BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00053183
         (349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB72467.1| putative protein [Arabidopsis thaliana]                70   4e-15
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                71   7e-15
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    68   3e-14
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            60   1e-11
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    73   5e-11
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              72   6e-11
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    72   8e-11
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    71   2e-10
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    71   2e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    70   3e-10
gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thali...    58   4e-10
gb|ABK28140.1| unknown [Arabidopsis thaliana]                          58   4e-10
gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thali...    58   4e-10
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...    54   9e-10
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    68   1e-09
gb|AAD15328.1| hypothetical protein [Arabidopsis thaliana] gi|72...    68   1e-09
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]                          67   3e-09
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    67   3e-09
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    52   4e-09
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    56   4e-09

>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 69.7 bits (169), Expect(2) = 4e-15
 Identities = 28/60 (46%), Positives = 37/60 (61%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + W+ +CKP+ EGGLG R +KE N    LKLVW +++  +SLWVKWV    L     W V
Sbjct: 413 ISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIV 472



 Score = 37.0 bits (84), Expect(2) = 4e-15
 Identities = 20/44 (45%), Positives = 24/44 (54%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSGNFLEKK 212
           LI  +  SS  +WL  F LP   I+ IE L +SFL SG  L  K
Sbjct: 366 LISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSK 409


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 71.2 bits (173), Expect(2) = 7e-15
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
 Frame = -3

Query: 242 SIVWEFFRKEIHFLK--WDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVK 69
           S +W       H  K  WD +CKP+ EGGLG R +KE N    LKLVW ++++  SLW K
Sbjct: 492 SFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTK 551

Query: 68  WVHRKFLIHHSLWTV 24
           WV    +   S+W++
Sbjct: 552 WVAEYLIRKKSIWSL 566



 Score = 34.7 bits (78), Expect(2) = 7e-15
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSGN 227
           LIK V  S   +WL  F LP + I+ I+ L +SFL SG+
Sbjct: 460 LIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGS 498


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 68.2 bits (165), Expect(2) = 3e-14
 Identities = 24/60 (40%), Positives = 43/60 (71%)
 Frame = -3

Query: 203  LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
            + W  +CK ++EGGLG + +KE N   +LKL+W ++++++SLWVKWV++  +   + W+V
Sbjct: 1007 IAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSV 1066



 Score = 35.4 bits (80), Expect(2) = 3e-14
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -1

Query: 343  LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSGNFLEKK 212
            LIK V  S   +WL +F LP   ++ IE + ++FL SG  L  K
Sbjct: 960  LIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTK 1003


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 60.1 bits (144), Expect(2) = 1e-11
 Identities = 25/58 (43%), Positives = 37/58 (63%)
 Frame = -3

Query: 197 WDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           W  +C P+ EGGLG R +KE N   +LKL+W +++S  SLWV+W+    L   S W++
Sbjct: 118 WSDVCTPKDEGGLGIRSLKEANKVSLLKLIWRMLSS-TSLWVQWLRLYLLRKGSFWSI 174



 Score = 34.7 bits (78), Expect(2) = 1e-11
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSGNFLEKK 212
           LI  V  S   +W+  F LP   IK I+S+ +SFL SG  L  K
Sbjct: 69  LISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTK 112


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + W  +CKP+ EGGLG R +KE N    LKL+W +++  +SLWVKW+H   L   S W V
Sbjct: 242 IAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAV 301


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 27/58 (46%), Positives = 39/58 (67%)
 Frame = -3

Query: 197 WDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           W  +CKP++EGGLG R +KE N    LKL+W +V+   SLWV+W+ +  L H + W+V
Sbjct: 389 WGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSV 446


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 977

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + WD +CKP+KEGGLG R +KE N    LK+VW +V+   SLWVKW+ +  L + + W V
Sbjct: 817 VSWDDVCKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFV 876


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + WD ICKP++EGGLG R + E N   +LKL+W V ++ +SLWVKW     L   S W++
Sbjct: 265 VSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSL 324

Query: 23  -PN 18
            PN
Sbjct: 325 TPN 327


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 27/60 (45%), Positives = 40/60 (66%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + WD ICKP+KEGGLG + ++E N    LKL+W +++ ++SLWVKW     L   S W++
Sbjct: 581 VSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSI 640


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/60 (50%), Positives = 38/60 (63%)
 Frame = -3

Query: 203  LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
            + W  +CKP+ EGGLG R +KE N    LKLVW +V+   SLWVKWV +  L + S W V
Sbjct: 860  ISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEV 919


>gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score = 58.2 bits (139), Expect(2) = 4e-10
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + W  +C P  EGGLG R +KE N    LKL+W ++ S+ SLW +WV    +  ++ W +
Sbjct: 105 IAWSKVCLPMCEGGLGLRPLKEINTVCGLKLIWRLLASQTSLWGQWVQTYLIRRNNFWAI 164



 Score = 31.6 bits (70), Expect(2) = 4e-10
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSG 230
           LIK V  S   +W   F LP   +K IE L ++FL SG
Sbjct: 58  LIKSVLMSITNFWSSAFRLPGNCMKEIERLCSAFLWSG 95


>gb|ABK28140.1| unknown [Arabidopsis thaliana]
          Length = 349

 Score = 58.2 bits (139), Expect(2) = 4e-10
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + W  +C P  EGGLG R +KE N    LKL+W ++ S+ SLW +WV    +  ++ W +
Sbjct: 84  IAWSKVCLPMCEGGLGLRPLKEINTVCGLKLIWRLLASQTSLWGQWVQTYLIRRNNFWAI 143



 Score = 31.6 bits (70), Expect(2) = 4e-10
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSG 230
           LIK V  S   +W   F LP   +K IE L ++FL SG
Sbjct: 37  LIKSVLMSITNFWSSAFRLPGNCMKEIERLCSAFLWSG 74


>gb|ABE65398.1| hypothetical protein At1g43570 [Arabidopsis thaliana]
          Length = 348

 Score = 58.2 bits (139), Expect(2) = 4e-10
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + W  +C P  EGGLG R +KE N    LKL+W ++ S+ SLW +WV    +  ++ W +
Sbjct: 84  IAWSKVCLPMCEGGLGLRPLKEINTVCGLKLIWRLLASQTSLWGQWVQTYLIRRNNFWAI 143



 Score = 31.6 bits (70), Expect(2) = 4e-10
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSG 230
           LIK V  S   +W   F LP   +K IE L ++FL SG
Sbjct: 37  LIKSVLMSITNFWSSAFRLPGNCMKEIERLCSAFLWSG 74


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score = 53.9 bits (128), Expect(2) = 9e-10
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
 Frame = -3

Query: 242 SIVW----EFFRKEIHFLKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLW 75
           S +W    E  RK +  + W  +CKP + GGL    ++ +N   +LK +W + + +++LW
Sbjct: 319 SFIWSGSAEVKRKSL--VAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLW 376

Query: 74  VKWVHRKFL 48
           VKW+H  FL
Sbjct: 377 VKWIHAYFL 385



 Score = 34.7 bits (78), Expect(2) = 9e-10
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSGN 227
           L++ +  +   YW+ +F +P K I+ I+S+  SF+ SG+
Sbjct: 287 LVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGS 325


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + W  +CKP++EGGLG R +KE N    LKL+W +++  +SLWVKW+    L   S W V
Sbjct: 109 ITWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFWAV 168


>gb|AAD15328.1| hypothetical protein [Arabidopsis thaliana]
           gi|7270695|emb|CAB77857.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 174

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 23/66 (34%), Positives = 43/66 (65%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + W  +CKP++E GLG + ++E N    L+L+W + ++K SLWV+W+++  +   +LW+V
Sbjct: 105 ISWLEVCKPKRERGLGLKSLRELNEVSTLQLIWRIFSAKNSLWVQWIYKNLIRKGTLWSV 164

Query: 23  PNRMDC 6
            +   C
Sbjct: 165 KDNTSC 170


>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
          Length = 382

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           L W  +CKP++EGGLG R +KE N    LKL+W +V+   SLWV+W+ +  L   + W+V
Sbjct: 277 LSWVDVCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEKYLLKADTFWSV 336


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 24/59 (40%), Positives = 41/59 (69%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWT 27
           + W+++C+P++EGGLG + IKE N    LKL+W +V+  +SLWV+W+    L  ++ W+
Sbjct: 378 IAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWS 436


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 52.0 bits (123), Expect(2) = 4e-09
 Identities = 22/59 (37%), Positives = 39/59 (66%)
 Frame = -3

Query: 218  KEIHFLKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIH 42
            +++H+L W+ +CKP+  GG+GF+ +  FN A + K VW ++ +KESL  + +  K+  H
Sbjct: 841  RKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYYPH 899



 Score = 34.3 bits (77), Expect(2) = 4e-09
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSGNFLEKK 212
           LIK V Q+   Y +G++ LP   I+ I S MA F   G   E+K
Sbjct: 799 LIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERK 842


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 55.8 bits (133), Expect(2) = 4e-09
 Identities = 24/60 (40%), Positives = 32/60 (53%)
 Frame = -3

Query: 203 LKWDSICKPQKEGGLGFRGIKEFNGAGILKLVWWVVTSKESLWVKWVHRKFLIHHSLWTV 24
           + W   C P+ EGGLGFR   E+N   +L+L+W +     SLW +W     L H S W V
Sbjct: 713 VSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQV 772



 Score = 30.4 bits (67), Expect(2) = 4e-09
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -1

Query: 343 LIKVVFQSSYVYWLGIFSLPYKTIKVIESLMASFLLSGNFLEKK 212
           LI  V      +W+  F LP   IK IESL + FL +G+   +K
Sbjct: 666 LISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRK 709