Sbjct: 59  QSLNNFFKCMNSTNPLHFNATISDFCRKGFPFLALSSFSFMHTNGVPLDTYALCSTLTAS 118

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           + +K +N GKQ+H  VEK GW SSVFVGSA
Sbjct: 119 SKVKDLNLGKQIHAQVEKSGWSSSVFVGSA 148


>ref|XP_007143556.1| hypothetical protein PHAVU_007G081500g [Phaseolus vulgaris]
           gi|561016746|gb|ESW15550.1| hypothetical protein
           PHAVU_007G081500g [Phaseolus vulgaris]
          Length = 470

 Score =  121 bits (304), Expect = 9e-26
 Identities = 57/88 (64%), Positives = 67/88 (76%)
 Frame = +2

Query: 8   LTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAAAS 187
           L N FK +N +NPLHFN I+S F R G P LAL +FSFMH NGVPLD YA CS+LTA++ 
Sbjct: 61  LKNFFKCMNSTNPLHFNAIISDFCRKGFPFLALASFSFMHTNGVPLDTYALCSTLTASSK 120

Query: 188 IKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           +K +NFGKQ+HT   K GW SSVFVGSA
Sbjct: 121 VKDLNFGKQIHTQGVKSGWSSSVFVGSA 148


>ref|XP_006487291.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Citrus sinensis]
          Length = 424

 Score =  119 bits (297), Expect = 6e-25
 Identities = 56/90 (62%), Positives = 66/90 (73%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           +TLTN  K +NP NPL FN ++S F R+G P  AL TFSFMH +G+ LD YA CSSLTA+
Sbjct: 14  RTLTNCLKFLNPRNPLPFNVVISDFCRNGSPLYALKTFSFMHVHGIFLDTYALCSSLTAS 73

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
            S+K   FGKQ+  HV K GWLSSVFVGSA
Sbjct: 74  TSVKDARFGKQVQAHVTKSGWLSSVFVGSA 103


>ref|XP_006365930.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum tuberosum]
          Length = 481

 Score =  116 bits (291), Expect = 3e-24
 Identities = 52/90 (57%), Positives = 69/90 (76%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           +TLTN FK + P NPL  N+I+SHFS++G  SLAL TFSFMHF G+ +D+Y  CSS+TA+
Sbjct: 72  QTLTNFFKFLKPRNPLLLNSILSHFSQNGFHSLALRTFSFMHFGGIDIDSYTLCSSITAS 131

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           +++K V FG+ +HT V K GW SSV+VG A
Sbjct: 132 SAVKDVKFGQMIHTLVRKSGWFSSVYVGCA 161


>ref|XP_004248875.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Solanum lycopersicum]
          Length = 599

 Score =  115 bits (289), Expect = 5e-24
 Identities = 51/90 (56%), Positives = 69/90 (76%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           +  TN FK + P+NPL  N+I+SHFS++G  SLAL TFSFMHF G+ +D+Y  CSS+TA+
Sbjct: 190 QNFTNFFKFLKPTNPLLLNSILSHFSQNGFHSLALRTFSFMHFGGIGIDSYTLCSSITAS 249

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           +++K V FG+ +HT V K GW SSV+VGSA
Sbjct: 250 SAVKDVKFGRMIHTLVRKSGWFSSVYVGSA 279


>ref|XP_004292440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/89 (58%), Positives = 66/89 (74%)
 Frame = +2

Query: 5   TLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAAA 184
           TLTN FK + P++ L FN ++S   R+G   LAL T SFMH +GV +D YA CSSLTAA+
Sbjct: 83  TLTNFFKCMKPNSELPFNVLISDLCRNGFNFLALKTLSFMHCSGVSIDTYALCSSLTAAS 142

Query: 185 SIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           SI+ V+FG+++H HV K GW SSVFVGSA
Sbjct: 143 SIQDVSFGREIHAHVAKSGWCSSVFVGSA 171


>gb|EYU40410.1| hypothetical protein MIMGU_mgv1a021803mg [Mimulus guttatus]
          Length = 480

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/90 (57%), Positives = 65/90 (72%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           K LT  FK  +  NPL FN+I+SHFS+ G    ALHTFSFMH+NGV +D+YA CSSL +A
Sbjct: 70  KILTRFFKCSSLRNPLPFNSIISHFSQRGSGCFALHTFSFMHYNGVYVDSYALCSSLKSA 129

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           + +K+   G  MH +V K GWL+SVFVGSA
Sbjct: 130 SCLKN---GGMMHAYVVKSGWLASVFVGSA 156


>ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 469

 Score =  103 bits (256), Expect = 3e-20
 Identities = 49/90 (54%), Positives = 61/90 (67%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           K+L  +F+ I P   L FN ++S FSRHG    AL  FSFMH NGVP+D YA CSSL   
Sbjct: 62  KSLNGIFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGC 121

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           + +++V +GKQ+H  V K GWL SVFVGSA
Sbjct: 122 SFVQNVVYGKQIHAFVGKSGWLCSVFVGSA 151


>ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g18750, chloroplastic-like [Cucumis sativus]
          Length = 497

 Score =  101 bits (252), Expect = 9e-20
 Identities = 49/90 (54%), Positives = 59/90 (65%)
 Frame = +2

Query: 2   KTLTNLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAA 181
           K+L  +F+ I P   L FN ++S FSRHG    AL  FSFMH NGVP+D YA CSSL   
Sbjct: 90  KSLNGIFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGC 149

Query: 182 ASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           +  + V +GKQ+H  V K GWL SVFVGSA
Sbjct: 150 SLFRXVVYGKQIHAFVGKSGWLCSVFVGSA 179


>ref|XP_004500755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cicer arietinum]
          Length = 458

 Score =  100 bits (248), Expect = 3e-19
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   KTLTN-LFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTA 178
           +TL N  FK +N +NPLHFN I+SHF   G P LAL +FSFMH N +PLD YA CS+LTA
Sbjct: 71  QTLVNTFFKCMNSTNPLHFNLIISHFCHKGFPFLALASFSFMHTNAIPLDTYALCSTLTA 130

Query: 179 AASIKSVNFGKQMHTHVEK 235
           ++ +K  +FGKQ+H HV K
Sbjct: 131 SSKLKDFHFGKQIHAHVGK 149


>gb|EPS66401.1| hypothetical protein M569_08375, partial [Genlisea aurea]
          Length = 374

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 43/73 (58%), Positives = 56/73 (76%)
 Frame = +2

Query: 53  FNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAAASIKSVNFGKQMHTHVE 232
           FN+I+S+FSR+    LALHTFSFMH N V  D+YA CSSL +A+ +++V  G+ +H HV 
Sbjct: 1   FNSILSYFSRYASHRLALHTFSFMHHNTVFSDSYALCSSLNSASVLENVCLGRILHAHVH 60

Query: 233 KLGWLSSVFVGSA 271
           K GWL+SVFVGSA
Sbjct: 61  KSGWLASVFVGSA 73


>emb|CBI37965.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = +2

Query: 122 MHFNGVPLDNYAFCSSLTAAASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           MH NGVPLD Y+FC SL A+ S+K+V FG Q+H  VEK GWLSSVFVGSA
Sbjct: 1   MHTNGVPLDTYSFCCSLVASCSMKNVKFGAQIHARVEKSGWLSSVFVGSA 50


>ref|XP_006423535.1| hypothetical protein CICLE_v10030191mg [Citrus clementina]
           gi|557525469|gb|ESR36775.1| hypothetical protein
           CICLE_v10030191mg [Citrus clementina]
          Length = 371

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = +2

Query: 122 MHFNGVPLDNYAFCSSLTAAASIKSVNFGKQMHTHVEKLGWLSSVFVGSA 271
           MH +G+ LD YA CSSLTA+ S+K   FGKQ+  HV K GWLSSVFVGSA
Sbjct: 1   MHVHGIFLDTYALCSSLTASTSVKDARFGKQVQAHVTKSGWLSSVFVGSA 50


>ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
           gi|241932394|gb|EES05539.1| hypothetical protein
           SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/85 (36%), Positives = 53/85 (62%)
 Frame = +2

Query: 17  LFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAAASIKS 196
           LF+ +   + + + T+V+ F+++GL S AL  F  M F G+ +D Y F S LTA  ++ +
Sbjct: 228 LFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSA 287

Query: 197 VNFGKQMHTHVEKLGWLSSVFVGSA 271
           +  GKQ+H ++ +  +  +VFVGSA
Sbjct: 288 LEQGKQIHAYIIRTRYDDNVFVGSA 312


>ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
           gi|238013832|gb|ACR37951.1| unknown [Zea mays]
           gi|413938826|gb|AFW73377.1| hypothetical protein
           ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/85 (36%), Positives = 54/85 (63%)
 Frame = +2

Query: 17  LFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAAASIKS 196
           LF+ +   + + + T+V+ F+++GL S AL+ F  M F G+ +D Y F S LTA  ++ +
Sbjct: 228 LFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSA 287

Query: 197 VNFGKQMHTHVEKLGWLSSVFVGSA 271
           +  GKQ+H ++ +  +  +VFVGSA
Sbjct: 288 LEQGKQIHAYIIRTHYDDNVFVGSA 312


>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329643|gb|EFH60062.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 697

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/86 (36%), Positives = 52/86 (60%)
 Frame = +2

Query: 14  NLFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAAASIK 193
           +LF+S+   +   +N++VS F++H     AL+ F+ MH  G  L+ Y F S L+A + + 
Sbjct: 107 SLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLN 166

Query: 194 SVNFGKQMHTHVEKLGWLSSVFVGSA 271
            +N G Q+H+ + K   LS V++GSA
Sbjct: 167 DMNRGVQIHSLIAKSPCLSDVYIGSA 192


>ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 52/85 (61%)
 Frame = +2

Query: 17  LFKSINPSNPLHFNTIVSHFSRHGLPSLALHTFSFMHFNGVPLDNYAFCSSLTAAASIKS 196
           LF++I   + + + T+V+  +++GL S AL  F  M   GV +D Y F S LTA  ++ +
Sbjct: 233 LFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 292

Query: 197 VNFGKQMHTHVEKLGWLSSVFVGSA 271
           +  GKQ+H ++ +  +  +VFVGSA
Sbjct: 293 LEEGKQIHAYITRTCYEDNVFVGSA 317