BLASTX nr result

ID: Cocculus23_contig00054356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00054356
         (445 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          62   1e-11
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic...    67   2e-09
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...    67   3e-09
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]      67   3e-09
gb|EMS61456.1| Protein HASTY 1 [Triticum urartu]                       66   6e-09
emb|CCH50976.1| T4.15 [Malus x robusta]                                65   1e-08
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    65   1e-08
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...    49   4e-08
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    61   2e-07
ref|XP_003590997.1| Myosin XI [Medicago truncatula] gi|355480045...    59   5e-07
gb|EMT12744.1| Exostosin-1 [Aegilops tauschii]                         57   3e-06

>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 62.4 bits (150), Expect(2) = 1e-11
 Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMM-RNIGRKKDLH 76
           IKLM HT KLWE + E  +R  T    N+F FM  RS  +AIYL+R MM R    K+DLH
Sbjct: 134 IKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKRDLH 193

Query: 75  MVFINRGK 52
           MVFI+  K
Sbjct: 194 MVFIDLEK 201



 Score = 32.7 bits (73), Expect(2) = 1e-11
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -3

Query: 71  FLSIEGNYDKVPRKIIWWILEK 6
           F+ +E  YD+VPR+++W +LEK
Sbjct: 196 FIDLEKAYDRVPREVLWKVLEK 217


>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
          Length = 974

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMMRNI-GRKKDLH 76
           IKLM HT KLWE + E+ +R  T+  +N+F FM  RSTM+AI+L+R +M+    +KKDLH
Sbjct: 29  IKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMKRYREQKKDLH 88

Query: 75  MVFINRGK 52
           MVFI+  K
Sbjct: 89  MVFIDLEK 96


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMM-RNIGRKKDLH 76
           IKLM HT KLWE + E+ +R  T+  +N+F FM  RSTM+AI+L+R +M R   +KKDLH
Sbjct: 393 IKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMVRYREQKKDLH 452

Query: 75  MVFINRGK 52
           MVFI+  K
Sbjct: 453 MVFIDLEK 460


>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMM-RNIGRKKDLH 76
           IKLM HT KLWE + E+ +R  T+  +N+F FM  RSTM+AI+L+R +M R   +KKDLH
Sbjct: 63  IKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKKDLH 122

Query: 75  MVFINRGK 52
           MVFI+  K
Sbjct: 123 MVFIDLEK 130


>gb|EMS61456.1| Protein HASTY 1 [Triticum urartu]
          Length = 955

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMM-RNIGRKKDLH 76
           IKL  HTTKLWE + E+ +R  T+  +N+F FM  RSTM+AI+L+R +M R   +KKDLH
Sbjct: 706 IKLTSHTTKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKKDLH 765

Query: 75  MVFINRGK 52
           M+FI+  K
Sbjct: 766 MLFIDLEK 773


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMM-RNIGRKKDLH 76
           IKLM HT KLWE + E+ +R  T    N+F FM  RSTM+AIYL+R +M R    KKDLH
Sbjct: 640 IKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLH 699

Query: 75  MVFINRGK 52
           MVFI+  K
Sbjct: 700 MVFIDLEK 707


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMM-RNIGRKKDLH 76
           IKLM HT KLWE + E+ +R  T    N+F FM  RSTM+AIYL+R +M R    KKDLH
Sbjct: 244 IKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLH 303

Query: 75  MVFINRGK 52
           MVFI+  K
Sbjct: 304 MVFIDLEK 311


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
           chalumnae]
          Length = 1500

 Score = 49.3 bits (116), Expect(2) = 4e-08
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMMRNIGRK-KDLH 76
           I LM H  KLWE + E  +R       N+F F   RST+ AI+ ++ +M     K KDLH
Sbjct: 441 IALMSHAMKLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYKEKRKDLH 500

Query: 75  MVFINRGK 52
           MVF++  K
Sbjct: 501 MVFVDLEK 508



 Score = 33.5 bits (75), Expect(2) = 4e-08
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 71  FLSIEGNYDKVPRKIIWWILEKK 3
           F+ +E  YD+VPR +IWW + K+
Sbjct: 503 FVDLEKAYDRVPRGLIWWCMRKR 525


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -2

Query: 252 IKLMGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLI-RTMMRNIGRKKDLH 76
           IKLM HT KLWE + +  +R  T    N+F FM  RSTM+AIYL+ R M R    KKDLH
Sbjct: 222 IKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLH 281

Query: 75  MVFINRGK 52
           +VF +  K
Sbjct: 282 LVFFDLEK 289


>ref|XP_003590997.1| Myosin XI [Medicago truncatula] gi|355480045|gb|AES61248.1| Myosin
           XI [Medicago truncatula]
          Length = 1400

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = -2

Query: 243 MGHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMMRNI-GRKKDLHMVF 67
           + HT KLWE + E  VR  T    N+F FM  RSTM+ IYL+R MM      KKD+H+VF
Sbjct: 509 LSHTKKLWERVIERRVRKNTRVTYNQFRFMPGRSTMEVIYLLRRMMEQYWTNKKDIHLVF 568

Query: 66  INRGK 52
           I+  K
Sbjct: 569 IDLEK 573


>gb|EMT12744.1| Exostosin-1 [Aegilops tauschii]
          Length = 549

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -2

Query: 240 GHTTKLWEILTEN*VRAGTAPLRNKFEFMFRRSTMKAIYLIRTMMRNIGRKKDLHMVFIN 61
           GHT KLWE + E+ +R+ T+  +N+F F+  RS M+ I+LIR ++     KK LHMVFI+
Sbjct: 417 GHTMKLWERVIEHRLRSMTSMTKNQFGFVPGRSIMEVIFLIRQLVERYMEKKALHMVFID 476

Query: 60  RGK 52
             K
Sbjct: 477 LEK 479


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