BLASTX nr result
ID: Cocculus23_contig00053302
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00053302
(263 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S... 61 1e-07
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon... 60 3e-07
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g... 60 3e-07
gb|EAZ15506.1| hypothetical protein OsJ_30915 [Oryza sativa Japo... 60 3e-07
gb|AAP52492.2| hypothetical protein LOC_Os10g10730 [Oryza sativa... 60 3e-07
gb|AAP52578.2| hypothetical protein LOC_Os10g11620 [Oryza sativa... 60 3e-07
gb|AAN09850.1| putative helicase, 3'-partial [Oryza sativa Japon... 60 3e-07
ref|XP_004509812.1| PREDICTED: ATP-dependent helicase RRM3-like ... 59 9e-07
gb|EEE56994.1| hypothetical protein OsJ_06737 [Oryza sativa Japo... 59 9e-07
ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [S... 58 2e-06
emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group] g... 57 2e-06
gb|AAO34493.1| putative helicase [Oryza sativa Japonica Group] 57 2e-06
gb|EEE60808.1| hypothetical protein OsJ_14407 [Oryza sativa Japo... 57 2e-06
gb|EEE59513.1| hypothetical protein OsJ_11765 [Oryza sativa Japo... 57 2e-06
gb|ABF97674.1| expressed protein [Oryza sativa Japonica Group] 57 2e-06
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S... 57 4e-06
ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [S... 57 4e-06
ref|XP_002459026.1| hypothetical protein SORBIDRAFT_03g044710 [S... 55 8e-06
ref|XP_002467434.1| hypothetical protein SORBIDRAFT_01g028040 [S... 55 8e-06
ref|XP_002464527.1| hypothetical protein SORBIDRAFT_01g020130 [S... 55 8e-06
>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
gi|241946187|gb|EES19332.1| hypothetical protein
SORBIDRAFT_09g016160 [Sorghum bicolor]
Length = 1379
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/85 (36%), Positives = 44/85 (51%)
Frame = +2
Query: 5 PEHFVWNKKLEAWTRRKRGHVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVNNV 184
PEH+ W + W RRK+ + RIV N NH++G SFE+LK V +
Sbjct: 720 PEHYRWISGRKIWQRRKQKGQIGRIVYANPSEGERYYLRVLLNHVRGPTSFEDLKTVAGI 779
Query: 185 SASSFRESALLHGLLKAYNNLELCL 259
S+FRES GL++ N ++ CL
Sbjct: 780 LCSTFRESCEKRGLIETDNTIDDCL 804
>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
Length = 1443
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV-VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPE F W + W RRKR + RIVT + H+ G SFE L+ V+
Sbjct: 777 FPEAFTWQAGPKVWQRRKRRITQIGRIVTAHPAEGERYYLRVLLTHVTGATSFEHLRTVD 836
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
SSFRE+A GL++A N L+ CL
Sbjct: 837 GEVCSSFREAAEKRGLIEADNTLDECL 863
>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
Japonica Group]
Length = 1575
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV-VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPE F W + W RRKR + RIVT + H+ G SFE L+ V+
Sbjct: 936 FPEAFTWQAGPKVWQRRKRRITQIGRIVTAHPAEGERYYLRVLLTHVTGATSFEHLRTVD 995
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
SSFRE+A GL++A N L+ CL
Sbjct: 996 GEVCSSFREAAEQRGLIEADNTLDECL 1022
>gb|EAZ15506.1| hypothetical protein OsJ_30915 [Oryza sativa Japonica Group]
Length = 1200
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV-VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPE F W + W RRKR + RIVT + H+ G SFE L+ V+
Sbjct: 964 FPEAFTWQAGPKVWQRRKRRITQIGRIVTAHPAEGERYYLRVLLTHVTGATSFEHLRTVD 1023
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
SSFRE+A GL++A N L+ CL
Sbjct: 1024 GEVCSSFREAAEQRGLIEADNTLDECL 1050
>gb|AAP52492.2| hypothetical protein LOC_Os10g10730 [Oryza sativa Japonica Group]
Length = 1416
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV-VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPE F W + W RRKR + RIVT + H+ G SFE L+ V+
Sbjct: 777 FPEAFTWQAGPKVWQRRKRRITQIGRIVTAHPAEGERYYLRVLLTHVTGATSFEHLRTVD 836
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
SSFRE+A GL++A N L+ CL
Sbjct: 837 GEVCSSFREAAEKRGLIEADNTLDECL 863
>gb|AAP52578.2| hypothetical protein LOC_Os10g11620 [Oryza sativa Japonica Group]
Length = 1416
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV-VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPE F W + W RRKR + RIVT + H+ G SFE L+ V+
Sbjct: 777 FPEAFTWQAGPKVWQRRKRRITQIGRIVTAHPAEGERYYLRVLLTHVTGATSFEHLRTVD 836
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
SSFRE+A GL++A N L+ CL
Sbjct: 837 GEVCSSFREAAEQRGLIEADNTLDECL 863
>gb|AAN09850.1| putative helicase, 3'-partial [Oryza sativa Japonica Group]
Length = 1415
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV-VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPE F W + W RRKR + RIVT + H+ G SFE L+ V+
Sbjct: 777 FPEAFTWQAGPKVWQRRKRRITQIGRIVTAHPAEGERYYLRVLLTHVTGATSFEHLRTVD 836
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
SSFRE+A GL++A N L+ CL
Sbjct: 837 GEVCSSFREAAEQRGLIEADNTLDECL 863
>ref|XP_004509812.1| PREDICTED: ATP-dependent helicase RRM3-like [Cicer arietinum]
Length = 927
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/87 (32%), Positives = 44/87 (50%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVNN 181
FP +VWNK + WTRRK G V RI + N ++G RSFE++K VN
Sbjct: 199 FPTKYVWNKTSKKWTRRKNGRCVGRIYYVPPTSGEKFYLRMLLNKVRGSRSFEDIKTVNG 258
Query: 182 VSASSFRESALLHGLLKAYNNLELCLE 262
+++++ GLL+ + C++
Sbjct: 259 FVHLTYKDACYALGLLEDDKEFDDCIK 285
>gb|EEE56994.1| hypothetical protein OsJ_06737 [Oryza sativa Japonica Group]
Length = 384
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/86 (37%), Positives = 43/86 (50%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVNN 181
FP F W + W +R RG V RIV + NH+ G SFE+L+ V+
Sbjct: 293 FPMWFTWQTPGKYWKKRDRGGQVGRIVCAHPAEGERYYLRVLLNHLAGSTSFEDLRTVDG 352
Query: 182 VSASSFRESALLHGLLKAYNNLELCL 259
V SFR +A GL++A N L+ CL
Sbjct: 353 VLMPSFRAAAERRGLIEADNTLDECL 378
>ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [Sorghum bicolor]
gi|241945599|gb|EES18744.1| hypothetical protein
SORBIDRAFT_09g029620 [Sorghum bicolor]
Length = 1108
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV--VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFV 175
FPE + WN + + W RK+ V + R+V + NH+ G RS+EEL+ V
Sbjct: 429 FPEKYTWNTRYKLWQTRKQKTVYQIGRLVAAHPAEGERYYLRVLLNHVPGARSYEELRTV 488
Query: 176 NNVSASSFRESALLHGLLKAYNNLELCL 259
+ +FR++A GL++A N ++ C+
Sbjct: 489 DGQVMPTFRDAAEKRGLIEADNTIDECM 516
>emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa Japonica Group]
gi|38346440|emb|CAE04434.2| OSJNBa0018J19.1 [Oryza sativa
Japonica Group] gi|116309570|emb|CAH66630.1|
OSIGBa0105P02.4 [Oryza sativa Indica Group]
Length = 1746
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +2
Query: 2 FPEHFVWN--KKLEAWTRRKRGHV--VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELK 169
FPEH W KK + W +RKR + V R+V + NH+ G +E+L+
Sbjct: 1178 FPEHHTWQTGKKKKFWQKRKRSAILQVGRMVLAHPTEGERYYLRVLLNHVTGATCYEDLR 1237
Query: 170 FVNNVSASSFRESALLHGLLKAYNNLELCL 259
V+ SFRE+A GL++A N LE CL
Sbjct: 1238 TVDGKILPSFREAAERRGLIEADNTLEECL 1267
>gb|AAO34493.1| putative helicase [Oryza sativa Japonica Group]
Length = 1629
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/86 (36%), Positives = 42/86 (48%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVNN 181
FP F W + W +R RG V RIV + NH+ G SFE+L+ V+
Sbjct: 969 FPMWFTWQTAGKYWKKRDRGGQVGRIVCAHPAEGERYYLRVLLNHVAGSTSFEDLRTVDG 1028
Query: 182 VSASSFRESALLHGLLKAYNNLELCL 259
V SFR + GL++A N L+ CL
Sbjct: 1029 VVMPSFRAATERRGLIEADNTLDECL 1054
>gb|EEE60808.1| hypothetical protein OsJ_14407 [Oryza sativa Japonica Group]
Length = 1326
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +2
Query: 2 FPEHFVWN--KKLEAWTRRKRGHV--VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELK 169
FPEH W KK + W +RKR + V R+V + NH+ G +E+L+
Sbjct: 1084 FPEHHTWQTGKKKKFWQKRKRSAILQVGRMVLAHPTEGERYYLRVLLNHVTGATCYEDLR 1143
Query: 170 FVNNVSASSFRESALLHGLLKAYNNLELCL 259
V+ SFRE+A GL++A N LE CL
Sbjct: 1144 TVDGKILPSFREAAERRGLIEADNTLEECL 1173
>gb|EEE59513.1| hypothetical protein OsJ_11765 [Oryza sativa Japonica Group]
Length = 1227
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/86 (36%), Positives = 42/86 (48%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVNN 181
FP F W + W +R RG V RIV + NH+ G SFE+L+ V+
Sbjct: 939 FPMWFTWQTAGKYWKKRDRGGQVGRIVCAHPAEGERYYLRVLLNHVAGSTSFEDLRTVDG 998
Query: 182 VSASSFRESALLHGLLKAYNNLELCL 259
V SFR + GL++A N L+ CL
Sbjct: 999 VVMPSFRAATERRGLIEADNTLDECL 1024
>gb|ABF97674.1| expressed protein [Oryza sativa Japonica Group]
Length = 1628
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/86 (36%), Positives = 42/86 (48%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVNN 181
FP F W + W +R RG V RIV + NH+ G SFE+L+ V+
Sbjct: 995 FPMWFTWQTAGKYWKKRDRGGQVGRIVCAHPAEGERYYLRVLLNHVAGSTSFEDLRTVDG 1054
Query: 182 VSASSFRESALLHGLLKAYNNLELCL 259
V SFR + GL++A N L+ CL
Sbjct: 1055 VVMPSFRAATERRGLIEADNTLDECL 1080
>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
gi|241946122|gb|EES19267.1| hypothetical protein
SORBIDRAFT_09g008040 [Sorghum bicolor]
Length = 1679
Score = 56.6 bits (135), Expect = 4e-06
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV-VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPEH+ W + W RRK + RIV N NH++G SFE+L+ V
Sbjct: 1018 FPEHYRWITGKKMWQRRKIASAQIGRIVYANPAEGERYFLRVLLNHVRGATSFEDLRTVA 1077
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
V+ S+FRE+ GL++ +++ CL
Sbjct: 1078 GVTYSTFREACEKRGLIETDRSIDDCL 1104
>ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [Sorghum bicolor]
gi|241921048|gb|EER94192.1| hypothetical protein
SORBIDRAFT_01g021220 [Sorghum bicolor]
Length = 1439
Score = 56.6 bits (135), Expect = 4e-06
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHV-VARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPEH+ W + W RRK + RIV N NH++G SFE+L+ V
Sbjct: 1019 FPEHYRWITGKKMWQRRKIASAQIGRIVYANPAEGERYFLRVLLNHVRGATSFEDLRTVA 1078
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
V+ S+FRE+ GL++ +++ CL
Sbjct: 1079 GVTYSTFREACEKRGLIETDRSIDDCL 1105
>ref|XP_002459026.1| hypothetical protein SORBIDRAFT_03g044710 [Sorghum bicolor]
gi|241931001|gb|EES04146.1| hypothetical protein
SORBIDRAFT_03g044710 [Sorghum bicolor]
Length = 802
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRG-HVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPEHF W + W +RK V R+++ + N++ G S+E L+ V+
Sbjct: 102 FPEHFTWQSDGKFWQKRKNSVFQVGRVISAHPAEGERYFLRVLLNNVAGATSYEHLRTVD 161
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
+ SFRE+A GL++ N L+ CL
Sbjct: 162 GILLPSFREAAERRGLIEEDNTLDECL 188
>ref|XP_002467434.1| hypothetical protein SORBIDRAFT_01g028040 [Sorghum bicolor]
gi|241921288|gb|EER94432.1| hypothetical protein
SORBIDRAFT_01g028040 [Sorghum bicolor]
Length = 804
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRG-HVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVN 178
FPEHF W + W +RK V R+++ + N++ G S+E L+ V+
Sbjct: 209 FPEHFTWQSDGKFWQKRKNSVFQVGRVISAHPVEGERYFLRVLLNNVAGATSYEHLRTVD 268
Query: 179 NVSASSFRESALLHGLLKAYNNLELCL 259
+ SFRE+A GL++ N L+ CL
Sbjct: 269 GILLPSFREAAERRGLIEEDNTLDECL 295
>ref|XP_002464527.1| hypothetical protein SORBIDRAFT_01g020130 [Sorghum bicolor]
gi|241918381|gb|EER91525.1| hypothetical protein
SORBIDRAFT_01g020130 [Sorghum bicolor]
Length = 1318
Score = 55.5 bits (132), Expect = 8e-06
Identities = 27/76 (35%), Positives = 39/76 (51%)
Frame = +2
Query: 2 FPEHFVWNKKLEAWTRRKRGHVVARIVTINXXXXXXXXXXXXXNHIKGCRSFEELKFVNN 181
FP + W+ K + WTRRKRG+ + RI + N KGC SFE+++ VN
Sbjct: 635 FPTKWTWHAKEKQWTRRKRGNKIGRIYNAHPVSGERYYLRMLLNTAKGCTSFEDIRTVNG 694
Query: 182 VSASSFRESALLHGLL 229
V SS++ + G L
Sbjct: 695 VVHSSYKSACHALGFL 710