BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00053323
         (675 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39452.3| unnamed protein product [Vitis vinifera]              331   1e-88
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   331   1e-88
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   331   1e-88
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   316   4e-84
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   313   3e-83
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   305   7e-81
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   305   7e-81
ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, part...   304   1e-80
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     303   3e-80
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   303   3e-80
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   298   1e-78
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   297   2e-78
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam...   295   7e-78
gb|EYU20150.1| hypothetical protein MIMGU_mgv1a002588mg [Mimulus...   286   4e-75
ref|XP_006836847.1| hypothetical protein AMTR_s00099p00074160 [A...   276   3e-72
ref|XP_007138408.1| hypothetical protein PHAVU_009G206300g [Phas...   269   5e-70
ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containi...   268   9e-70
ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containi...   268   9e-70
ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containi...   268   9e-70
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   268   1e-69

>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  331 bits (848), Expect = 1e-88
 Identities = 158/224 (70%), Positives = 184/224 (82%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            IQGLCEA+K DKIKE++E M+  G F+PDTCT NTL+ AHC  G+L EA  VFEKMSEL+
Sbjct: 350  IQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELR 409

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            VQPDSA+YS+L+R LC+ G+F RAEE FDEL +K  LL D GC PLVAAYNP+FEY C N
Sbjct: 410  VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 469

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAERVFRQL KRGTQDPPS+K LI+GHC EGTP AGFDLLVLMLRRDFVPD ETY 
Sbjct: 470  GKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 529

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
             +I+  L+K +   AHK+LEKMLKSSH P T+IFH+IL ALV++
Sbjct: 530  LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 573



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           K++ +EM+      PDT TFN L+   C    + E    F++MS  +  PD  +Y+ L+ 
Sbjct: 220 KQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVD 279

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+ + A  +   ++KK   L     +P V  Y  +   +C+     +A  +  ++
Sbjct: 280 GLCRAGKVKIAHNVVKGMVKKSPNL-----SPNVVTYTTLIRGYCMKQDMAEALSLLAEM 334

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLML-RRDFVPDVETYESLIE--CFLQK 108
             RG + +  ++  LI G C         ++L  M+    F+PD  T  +LI+  C + K
Sbjct: 335 VSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGK 394

Query: 107 NESSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
            E +F+    EKM +    P ++ +  ++ +L
Sbjct: 395 LEEAFS--VFEKMSELRVQPDSATYSVLVRSL 424



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
 Frame = -2

Query: 620 EMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRLCEN 441
           E  SGG        FN+L+ ++  AG   E++ VF+ M E+ V P   +++ L+  + + 
Sbjct: 154 EKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKR 213

Query: 440 GEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFK-RG 264
           G    A+++FDE+L         G TP    +N +   FC+N    +    F+++ + + 
Sbjct: 214 GRTSMAKQLFDEMLD------TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKC 267

Query: 263 TQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRR--DFVPDVETYESLIECFLQKNESSFA 90
             D  ++  L+ G C  G      +++  M+++  +  P+V TY +LI  +  K + + A
Sbjct: 268 DPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEA 327

Query: 89  HKTLEKMLKSSHHPKTSIFHTILTAL 12
              L +M+     P    ++T++  L
Sbjct: 328 LSLLAEMVSRGLKPNKITYNTLIQGL 353


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  331 bits (848), Expect = 1e-88
 Identities = 158/224 (70%), Positives = 184/224 (82%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            IQGLCEA+K DKIKE++E M+  G F+PDTCT NTL+ AHC  G+L EA  VFEKMSEL+
Sbjct: 350  IQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELR 409

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            VQPDSA+YS+L+R LC+ G+F RAEE FDEL +K  LL D GC PLVAAYNP+FEY C N
Sbjct: 410  VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 469

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAERVFRQL KRGTQDPPS+K LI+GHC EGTP AGFDLLVLMLRRDFVPD ETY 
Sbjct: 470  GKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 529

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
             +I+  L+K +   AHK+LEKMLKSSH P T+IFH+IL ALV++
Sbjct: 530  LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 573



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           K++ +EM+      PDT TFN L+   C    + E    F++MS  +  PD  +Y+ L+ 
Sbjct: 220 KQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVD 279

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+ + A  +   ++KK   L     +P V  Y  +   +C+     +A  +  ++
Sbjct: 280 GLCRAGKVKIAHNVVKGMVKKSPNL-----SPNVVTYTTLIRGYCMKQDMAEALSLLAEM 334

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLML-RRDFVPDVETYESLIE--CFLQK 108
             RG + +  ++  LI G C         ++L  M+    F+PD  T  +LI+  C + K
Sbjct: 335 VSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGK 394

Query: 107 NESSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
            E +F+    EKM +    P ++ +  ++ +L
Sbjct: 395 LEEAFS--VFEKMSELRVQPDSATYSVLVRSL 424



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
 Frame = -2

Query: 620 EMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRLCEN 441
           E  SGG        FN+L+ ++  AG   E++ VF+ M E+ V P   +++ L+  + + 
Sbjct: 154 EKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKR 213

Query: 440 GEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFK-RG 264
           G    A+++FDE+L         G TP    +N +   FC+N    +    F+++ + + 
Sbjct: 214 GRTSMAKQLFDEMLD------TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKC 267

Query: 263 TQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRR--DFVPDVETYESLIECFLQKNESSFA 90
             D  ++  L+ G C  G      +++  M+++  +  P+V TY +LI  +  K + + A
Sbjct: 268 DPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEA 327

Query: 89  HKTLEKMLKSSHHPKTSIFHTILTAL 12
              L +M+     P    ++T++  L
Sbjct: 328 LSLLAEMVSRGLKPNKITYNTLIQGL 353


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  331 bits (848), Expect = 1e-88
 Identities = 158/224 (70%), Positives = 184/224 (82%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            IQGLCEA+K DKIKE++E M+  G F+PDTCT NTL+ AHC  G+L EA  VFEKMSEL+
Sbjct: 421  IQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELR 480

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            VQPDSA+YS+L+R LC+ G+F RAEE FDEL +K  LL D GC PLVAAYNP+FEY C N
Sbjct: 481  VQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSN 540

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAERVFRQL KRGTQDPPS+K LI+GHC EGTP AGFDLLVLMLRRDFVPD ETY 
Sbjct: 541  GKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYG 600

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
             +I+  L+K +   AHK+LEKMLKSSH P T+IFH+IL ALV++
Sbjct: 601  LMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 644



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           K++ +EM+      PDT TFN L+   C    + E    F++MS  +  PD  +Y+ L+ 
Sbjct: 291 KQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVD 350

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+ + A  +   ++KK   L     +P V  Y  +   +C+     +A  +  ++
Sbjct: 351 GLCRAGKVKIAHNVVKGMVKKSPNL-----SPNVVTYTTLIRGYCMKQDMAEALSLLAEM 405

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLML-RRDFVPDVETYESLIE--CFLQK 108
             RG + +  ++  LI G C         ++L  M+    F+PD  T  +LI+  C + K
Sbjct: 406 VSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGK 465

Query: 107 NESSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
            E +F+    EKM +    P ++ +  ++ +L
Sbjct: 466 LEEAFS--VFEKMSELRVQPDSATYSVLVRSL 495


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  316 bits (810), Expect = 4e-84
 Identities = 153/222 (68%), Positives = 181/222 (81%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GLCE +K DKIK++ E  + GG F+PDTCT NTLMNAHCNAG L++AL VFEKM  L 
Sbjct: 341  IKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLN 400

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V+PDSA+YS+LIR LC+ G FERAE++FDEL +K  LL DDGCTPLVAAY  +FE+ C N
Sbjct: 401  VRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRN 460

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKT KAERVFRQL KRGTQDP SFKILI GHC EGT  AG++LLVLMLRRDFVPD+ETY+
Sbjct: 461  GKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQ 520

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALV 9
            SLI+  LQK E   A++TLEKM+KSSH P+TS FH+IL  L+
Sbjct: 521  SLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLL 562



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 12/220 (5%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           + V +EM+S     PDT TFN L+   C    + E    F++MS  +  PD  +Y+ L+ 
Sbjct: 211 QSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVD 270

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+   A  + + ++KK T L      P V  Y  +   +C+  +  +A  VF ++
Sbjct: 271 GLCRAGKVNIAHNVVNGMVKKSTNL-----NPDVVTYTTLVRGYCMKHEIDEALVVFEEM 325

Query: 275 FKRGTQ-DPPSFKILIMGHCN-----------EGTPHAGFDLLVLMLRRDFVPDVETYES 132
             +G + +  ++  LI G C            EG    G           F+PD  T  +
Sbjct: 326 VSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGG----------GFIPDTCTLNT 375

Query: 131 LIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
           L+         + A +  EKM+  +  P ++ +  ++  L
Sbjct: 376 LMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNL 415



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
 Frame = -2

Query: 674 IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKM-SEL 498
           I+   +A  F +  +V   M S G   P   TFN+L+      GR + A  VF++M S  
Sbjct: 163 IRSYGKAGLFQESVQVFNSMKSVG-VSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTY 221

Query: 497 QVQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCV 318
            V PD+ +++ILIR  C+N   +     F E+ +         C P +  YN + +  C 
Sbjct: 222 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSR-------FKCDPDLVTYNTLVDGLCR 274

Query: 317 NGKTKKAERVFRQLFKRGTQ---DPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDV 147
            GK   A  V   + K+ T    D  ++  L+ G+C +        +   M+ +   P+ 
Sbjct: 275 AGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNE 334

Query: 146 ETYESLIE--CFLQK 108
            TY +LI+  C +QK
Sbjct: 335 ITYNTLIKGLCEVQK 349


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
            gi|550323558|gb|ERP53036.1| hypothetical protein
            POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  313 bits (802), Expect = 3e-83
 Identities = 149/223 (66%), Positives = 182/223 (81%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GLCE +KFDKIKE++   + G  FVPDTCT+NTLMNA C+AG   EAL +F+KM EL+
Sbjct: 346  IKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELK 405

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            VQPDSA+YS+LIR LC+ G+FERAE++FD+L  +  LL DDGCTPLVAAYNPIF++ C N
Sbjct: 406  VQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKN 465

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKT KAERVFRQL K+GTQDPPS+K LI+GHC EGT  AG+ LL+ MLRRD+VPD ETY 
Sbjct: 466  GKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYV 525

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVK 6
             LI  FLQK E   A+KTLE+MLKSS+ PKTS+FH+IL+ L+K
Sbjct: 526  LLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLK 568



 Score = 76.3 bits (186), Expect = 9e-12
 Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
 Frame = -2

Query: 575 NTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRLCENGEFERAEEMFDELLK 396
           NTL+ ++ NAG  +EA+ +F  M    V P   +++ L+  L + G    A  +FDE+  
Sbjct: 165 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMC- 223

Query: 395 KGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFKRGTQ-DPPSFKILIMGHC 219
            GT     G TP    +N +   FC N    +  R F+++ +   + D  ++  L+ G C
Sbjct: 224 -GTY----GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLC 278

Query: 218 NEGTPHAGFDLLVLMLR--RDFVPDVETYESLIECFLQKNESSFAHKTLEKMLKSSHHPK 45
             G      +++  M++  +D  PDV TY +L+  +  K E   A    E+M+     P 
Sbjct: 279 RAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPN 338

Query: 44  TSIFHTILTAL 12
              ++T++  L
Sbjct: 339 DITYNTLIKGL 349



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 6/212 (2%)
 Frame = -2

Query: 629 VMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRL 450
           V +EM       PDT TFN L+   C    + E    F++MS    +PD  +Y+ L+  L
Sbjct: 218 VFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGL 277

Query: 449 CENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFK 270
           C  G+   A  +   ++KK   L     +P V  Y  +   +C+  +  +A  VF ++  
Sbjct: 278 CRAGKVRIAHNVVKGMVKKMKDL-----SPDVVTYTTLVRGYCMKQEIDEALVVFEEMVS 332

Query: 269 RGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLML-----RRDFVPDVETYESLIECFLQK 108
           RG + +  ++  LI G C        FD +  +L      R FVPD  TY +L+      
Sbjct: 333 RGLKPNDITYNTLIKGLCEV----QKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDA 388

Query: 107 NESSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
                A K  +KM +    P ++ +  ++  L
Sbjct: 389 GNFDEALKMFKKMKELKVQPDSATYSVLIRNL 420



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
 Frame = -2

Query: 593 PDTCTFNTLMNAHCNAGRLSEALVVFEKM-SELQVQPDSASYSILIRRLCENGEFERAEE 417
           P   TFN+L+      GR + A  VF++M     V PD+ +++ILIR  C+N   +    
Sbjct: 194 PSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFR 253

Query: 416 MFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFKRG---TQDPPS 246
            F E+ +         C P V  YN + +  C  GK + A  V + + K+    + D  +
Sbjct: 254 FFKEMSR-------FNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVT 306

Query: 245 FKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYESLIE--CFLQK 108
           +  L+ G+C +        +   M+ R   P+  TY +LI+  C +QK
Sbjct: 307 YTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQK 354


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  305 bits (782), Expect = 7e-81
 Identities = 144/224 (64%), Positives = 181/224 (80%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            +QGLCEAK+FD+IKE++E  +  G  +PDTCTFNTL+  HCN G L EA+ VFE M  L+
Sbjct: 341  VQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLK 400

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V+PDSA+YSILIR  C+ G F+RAE++FD+L+KK  LL DDGCTPL+AAYNP+FEYFC  
Sbjct: 401  VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKI 460

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAE+VFRQL +RGTQDP ++++LIMGHC EGT +   +LLVLMLRRD+VP++  YE
Sbjct: 461  GKTKKAEKVFRQLMRRGTQDPFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIYE 520

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            SLIE  LQKN+   A+ TLEKMLKSSH P++S FH ILT L+K+
Sbjct: 521  SLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSSTFHQILTELIKK 564



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
 Frame = -2

Query: 578 FNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRLCENGEFERAEEMFDELL 399
           FNTL+ ++  AG   E+L VF+ M  L + P   +++ L   L + G      E+FDE+L
Sbjct: 159 FNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEML 218

Query: 398 KKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFKRGTQ-DPPSFKILIMGH 222
           K        G  P V  +N +   FC+N    K  R F+++ +   + D  ++  ++ G 
Sbjct: 219 K------TFGAKPDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGL 272

Query: 221 CNEGTPHAGFDLLVLMLRR--DFVPDVETYESLIECFLQKNESSFAHKTLEKMLKSSHHP 48
           C  G      ++L  M++R     P+V +Y +L+  + +K E   A    E+M+     P
Sbjct: 273 CRAGKVEIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKP 332

Query: 47  KTSIFHTILTAL 12
            +  ++T++  L
Sbjct: 333 TSITYNTLVQGL 344



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 37/229 (16%)
 Frame = -2

Query: 638 IKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILI 459
           + E+ +EM+      PD  TFN L+   C    + +    F++M   + +PD  +Y+ ++
Sbjct: 210 VYELFDEMLKTFGAKPDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIV 269

Query: 458 RRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQ 279
             LC  G+ E A  +   ++K+G  L     +P V +Y  +   +C   + ++A  VF +
Sbjct: 270 DGLCRAGKVEIAHNVLKGMVKRGHQL-----SPNVVSYTTLVRGYCEKQEVERALDVFEE 324

Query: 278 LFKRGTQ-------------------------------------DPPSFKILIMGHCNEG 210
           +   G +                                     D  +F  LI  HCN G
Sbjct: 325 MIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITFHCNVG 384

Query: 209 TPHAGFDLLVLMLRRDFVPDVETYESLIECFLQKNESSFAHKTLEKMLK 63
                  +   ML     PD  TY  LI  F QK     A K  + ++K
Sbjct: 385 NLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMK 433


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  305 bits (782), Expect = 7e-81
 Identities = 147/223 (65%), Positives = 178/223 (79%)
 Frame = -2

Query: 671  QGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQV 492
            +GLCEAK+ DKIKE++E  + G  F PDTCTFNTLM++HC AG L EAL VF  MSEL+V
Sbjct: 341  KGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAGNLEEALKVFRMMSELKV 400

Query: 491  QPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNG 312
             PDSA+YS+LIR  CE  ++ +AEE+FDEL KK  LL D GCTP+VA+Y PIFEY C NG
Sbjct: 401  PPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVASYKPIFEYLCSNG 460

Query: 311  KTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYES 132
            +TKKA+ VFRQL KRGTQDPPSFK LIMGHC EGT  AG+ L+VLMLRRD+VPDV+ Y+S
Sbjct: 461  RTKKADEVFRQLLKRGTQDPPSFKTLIMGHCREGTYEAGYKLVVLMLRRDYVPDVKIYDS 520

Query: 131  LIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            LI+ FL+K     A +TLEKMLKSSH P+TS FH+IL AL+++
Sbjct: 521  LIDGFLEKGNPLLAQQTLEKMLKSSHLPRTSTFHSILAALLEK 563



 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 37/229 (16%)
 Frame = -2

Query: 638 IKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILI 459
           ++ V +EM+      PDT TFN L+   C +  + E    F++M   + +PD  +Y+ L+
Sbjct: 204 VRNVYDEMLGMYGVEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLV 263

Query: 458 RRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQ 279
             LC +G+ E A  +   ++ K +    +   P V  Y  +   +CV  +  +A  V  +
Sbjct: 264 DGLCRDGKVEIARNVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEE 323

Query: 278 LFKRG-------------------------------------TQDPPSFKILIMGHCNEG 210
           +  +G                                     T D  +F  L+  HC  G
Sbjct: 324 MTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAG 383

Query: 209 TPHAGFDLLVLMLRRDFVPDVETYESLIECFLQKNESSFAHKTLEKMLK 63
                  +  +M      PD  TY  LI  + ++ + S A +  +++ K
Sbjct: 384 NLEEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSK 432


>ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
            gi|462415618|gb|EMJ20355.1| hypothetical protein
            PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  304 bits (779), Expect = 1e-80
 Identities = 150/224 (66%), Positives = 178/224 (79%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GLCEA+K DKIKE+ E  + GGEF PDTCTFNTLM++HCNAG L EAL VF KMSEL+
Sbjct: 333  IKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELK 392

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V PDSA+YS+LI  LC+ G++ RAEE+FDEL KK  LL DDGC PLVA+YNPIF Y   N
Sbjct: 393  VPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSN 452

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKT+KAE VFRQL +RGTQDP S+K LIMG+C EGT  AG++LLV MLRRDFVPD E Y 
Sbjct: 453  GKTQKAEEVFRQLMRRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVPDEEIYV 512

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            SLI+  LQK +   A +TLEKMLKSSH P+TS FH++L  L+K+
Sbjct: 513  SLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHSLLAELLKQ 556



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           K V +EM+S     PDT TFN L+   C    + E    F+ MS  +  PD  +Y+ L+ 
Sbjct: 203 KNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVD 262

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+ E A  + + + K+   L     TP V  Y  +   +CV  +  KA  +  ++
Sbjct: 263 GLCRAGKVEIAHNVVNGMSKRSGDL-----TPNVVTYTTLIRGYCVKQEIDKALSILEEM 317

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLV-LMLRRDFVPDVETYESLIECFLQKNE 102
             RG + +  ++  LI G C         ++    M+  +F PD  T+ +L+        
Sbjct: 318 TTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCNAGN 377

Query: 101 SSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
              A K   KM +    P ++ +  ++ +L
Sbjct: 378 LDEALKVFAKMSELKVPPDSATYSVLICSL 407


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  303 bits (777), Expect = 3e-80
 Identities = 148/224 (66%), Positives = 178/224 (79%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GLCEA+K D ++++++  +  GEFVP+TCTFNTL++ HC AGRL EAL VFEKM ELQ
Sbjct: 393  IKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQAGRLDEALKVFEKMLELQ 452

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V  DSA+YS LIR LC+ G++ RAEE+FD+L  K  LL DDGC P+VAAYNP+FE+ C N
Sbjct: 453  VLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILLSDDGCRPIVAAYNPMFEHLCRN 512

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAERVFRQL KRGTQDPPS+K LIMGHC EGT  AG++LLVLMLRRDFVPD E YE
Sbjct: 513  GKTKKAERVFRQLMKRGTQDPPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAEIYE 572

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            SLI   LQK++   A  TLEKML+SSH P+ S FH IL  L+K+
Sbjct: 573  SLITGLLQKDKPLLAKTTLEKMLRSSHLPRASAFHCILEELLKK 616



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           + V +EM+      PDT TFN L+   C    + E    F++MS  + +PD  +Y+ L+ 
Sbjct: 263 RNVFDEMLGTYGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVD 322

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+ + A  +   + KK   L      P +  Y  + + +C   +  +A  V +++
Sbjct: 323 GLCRAGKVDIARNVVKGMSKKSVDL-----NPNIVTYTTLIKGYCGKQEIDEALLVLKEM 377

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLMLRR-DFVPDVETYESLIECFLQKNE 102
            +RG + +  ++  LI G C          +L   +RR +FVP+  T+ +LI    Q   
Sbjct: 378 TERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQAGR 437

Query: 101 SSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
              A K  EKML+      ++ +  ++ +L
Sbjct: 438 LDEALKVFEKMLELQVLQDSATYSALIRSL 467



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
 Frame = -2

Query: 620 EMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRLCEN 441
           E  S G    +   FN+L+ ++ NAG   E++ +F  M EL + P   +++ L+  L + 
Sbjct: 197 EKKSNGSVKLEDRFFNSLIRSYGNAGLFQESVKLFSTMKELAIAPSVVTFNSLLLVLLKR 256

Query: 440 GEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFK-RG 264
           G    A  +FDE+L  GT     G  P    +N +   FC+N    +    F+++ + + 
Sbjct: 257 GRTNMARNVFDEML--GTY----GVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKC 310

Query: 263 TQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRR--DFVPDVETYESLIECFLQKNESSFA 90
             D  ++  L+ G C  G      +++  M ++  D  P++ TY +LI+ +  K E   A
Sbjct: 311 EPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQEIDEA 370

Query: 89  HKTLEKMLKSSHHPKTSIFHTILTAL 12
              L++M +    P    ++T++  L
Sbjct: 371 LLVLKEMTERGLKPNGITYNTLIKGL 396


>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  303 bits (776), Expect = 3e-80
 Identities = 143/224 (63%), Positives = 180/224 (80%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            +QGLCEAK+FD+IKE++E  +  G  +PDTCTFNTL+  HCN G L EA+ VFE M  L+
Sbjct: 335  VQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLK 394

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V+PDSA+YSILIR  C+ G F+RAE++FD+L+KK  LL DDGCTPL+AAYNP+FEYFC  
Sbjct: 395  VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKI 454

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAE+VFRQL +RGTQDP ++++LI GHC EGT +    LLVLMLRRD+VP++  YE
Sbjct: 455  GKTKKAEKVFRQLMRRGTQDPFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIYE 514

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            SLIE  LQKN+   A+ TLEKMLKSSH P++SI+H ILT L+K+
Sbjct: 515  SLIEGLLQKNDPKVAYDTLEKMLKSSHLPRSSIYHQILTELIKK 558



 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
 Frame = -2

Query: 578 FNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRLCENGEFERAEEMFDELL 399
           FNTL+ ++  AG   E+L VF+ M  L + P   +++ L   L + G      E+FDE+L
Sbjct: 153 FNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEML 212

Query: 398 KKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFKRGTQ-DPPSFKILIMGH 222
           K        G  P V  +N +   FC+N    K  R F+++ +   + +  ++  ++ G 
Sbjct: 213 K------TFGAKPDVYTFNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGL 266

Query: 221 CNEGTPHAGFDLLVLMLRR--DFVPDVETYESLIECFLQKNESSFAHKTLEKMLKSSHHP 48
           C  G      ++L  M +R     P+V +Y +L+  + +K E   A    E+M+     P
Sbjct: 267 CRAGKVEIAHNVLKGMAKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKP 326

Query: 47  KTSIFHTILTAL 12
            +  ++T++  L
Sbjct: 327 TSITYNTLVQGL 338



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 37/229 (16%)
 Frame = -2

Query: 638 IKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILI 459
           + E+ +EM+      PD  TFN L+   C    + +    F++M   + +P+  +Y+ ++
Sbjct: 204 VYELFDEMLKTFGAKPDVYTFNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIV 263

Query: 458 RRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQ 279
             LC  G+ E A  +   + K+G  L     +P V +Y  +   +C   + ++A  VF +
Sbjct: 264 DGLCRAGKVEIAHNVLKGMAKRGHQL-----SPNVVSYTTLVRGYCEKQEVERALDVFEE 318

Query: 278 LFKRGTQ-------------------------------------DPPSFKILIMGHCNEG 210
           +  RG +                                     D  +F  LI  HCN G
Sbjct: 319 MIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCNVG 378

Query: 209 TPHAGFDLLVLMLRRDFVPDVETYESLIECFLQKNESSFAHKTLEKMLK 63
                  +   ML     PD  TY  LI  F QK     A K  + ++K
Sbjct: 379 NLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMK 427


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  298 bits (763), Expect = 1e-78
 Identities = 138/224 (61%), Positives = 179/224 (79%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GLCEA+KF+KIK+++E     G F PDTCTFNTLM+ HC+AG L +AL VFE+MSEL+
Sbjct: 334  IKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            +QPDSA+YS L+R LC+ G +E+AE++ D+LL++  LL  DGC PLVAAYNPIF+Y C  
Sbjct: 394  IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAE+ FRQL +RGTQDPPS+K LIMGHC EGT  +G++LLVLMLR+DF+PD ETYE
Sbjct: 454  GKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYE 513

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            SLI   L  ++   A ++LEKML+SSH P +S FH+IL  L+++
Sbjct: 514  SLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQ 557



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           K+V +EM+S     PDT TFN L+   C  G + +   +F  +S    +PD  +Y+ L+ 
Sbjct: 204 KKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVD 263

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+   A  +   + KK   L      P V  Y  +   +C   + +KA  VF ++
Sbjct: 264 GLCRAGKVTVAYNVVKGMGKKSVDL-----NPNVVTYTTLIRGYCAKREIEKALAVFEEM 318

Query: 275 FKRGTQ-DPPSFKILIMGHCN-----------EGTPHAGFDLLVLMLRRDFVPDVETYES 132
             +G + +  ++  LI G C            EGT   G           F PD  T+ +
Sbjct: 319 VNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDG----------TFSPDTCTFNT 368

Query: 131 LIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
           L+ C         A K  E+M +    P ++ +  ++ +L
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSL 408


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  297 bits (761), Expect = 2e-78
 Identities = 138/224 (61%), Positives = 178/224 (79%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GLCEA+KF+KIK+++E     G F PDTCTFNTLM+ HC+AG L +AL VFE+MSEL+
Sbjct: 334  IKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            +QPDSA+YS L+R LC+ G +E+AE++ D+LL++  LL  DGC PLVAAYNPIF+Y C  
Sbjct: 394  IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAE+ FRQL +RGTQDPPS+K LIMGHC EGT  +G++LLVLMLR+DF PD ETYE
Sbjct: 454  GKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYE 513

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            SLI   L  ++   A ++LEKML+SSH P +S FH+IL  L+++
Sbjct: 514  SLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQ 557



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           K+V +EM+S     PDT TFN L+   C  G + +   +F  +S    +PD  +Y+ L+ 
Sbjct: 204 KKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVD 263

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+   A  +   + KK   L      P V  Y  +   +C   + +KA  VF ++
Sbjct: 264 GLCRAGKVTVAYNVVKGMGKKSVDL-----NPNVVTYTTLIRGYCAKREIEKALAVFEEM 318

Query: 275 FKRGTQ-DPPSFKILIMGHCN-----------EGTPHAGFDLLVLMLRRDFVPDVETYES 132
             +G + +  ++  LI G C            EGT   G           F PD  T+ +
Sbjct: 319 VNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDG----------TFSPDTCTFNT 368

Query: 131 LIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
           L+ C         A K  E+M +    P ++ +  ++ +L
Sbjct: 369 LMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSL 408


>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508704486|gb|EOX96382.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 724

 Score =  295 bits (756), Expect = 7e-78
 Identities = 146/224 (65%), Positives = 174/224 (77%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GL E  +++KIKE++E M   G FVPDTCT NTL+NAHCNA  + EAL VF++MSEL 
Sbjct: 345  IKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRMSELN 404

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V PDSA+YS++IR LC+ G+FE+AEE FDEL +K  LL D GCTPLVAAYNP+FEY C N
Sbjct: 405  VLPDSATYSVIIRSLCQRGDFEKAEEFFDELAEKEILLSDVGCTPLVAAYNPMFEYLCGN 464

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAE VFRQL KRG QDPP++K LI+GHC EGT   G++LLVLMLRRDF P  E Y+
Sbjct: 465  GKTKKAEIVFRQLMKRGRQDPPAYKTLILGHCREGTFKDGYELLVLMLRRDFEPGFEIYD 524

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            SLI   LQK E   AH TLEKMLKSSH P+TS  H+IL  L+K+
Sbjct: 525  SLICGLLQKGEPLLAHLTLEKMLKSSHLPQTSSVHSILAELLKK 568



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 3/206 (1%)
 Frame = -2

Query: 620 EMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRLCEN 441
           E  S G    +   FN+L+ ++  AG   E++ VFE M  + V P   S++ L+  L + 
Sbjct: 149 EKRSNGSVKLEDQFFNSLIRSYGKAGLFQESIKVFETMKGIGVSPSVVSFNNLLMILLKR 208

Query: 440 GEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFK-RG 264
           G    A+ +FDE+L         G +P V  +N +   FC+N    +  R F+++ + + 
Sbjct: 209 GRTNMAKSVFDEMLS------TYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEMERFKC 262

Query: 263 TQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRR--DFVPDVETYESLIECFLQKNESSFA 90
             D  ++  ++ G C  G      +++  M ++  D  P+V TY +L+  +  K E   A
Sbjct: 263 DPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTTLVRGYCMKQEIDEA 322

Query: 89  HKTLEKMLKSSHHPKTSIFHTILTAL 12
               ++M+     P    ++T++  L
Sbjct: 323 LVVFKEMISRRLRPNRITYNTLIKGL 348



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 3/211 (1%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           K V +EM+S     PD  TFN L+   C    + E    F++M   +  PD  +Y+ ++ 
Sbjct: 215 KSVFDEMLSTYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVD 274

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+   A  +   + KK   L      P V  Y  +   +C+  +  +A  VF+++
Sbjct: 275 GLCRAGKVGIARNVVRGMSKKSLDL-----NPNVVTYTTLVRGYCMKQEIDEALVVFKEM 329

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLMLRRD--FVPDVETYESLIECFLQKN 105
             R  + +  ++  LI G  +E   +     ++  +  D  FVPD  T  +LI       
Sbjct: 330 ISRRLRPNRITYNTLIKG-LSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAHCNAE 388

Query: 104 ESSFAHKTLEKMLKSSHHPKTSIFHTILTAL 12
               A    ++M + +  P ++ +  I+ +L
Sbjct: 389 NMDEALNVFKRMSELNVLPDSATYSVIIRSL 419


>gb|EYU20150.1| hypothetical protein MIMGU_mgv1a002588mg [Mimulus guttatus]
          Length = 656

 Score =  286 bits (732), Expect = 4e-75
 Identities = 138/224 (61%), Positives = 170/224 (75%)
 Frame = -2

Query: 674 IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
           IQGLCE++KFD IKEV+ E   GG  VPDTCTFNT+MNAHCN+G L EAL+ FEKM E+ 
Sbjct: 288 IQGLCESRKFDMIKEVLREC--GGTIVPDTCTFNTMMNAHCNSGNLEEALIFFEKMKEMN 345

Query: 494 VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
           V+ DSA+YS++IR LCE G FE+AEE+ DEL  +  LL  D CTP++AAYNPIF Y C N
Sbjct: 346 VKRDSATYSVIIRALCEKGSFEKAEELLDELFGEEILLRGDNCTPIIAAYNPIFNYLCTN 405

Query: 314 GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
           GKTKKAERVFRQL KRGT DP +F+ LI G C EG      +LL+LMLRRDF+P V+ YE
Sbjct: 406 GKTKKAERVFRQLMKRGTHDPIAFETLIFGQCKEGNFQDAHNLLILMLRRDFLPSVKIYE 465

Query: 134 SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
           SLI+  L+K E++ AH TLEKML+S + P+ S FH +L  LV++
Sbjct: 466 SLIDGLLKKKEANLAHDTLEKMLRSKYIPRASKFHGVLMELVEK 509



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
 Frame = -2

Query: 641 KIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ-VQPDSASYSI 465
           KI +VM+ M       P T TFN+L +     GR+     ++ +M +    +PDS ++++
Sbjct: 124 KIFQVMKSMAVS----PSTVTFNSLFSILLKRGRMGMVFELYNEMLKTYGAKPDSYTFNV 179

Query: 464 LIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVF 285
           LIR LC N   + A  MF E+ K         C P +  YN I +  C  GK   A  V 
Sbjct: 180 LIRGLCMNSSVDEAFRMFKEMEK-------FDCKPDLITYNTIVDGLCRTGKVSIARNVV 232

Query: 284 RQLFKRGTQDPP---SFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYESLIECFL 114
             LFK      P   ++  LI G+C +      FD+   M+     P+  T  +LI+   
Sbjct: 233 TGLFKTCEDLRPNVVTYTTLIRGYCGKREIEEAFDVFREMIGGGITPNEITCNTLIQGLC 292

Query: 113 QKNESSFAHKTLEKMLKSSHHPKTSIFHTILTA 15
           +  +     + L +    +  P T  F+T++ A
Sbjct: 293 ESRKFDMIKEVLRE-CGGTIVPDTCTFNTMMNA 324



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 4/225 (1%)
 Frame = -2

Query: 665 LCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQP 486
           L +  +   + E+  EM+      PD+ TFN L+   C    + EA  +F++M +   +P
Sbjct: 148 LLKRGRMGMVFELYNEMLKTYGAKPDSYTFNVLIRGLCMNSSVDEAFRMFKEMEKFDCKP 207

Query: 485 DSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKT 306
           D  +Y+ ++  LC  G+   A  +   L K     C+D   P V  Y  +   +C   + 
Sbjct: 208 DLITYNTIVDGLCRTGKVSIARNVVTGLFK----TCED-LRPNVVTYTTLIRGYCGKREI 262

Query: 305 KKAERVFRQLFKRG-TQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRR---DFVPDVETY 138
           ++A  VFR++   G T +  +   LI G C        FD++  +LR      VPD  T+
Sbjct: 263 EEAFDVFREMIGGGITPNEITCNTLIQGLCES----RKFDMIKEVLRECGGTIVPDTCTF 318

Query: 137 ESLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            +++           A    EKM + +    ++ +  I+ AL ++
Sbjct: 319 NTMMNAHCNSGNLEEALIFFEKMKEMNVKRDSATYSVIIRALCEK 363



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 2/204 (0%)
 Frame = -2

Query: 674 IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSEL- 498
           I+GLC     D+   + +EM    +  PD  T+NT+++  C  G++S A  V   + +  
Sbjct: 181 IRGLCMNSSVDEAFRMFKEM-EKFDCKPDLITYNTIVDGLCRTGKVSIARNVVTGLFKTC 239

Query: 497 -QVQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFC 321
             ++P+  +Y+ LIR  C   E E A ++F E++         G TP     N + +  C
Sbjct: 240 EDLRPNVVTYTTLIRGYCGKREIEEAFDVFREMI-------GGGITPNEITCNTLIQGLC 292

Query: 320 VNGKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVET 141
            + K    + V R+       D  +F  ++  HCN G           M   +   D  T
Sbjct: 293 ESRKFDMIKEVLRECGGTIVPDTCTFNTMMNAHCNSGNLEEALIFFEKMKEMNVKRDSAT 352

Query: 140 YESLIECFLQKNESSFAHKTLEKM 69
           Y  +I    +K     A + L+++
Sbjct: 353 YSVIIRALCEKGSFEKAEELLDEL 376


>ref|XP_006836847.1| hypothetical protein AMTR_s00099p00074160 [Amborella trichopoda]
            gi|548839411|gb|ERM99700.1| hypothetical protein
            AMTR_s00099p00074160 [Amborella trichopoda]
          Length = 715

 Score =  276 bits (707), Expect = 3e-72
 Identities = 135/224 (60%), Positives = 169/224 (75%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            IQGL EA+K DKI E+++E++   EF PDTCTFNTLMNAHCNA RL +AL +F K SE++
Sbjct: 334  IQGLSEAQKLDKINEILKEIMHSAEFRPDTCTFNTLMNAHCNADRLEDALAIFSKFSEIK 393

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V+ DSA+YS+LIR LC    FE A E+ D+L+  G LL   GC PLVA Y  I EY C N
Sbjct: 394  VEADSATYSVLIRNLCLRDRFEEAAELLDDLVDGGVLLKPGGCIPLVAGYKHILEYLCKN 453

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
             KT+KAE  FRQL KRGTQDP SF+ILI+GHC EG P  GF+LLVLMLRRDFVPDVETY 
Sbjct: 454  RKTEKAEIAFRQLHKRGTQDPFSFQILILGHCREGNPKNGFNLLVLMLRRDFVPDVETYL 513

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
            +L++ F++  +  FA KTLE+ML+S H P+TSIF +I+  L+++
Sbjct: 514  ALLKGFIEMRDPIFALKTLERMLRSRHVPQTSIFFSIIDMLMRD 557



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
 Frame = -2

Query: 641 KIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSIL 462
           K+  +M+E        P   T+N L       GR +    ++E M    + PD  +++IL
Sbjct: 171 KVIRMMKEF----RVAPSVLTYNNLFGILLRRGRTNMVKKLYEDMGREGISPDVYTFNIL 226

Query: 461 IRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFR 282
           IR  C N   + +  +F++      ++C  GC P +  YN + +  C  GK   A ++F 
Sbjct: 227 IRGFCMNSMVDESFWLFND------MVC-HGCVPDMVTYNTLLDGLCRAGKVDNARKLFD 279

Query: 281 QLFKRGTQDPP---SFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYESLIECFLQ 111
            L ++G    P   ++  LI G+C +        +   M+     P+  TY +LI+   +
Sbjct: 280 GLLRKGDALVPNVVTYTTLIRGYCEKRLIGEAMKVYEEMVNGGVKPNNVTYNTLIQGLSE 339

Query: 110 KNESSFAHKTLEKMLKSSH-HPKTSIFHTILTA 15
             +    ++ L++++ S+   P T  F+T++ A
Sbjct: 340 AQKLDKINEILKEIMHSAEFRPDTCTFNTLMNA 372



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
 Frame = -2

Query: 638 IKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILI 459
           +K++ E+M   G   PD  TFN L+   C    + E+  +F  M      PD  +Y+ L+
Sbjct: 204 VKKLYEDMGREG-ISPDVYTFNILIRGFCMNSMVDESFWLFNDMVCHGCVPDMVTYNTLL 262

Query: 458 RRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQ 279
             LC  G+ + A ++FD LL+KG     D   P V  Y  +   +C      +A +V+ +
Sbjct: 263 DGLCRAGKVDNARKLFDGLLRKG-----DALVPNVVTYTTLIRGYCEKRLIGEAMKVYEE 317

Query: 278 LFKRGTQ-DPPSFKILIMGHCN-EGTPHAGFDLLVLMLRRDFVPDVETYESLI--ECFLQ 111
           +   G + +  ++  LI G    +        L  +M   +F PD  T+ +L+   C   
Sbjct: 318 MVNGGVKPNNVTYNTLIQGLSEAQKLDKINEILKEIMHSAEFRPDTCTFNTLMNAHCNAD 377

Query: 110 KNESSFA 90
           + E + A
Sbjct: 378 RLEDALA 384


>ref|XP_007138408.1| hypothetical protein PHAVU_009G206300g [Phaseolus vulgaris]
            gi|561011495|gb|ESW10402.1| hypothetical protein
            PHAVU_009G206300g [Phaseolus vulgaris]
          Length = 728

 Score =  269 bits (688), Expect = 5e-70
 Identities = 131/224 (58%), Positives = 171/224 (76%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GLCEA K DK+K+V++ M   G F PDT TFNT++++HC AG L EAL VFE M + Q
Sbjct: 332  IKGLCEAHKLDKMKDVLKWMKDNGGFSPDTFTFNTIIHSHCCAGNLDEALKVFESMKKFQ 391

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V+ DSASYS LIR LC+ G+++ AE +FDEL +K  LLC+ G  PLVAAY+P+F+Y C +
Sbjct: 392  VRMDSASYSTLIRSLCQKGDYDMAELLFDELFEKEILLCNFGSKPLVAAYSPLFQYLCEH 451

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GK+KKAERV RQL KRGTQD  S+K LIMGHC EG   +G++ LV MLRRDF+PDV+ Y+
Sbjct: 452  GKSKKAERVMRQLMKRGTQDAQSYKTLIMGHCKEGAYESGYEFLVWMLRRDFLPDVDIYD 511

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
             LI+ FL KN+   A +TLEKMLKSS+ PKT+ +H+IL  L+++
Sbjct: 512  YLIDGFLLKNKPLLAKETLEKMLKSSYQPKTATWHSILAKLLEK 555



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           KEV +EM+      PD CT+N L+   C    + E    F +M+ +   PD  +Y+ L+ 
Sbjct: 202 KEVYDEMLHTYGVTPDICTYNVLIRGFCKNSMVDEGFRFFNEMATVNCDPDIVTYNTLVD 261

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+   A  + + + KK    C +G  P V  Y  +   +C+  +  +A  V  ++
Sbjct: 262 GLCRAGKVRIARNLVNAMTKK----C-EGLNPNVVTYTTLIRGYCMKQEVDEALVVLEEM 316

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLML-RRDFVPDVETYESLIECFLQKNE 102
             RG + +  ++  LI G C         D+L  M     F PD  T+ ++I        
Sbjct: 317 SGRGIEPNMITYNTLIKGLCEAHKLDKMKDVLKWMKDNGGFSPDTFTFNTIIHSHCCAGN 376

Query: 101 SSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
              A K  E M K      ++ + T++ +L ++
Sbjct: 377 LDEALKVFESMKKFQVRMDSASYSTLIRSLCQK 409


>ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X3 [Glycine max]
          Length = 734

 Score =  268 bits (686), Expect = 9e-70
 Identities = 129/224 (57%), Positives = 169/224 (75%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            ++GLCEA K DK+K+V+E M S G F PDT TFNT+++ HC AG L EAL VFE M + +
Sbjct: 335  VKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFR 394

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            +  DSASYS LIR LC+ G+++ AE++FDEL +K  LL   G  PL A+YNPIFE  C +
Sbjct: 395  IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEH 454

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAERV RQL KRGTQDP S+  +IMGHC EG   +G++LL+ MLRRDF+PD+E Y+
Sbjct: 455  GKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYD 514

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
             LI+ FLQK++   A +TLEKMLKSS+ PKTS +H++L  L+++
Sbjct: 515  YLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEK 558



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           KEV +EM+      PDTCT+N L+   C    + E    F +M       D  +Y+ L+ 
Sbjct: 205 KEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVD 264

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+   A  + + + KK    C +G  P V  Y  +   +C+  + ++A  V  ++
Sbjct: 265 GLCRAGKVRIARNLVNGMGKK----C-EGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEM 319

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLMLR-RDFVPDVETYESLIECFLQKNE 102
             RG + +  ++  L+ G C         D+L  M     F PD  T+ ++I        
Sbjct: 320 TSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGN 379

Query: 101 SSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
              A K  E M K      ++ + T++ +L ++
Sbjct: 380 LDEALKVFESMKKFRIPADSASYSTLIRSLCQK 412


>ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 741

 Score =  268 bits (686), Expect = 9e-70
 Identities = 129/224 (57%), Positives = 169/224 (75%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            ++GLCEA K DK+K+V+E M S G F PDT TFNT+++ HC AG L EAL VFE M + +
Sbjct: 333  VKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFR 392

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            +  DSASYS LIR LC+ G+++ AE++FDEL +K  LL   G  PL A+YNPIFE  C +
Sbjct: 393  IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEH 452

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAERV RQL KRGTQDP S+  +IMGHC EG   +G++LL+ MLRRDF+PD+E Y+
Sbjct: 453  GKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYD 512

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
             LI+ FLQK++   A +TLEKMLKSS+ PKTS +H++L  L+++
Sbjct: 513  YLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEK 556



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           KEV +EM+      PDTCT+N L+   C    + E    F +M       D  +Y+ L+ 
Sbjct: 203 KEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVD 262

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+   A  + + + KK    C +G  P V  Y  +   +C+  + ++A  V  ++
Sbjct: 263 GLCRAGKVRIARNLVNGMGKK----C-EGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEM 317

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLMLR-RDFVPDVETYESLIECFLQKNE 102
             RG + +  ++  L+ G C         D+L  M     F PD  T+ ++I        
Sbjct: 318 TSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGN 377

Query: 101 SSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
              A K  E M K      ++ + T++ +L ++
Sbjct: 378 LDEALKVFESMKKFRIPADSASYSTLIRSLCQK 410


>ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 743

 Score =  268 bits (686), Expect = 9e-70
 Identities = 129/224 (57%), Positives = 169/224 (75%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            ++GLCEA K DK+K+V+E M S G F PDT TFNT+++ HC AG L EAL VFE M + +
Sbjct: 335  VKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFR 394

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            +  DSASYS LIR LC+ G+++ AE++FDEL +K  LL   G  PL A+YNPIFE  C +
Sbjct: 395  IPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEH 454

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAERV RQL KRGTQDP S+  +IMGHC EG   +G++LL+ MLRRDF+PD+E Y+
Sbjct: 455  GKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYD 514

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
             LI+ FLQK++   A +TLEKMLKSS+ PKTS +H++L  L+++
Sbjct: 515  YLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEK 558



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           KEV +EM+      PDTCT+N L+   C    + E    F +M       D  +Y+ L+ 
Sbjct: 205 KEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVD 264

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQL 276
            LC  G+   A  + + + KK    C +G  P V  Y  +   +C+  + ++A  V  ++
Sbjct: 265 GLCRAGKVRIARNLVNGMGKK----C-EGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEM 319

Query: 275 FKRGTQ-DPPSFKILIMGHCNEGTPHAGFDLLVLMLR-RDFVPDVETYESLIECFLQKNE 102
             RG + +  ++  L+ G C         D+L  M     F PD  T+ ++I        
Sbjct: 320 TSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGN 379

Query: 101 SSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
              A K  E M K      ++ + T++ +L ++
Sbjct: 380 LDEALKVFESMKKFRIPADSASYSTLIRSLCQK 412


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355497542|gb|AES78745.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  268 bits (685), Expect = 1e-69
 Identities = 128/224 (57%), Positives = 172/224 (76%)
 Frame = -2

Query: 674  IQGLCEAKKFDKIKEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQ 495
            I+GLCEA+K+DK+KE++E+M   G  +PD CTFNTL+N+HC AG L EA  VFE M +L+
Sbjct: 340  IKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLE 399

Query: 494  VQPDSASYSILIRRLCENGEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVN 315
            V  DSASYS+LIR LC+ G++ +AE +FDEL +K  LL   G  PL A+Y  +F+Y C N
Sbjct: 400  VSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCEN 459

Query: 314  GKTKKAERVFRQLFKRGTQDPPSFKILIMGHCNEGTPHAGFDLLVLMLRRDFVPDVETYE 135
            GKTKKAERV RQL KRGTQDP S++I+I+GHC EG+   G+ LLV MLRRDF+PD++ Y+
Sbjct: 460  GKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYD 519

Query: 134  SLIECFLQKNESSFAHKTLEKMLKSSHHPKTSIFHTILTALVKE 3
             LI+ FL+K++   A +TLEKMLKSS+ P+TS +H+IL  L+++
Sbjct: 520  YLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQ 563



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
 Frame = -2

Query: 620 EMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIRRLCEN 441
           E  S GE   +   FN+L+ ++  AG   E++ +FE M  + V P   +++ ++  L + 
Sbjct: 144 EKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKR 203

Query: 440 GEFERAEEMFDELLKKGTLLCDDGCTPLVAAYNPIFEYFCVNGKTKKAERVFRQLFKRGT 261
           G    A+E++DE+LK        G  P    YN +   FC N    +    F+++     
Sbjct: 204 GRTNMAKEVYDEMLK------TYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDC 257

Query: 260 Q-DPPSFKILIMGHCNEGTPHAGFDLLVLMLR--RDFVPDVETYESLIECFLQKNESSFA 90
             D  ++  L+ G C  G      +L+  M +  +D  PDV TY +LI  + +K E   A
Sbjct: 258 DPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEA 317

Query: 89  HKTLEKMLKSSHHPKTSIFHTILTAL 12
              LE+M      P    ++T++  L
Sbjct: 318 LDILEEMNGRGLKPNIVTYNTLIKGL 343



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 57/234 (24%), Positives = 89/234 (38%), Gaps = 37/234 (15%)
 Frame = -2

Query: 635 KEVMEEMISGGEFVPDTCTFNTLMNAHCNAGRLSEALVVFEKMSELQVQPDSASYSILIR 456
           KEV +EM+      PDT T+N L+   C    + E    F++M+     PD  +Y+ L+ 
Sbjct: 210 KEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVD 269

Query: 455 RLCENGEFERAEEMFDELLKKGTLLCDD------------------------------GC 366
            LC  G+ + A  + + + KK   L  D                              G 
Sbjct: 270 GLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGL 329

Query: 365 TPLVAAYNPIFEYFCVNGKTKKAERVFRQLFKRGTQDPP--SFKILIMGHCNEGTPHAGF 192
            P +  YN + +  C   K  K + +  Q+   G   P   +F  LI  HC  G     F
Sbjct: 330 KPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAF 389

Query: 191 DLLVLMLRRDFVPDVETYESLIECFLQKNESSFAHKTLEKM-----LKSSHHPK 45
            +   M + +   D  +Y  LI    QK +   A    +++     L SS+ PK
Sbjct: 390 KVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPK 443