BLASTX nr result
ID: Cocculus23_contig00053340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00053340
(233 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007035313.1| Tetratricopeptide repeat-like superfamily pr... 114 2e-23
emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera] 112 7e-23
ref|XP_007224676.1| hypothetical protein PRUPE_ppa025910mg, part... 110 3e-22
emb|CBI23741.3| unnamed protein product [Vitis vinifera] 108 8e-22
ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi... 108 8e-22
ref|XP_004297946.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_003590730.1| Pentatricopeptide repeat-containing protein ... 106 4e-21
gb|EXB58833.1| hypothetical protein L484_002770 [Morus notabilis] 105 5e-21
ref|XP_004495254.1| PREDICTED: putative pentatricopeptide repeat... 104 1e-20
ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_002459776.1| hypothetical protein SORBIDRAFT_02g010240 [S... 103 2e-20
ref|XP_002314516.1| hypothetical protein POPTR_0010s07440g [Popu... 103 2e-20
gb|EPS67055.1| hypothetical protein M569_07722, partial [Genlise... 103 3e-20
ref|XP_004956075.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_007144146.1| hypothetical protein PHAVU_007G132600g [Phas... 103 3e-20
tpg|DAA60415.1| TPA: hypothetical protein ZEAMMB73_385428 [Zea m... 102 4e-20
ref|XP_006340958.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_004247938.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_006420400.1| hypothetical protein CICLE_v10004542mg [Citr... 99 5e-19
ref|XP_006480219.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
>ref|XP_007035313.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508714342|gb|EOY06239.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 638
Score = 114 bits (284), Expect = 2e-23
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = +3
Query: 3 AYGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGIL 182
AYGLHG G++A+ LFD+ML LG+KPD ITVVG+LSAC RSG V +G++IYKS D+G+
Sbjct: 419 AYGLHGKGEEAMCLFDQMLLLGVKPDMITVVGVLSACRRSGLVNKGLSIYKSITNDYGMK 478
Query: 183 PTPEICACMVDMLGRSG 233
PT EICAC+VDMLGRSG
Sbjct: 479 PTVEICACVVDMLGRSG 495
>emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 112 bits (279), Expect = 7e-23
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G +AI L+D+MLQ GI+PD IT VGILSAC RSG V EG+NIY S + D+GI P
Sbjct: 412 YGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEP 471
Query: 186 TPEICACMVDMLGRSG 233
T EICAC+VDMLGR+G
Sbjct: 472 TLEICACIVDMLGRAG 487
>ref|XP_007224676.1| hypothetical protein PRUPE_ppa025910mg, partial [Prunus persica]
gi|462421612|gb|EMJ25875.1| hypothetical protein
PRUPE_ppa025910mg, partial [Prunus persica]
Length = 536
Score = 110 bits (274), Expect = 3e-22
Identities = 52/76 (68%), Positives = 62/76 (81%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G++AI L+ +ML LGIKPD IT+VGILSAC RSG V +G++IY S DFGI P
Sbjct: 338 YGLHGIGEEAIVLYSKMLHLGIKPDTITIVGILSACGRSGLVNKGLSIYSSLSTDFGIKP 397
Query: 186 TPEICACMVDMLGRSG 233
T EICAC+VD+LGRSG
Sbjct: 398 TVEICACVVDLLGRSG 413
>emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 108 bits (270), Expect = 8e-22
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G +AI L+D+MLQ GI+PD IT VGILSAC RSG V EG+NIY S + D+GI P
Sbjct: 334 YGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEP 393
Query: 186 TPEICACMVDMLGRSG 233
T EI AC+VDMLGR+G
Sbjct: 394 TLEIFACIVDMLGRAG 409
>ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 108 bits (270), Expect = 8e-22
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G +AI L+D+MLQ GI+PD IT VGILSAC RSG V EG+NIY S + D+GI P
Sbjct: 412 YGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEP 471
Query: 186 TPEICACMVDMLGRSG 233
T EI AC+VDMLGR+G
Sbjct: 472 TLEIFACIVDMLGRAG 487
>ref|XP_004297946.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 107 bits (267), Expect = 2e-21
Identities = 47/76 (61%), Positives = 63/76 (82%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G++AI L+++M++LGIKPD IT+VG+LSAC RSG V EG+++Y S D+GI P
Sbjct: 416 YGLHGRGEEAIVLYNKMVRLGIKPDMITIVGVLSACSRSGLVNEGLSVYSSATTDYGIKP 475
Query: 186 TPEICACMVDMLGRSG 233
E+CAC+VD+LGRSG
Sbjct: 476 RVEMCACVVDLLGRSG 491
>ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 627
Score = 106 bits (264), Expect = 4e-21
Identities = 49/77 (63%), Positives = 61/77 (79%)
Frame = +3
Query: 3 AYGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGIL 182
AYGLHG G +A++ + EMLQ GIKPD ITVVG+LSACCRSG V EGI+IY S ++ +
Sbjct: 415 AYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMK 474
Query: 183 PTPEICACMVDMLGRSG 233
P+ EIC C+VD+LGRSG
Sbjct: 475 PSVEICGCVVDLLGRSG 491
>gb|EXB58833.1| hypothetical protein L484_002770 [Morus notabilis]
Length = 617
Score = 105 bits (263), Expect = 5e-21
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G++A+SL+DEM+ GI+PD IT+VG+LSAC RSG V EG+NIY S + +GI P
Sbjct: 411 YGLHGRGNEAVSLYDEMVLEGIQPDAITIVGVLSACGRSGLVDEGLNIYSSVINKYGIKP 470
Query: 186 TPEICACMVDMLGRSG 233
T EICAC+VDMLG+ G
Sbjct: 471 TVEICACVVDMLGQLG 486
>ref|XP_004495254.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cicer arietinum]
Length = 629
Score = 104 bits (260), Expect = 1e-20
Identities = 49/77 (63%), Positives = 62/77 (80%)
Frame = +3
Query: 3 AYGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGIL 182
AYGLHG G++A++ + +MLQ GIKPD ITVVG+LS+C +SG V EGI+IYKS + +
Sbjct: 417 AYGLHGKGEEAVTTYYKMLQQGIKPDMITVVGVLSSCSKSGLVDEGISIYKSLTTKYEMK 476
Query: 183 PTPEICACMVDMLGRSG 233
PT EICAC+VDMLGRSG
Sbjct: 477 PTVEICACVVDMLGRSG 493
>ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 104 bits (260), Expect = 1e-20
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +3
Query: 3 AYGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGIL 182
AYGLHG G++AI + +MLQ G KPD ITVVG+LSAC +SG V EGI+IYKS + + I
Sbjct: 418 AYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIK 477
Query: 183 PTPEICACMVDMLGRSG 233
PT EICAC+VDMLGRSG
Sbjct: 478 PTVEICACVVDMLGRSG 494
>ref|XP_002459776.1| hypothetical protein SORBIDRAFT_02g010240 [Sorghum bicolor]
gi|241923153|gb|EER96297.1| hypothetical protein
SORBIDRAFT_02g010240 [Sorghum bicolor]
Length = 506
Score = 103 bits (258), Expect = 2e-20
Identities = 46/76 (60%), Positives = 61/76 (80%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YG+HG G +A++LFD+ML G+KPD+I +G+LSACCRSG V +G++ Y S V D G+ P
Sbjct: 336 YGIHGMGVEAVALFDQMLSSGVKPDSIIGLGVLSACCRSGLVLKGLDTYSSMVNDHGVHP 395
Query: 186 TPEICACMVDMLGRSG 233
T E+CACMVD+LGRSG
Sbjct: 396 TEEMCACMVDLLGRSG 411
>ref|XP_002314516.1| hypothetical protein POPTR_0010s07440g [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| hypothetical protein
POPTR_0010s07440g [Populus trichocarpa]
Length = 632
Score = 103 bits (258), Expect = 2e-20
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G++A+ ++++MLQLG KPD IT+VG+LSAC R+G V EG+ IYKS + + I P
Sbjct: 416 YGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDEGLCIYKSAINKYRIKP 475
Query: 186 TPEICACMVDMLGRSG 233
T EICAC+VDMLGRSG
Sbjct: 476 TVEICACVVDMLGRSG 491
>gb|EPS67055.1| hypothetical protein M569_07722, partial [Genlisea aurea]
Length = 461
Score = 103 bits (257), Expect = 3e-20
Identities = 47/77 (61%), Positives = 57/77 (74%)
Frame = +3
Query: 3 AYGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGIL 182
AYGLHG G ++++LFD ML+ G KPD V G+LSACCRSG V +G+ IY S V +GI
Sbjct: 277 AYGLHGRGRESVTLFDSMLENGFKPDETVVTGVLSACCRSGLVNDGLRIYDSVVKAYGIE 336
Query: 183 PTPEICACMVDMLGRSG 233
PT EIC C+VDML RSG
Sbjct: 337 PTAEICGCVVDMLARSG 353
>ref|XP_004956075.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Setaria italica]
Length = 515
Score = 103 bits (257), Expect = 3e-20
Identities = 45/76 (59%), Positives = 61/76 (80%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YG+HG G +A+ LF++ML G+KPD+I +G+LSACCR+G V +G+NIY S V D G+ P
Sbjct: 345 YGIHGMGVEAVDLFNQMLASGVKPDSIVGLGVLSACCRAGLVLKGLNIYNSIVKDHGVQP 404
Query: 186 TPEICACMVDMLGRSG 233
T E+CAC+VD+LGRSG
Sbjct: 405 TEEMCACIVDLLGRSG 420
>ref|XP_007144146.1| hypothetical protein PHAVU_007G132600g [Phaseolus vulgaris]
gi|561017336|gb|ESW16140.1| hypothetical protein
PHAVU_007G132600g [Phaseolus vulgaris]
Length = 599
Score = 103 bits (256), Expect = 3e-20
Identities = 49/77 (63%), Positives = 60/77 (77%)
Frame = +3
Query: 3 AYGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGIL 182
AYGLHG G++A+ + +MLQ G KPD ITVVG+LSAC +SG V EGI+IYKS + + I
Sbjct: 418 AYGLHGRGEEAVITYHKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIK 477
Query: 183 PTPEICACMVDMLGRSG 233
P EICAC+VDMLGRSG
Sbjct: 478 PAVEICACVVDMLGRSG 494
>tpg|DAA60415.1| TPA: hypothetical protein ZEAMMB73_385428 [Zea mays]
Length = 504
Score = 102 bits (255), Expect = 4e-20
Identities = 45/76 (59%), Positives = 60/76 (78%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YG+HG G +A++LFD+ML G+KPD+I +G+LSACC +G V +G+N Y S V D G+ P
Sbjct: 334 YGIHGMGVEAVALFDQMLSSGVKPDSIIGLGVLSACCHAGLVLKGLNTYSSMVNDHGVHP 393
Query: 186 TPEICACMVDMLGRSG 233
T E+CACMVD+LGRSG
Sbjct: 394 TEEMCACMVDLLGRSG 409
>ref|XP_006340958.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum tuberosum]
Length = 632
Score = 102 bits (253), Expect = 7e-20
Identities = 48/77 (62%), Positives = 60/77 (77%)
Frame = +3
Query: 3 AYGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGIL 182
AY LHG+G AI L+++MLQ G++PD ITVVG+LSAC RSG V EGI IY S V + +
Sbjct: 414 AYSLHGNGQGAIVLYEKMLQYGMRPDRITVVGVLSACARSGLVDEGIRIYSSAVNKYDLE 473
Query: 183 PTPEICACMVDMLGRSG 233
PT EICAC+VDMLG++G
Sbjct: 474 PTLEICACIVDMLGKAG 490
>ref|XP_004247938.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum lycopersicum]
Length = 632
Score = 102 bits (253), Expect = 7e-20
Identities = 47/77 (61%), Positives = 61/77 (79%)
Frame = +3
Query: 3 AYGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGIL 182
AY LHG+G AI L+++MLQ G++PD IT+VG+LSAC RSG V EGI IY S V ++ +
Sbjct: 414 AYSLHGNGQGAIVLYEKMLQHGMRPDRITIVGVLSACARSGLVDEGIRIYSSAVNEYDLE 473
Query: 183 PTPEICACMVDMLGRSG 233
PT EICAC+VDMLG++G
Sbjct: 474 PTLEICACIVDMLGKAG 490
>ref|XP_006420400.1| hypothetical protein CICLE_v10004542mg [Citrus clementina]
gi|557522273|gb|ESR33640.1| hypothetical protein
CICLE_v10004542mg [Citrus clementina]
Length = 632
Score = 99.4 bits (246), Expect = 5e-19
Identities = 45/76 (59%), Positives = 60/76 (78%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G +A+ L+++M+ LG KPD IT+VG+LSAC RSG + EG++IY S + + I P
Sbjct: 412 YGLHGKGHEAVLLYNKMVCLGSKPDIITIVGVLSACGRSGLINEGLDIYNSVINTYRIKP 471
Query: 186 TPEICACMVDMLGRSG 233
T EICAC+VDMLGR+G
Sbjct: 472 TTEICACVVDMLGRAG 487
>ref|XP_006480219.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Citrus sinensis]
Length = 625
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/76 (57%), Positives = 58/76 (76%)
Frame = +3
Query: 6 YGLHGDGDKAISLFDEMLQLGIKPDNITVVGILSACCRSGSVREGINIYKSTVVDFGILP 185
YGLHG G +A+ L+++M+ LG KPD IT+VG+LSAC RSG + EG+ IY S + + P
Sbjct: 412 YGLHGKGHEAVLLYNKMVCLGSKPDIITIVGVLSACGRSGLINEGLEIYNSVINTYRFKP 471
Query: 186 TPEICACMVDMLGRSG 233
T EICAC+VDMLGR+G
Sbjct: 472 TTEICACVVDMLGRAG 487