BLASTX nr result
ID: Cocculus23_contig00053104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00053104
(405 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15973.3| unnamed protein product [Vitis vinifera] 202 5e-50
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 202 5e-50
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 200 2e-49
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,... 199 3e-49
ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prun... 197 1e-48
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis] 193 2e-47
ref|XP_007016122.1| Tetratricopeptide repeat (TPR)-like superfam... 190 2e-46
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr... 188 8e-46
ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containi... 186 3e-45
ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Caps... 184 8e-45
ref|XP_002314110.1| pentatricopeptide repeat-containing family p... 184 8e-45
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]... 184 1e-44
ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containi... 182 4e-44
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi... 182 4e-44
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi... 181 9e-44
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr... 181 9e-44
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi... 181 9e-44
gb|AFN53666.1| hypothetical protein [Linum usitatissimum] 180 2e-43
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp.... 180 2e-43
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi... 164 2e-38
>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 202 bits (513), Expect = 5e-50
Identities = 97/134 (72%), Positives = 108/134 (80%)
Frame = -3
Query: 403 PSLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFV 224
PSLDYA++VFDQ+P PNLY WNTLIRAYASS +P QSLLIFL M+H PD P+KFTFPF+
Sbjct: 83 PSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFL 142
Query: 223 IKAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDV 44
IKAASEL L G FHGM +K L SDVFILNSLIH YA CG+L L Y++F IP RDV
Sbjct: 143 IKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDV 202
Query: 43 VSWNSMITAFVQAG 2
VSWNSMITAFVQ G
Sbjct: 203 VSWNSMITAFVQGG 216
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/131 (25%), Positives = 53/131 (40%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D A+ +FD MP ++ WN LI AY P ++L +F + P++ T
Sbjct: 282 DAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVT------- 334
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
+K + + + SLI Y CGDL A +F + +DV W
Sbjct: 335 -----------------LKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVW 377
Query: 34 NSMITAFVQAG 2
++MI G
Sbjct: 378 SAMIAGLAMHG 388
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 202 bits (513), Expect = 5e-50
Identities = 97/134 (72%), Positives = 108/134 (80%)
Frame = -3
Query: 403 PSLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFV 224
PSLDYA++VFDQ+P PNLY WNTLIRAYASS +P QSLLIFL M+H PD P+KFTFPF+
Sbjct: 83 PSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFL 142
Query: 223 IKAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDV 44
IKAASEL L G FHGM +K L SDVFILNSLIH YA CG+L L Y++F IP RDV
Sbjct: 143 IKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDV 202
Query: 43 VSWNSMITAFVQAG 2
VSWNSMITAFVQ G
Sbjct: 203 VSWNSMITAFVQGG 216
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/131 (29%), Positives = 62/131 (47%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D A+ +FD MP ++ WN LI AY P ++L +F + P++ T + A
Sbjct: 320 DAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSA 379
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
++L A+ +G H K + + + SLI Y CGDL A +F + +DV W
Sbjct: 380 CAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVW 439
Query: 34 NSMITAFVQAG 2
++MI G
Sbjct: 440 SAMIAGLAMHG 450
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/127 (26%), Positives = 66/127 (51%)
Frame = -3
Query: 382 KVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKAASEL 203
+VF +P+ ++ WN++I A+ P ++L +F M PN T V+ A ++
Sbjct: 192 RVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM-ETQNVKPNGITMVGVLSACAKK 250
Query: 202 SALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSWNSMI 23
S G H + + + + N+++ Y CG ++ A ++F K+PE+D+VSW +M+
Sbjct: 251 SDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTML 310
Query: 22 TAFVQAG 2
+ + G
Sbjct: 311 VGYAKIG 317
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 200 bits (508), Expect = 2e-49
Identities = 96/134 (71%), Positives = 107/134 (79%)
Frame = -3
Query: 403 PSLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFV 224
PSLDYA++VFDQ+P PNLY WNTLIRAYASS +P QSLLIFL M+H PD P+KFTFPF+
Sbjct: 83 PSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFL 142
Query: 223 IKAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDV 44
IKAASEL L G FHGM +K L SDVFILNSLIH YA CG+L L Y++F P RDV
Sbjct: 143 IKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDV 202
Query: 43 VSWNSMITAFVQAG 2
VSWNSMITAFVQ G
Sbjct: 203 VSWNSMITAFVQGG 216
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/127 (26%), Positives = 65/127 (51%)
Frame = -3
Query: 382 KVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKAASEL 203
+VF P+ ++ WN++I A+ P ++L +F M PN T V+ A ++
Sbjct: 192 RVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEM-ETQNVKPNGITMVGVLSACAKK 250
Query: 202 SALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSWNSMI 23
S G H + + + + N+++ Y CG ++ A ++F K+PE+D+VSW +M+
Sbjct: 251 SDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTML 310
Query: 22 TAFVQAG 2
+ + G
Sbjct: 311 VGYAKIG 317
>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 765
Score = 199 bits (507), Expect = 3e-49
Identities = 93/133 (69%), Positives = 111/133 (83%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SLDYARKVF+++ QPNLY WNTLIRA+ASSP+P+ SLLIF+ M++D PD PNKFTFPFVI
Sbjct: 80 SLDYARKVFEEISQPNLYTWNTLIRAFASSPEPIHSLLIFIRMLYDSPDFPNKFTFPFVI 139
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAA+ +++L HGMA+KASL SD+FILNSLIHCYA+CGDLD AY +F KI E+DVV
Sbjct: 140 KAAAGVASLPFSQAIHGMAIKASLGSDLFILNSLIHCYASCGDLDSAYSVFVKIEEKDVV 199
Query: 40 SWNSMITAFVQAG 2
SWNSMI FV G
Sbjct: 200 SWNSMIKGFVLGG 212
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/131 (32%), Positives = 65/131 (49%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D AR VFD MP+ ++ WN LI AY P ++L IF + P++ T + A
Sbjct: 316 DAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTLSA 375
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
++L A+ +G H K + + + SLI Y+ CG+++ A IF + RDV W
Sbjct: 376 CAQLGAIDIGGWIHVYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDVFVW 435
Query: 34 NSMITAFVQAG 2
++MI G
Sbjct: 436 SAMIAGLAMHG 446
>ref|XP_007206426.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
gi|462402068|gb|EMJ07625.1| hypothetical protein
PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 197 bits (501), Expect = 1e-48
Identities = 90/131 (68%), Positives = 112/131 (85%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SLDYAR+VFDQ+PQPN+Y WNTLIRAYASS DP +S+L+FL+M+ C + P+K+T+PF I
Sbjct: 79 SLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPAESILVFLDMLDHCSECPDKYTYPFAI 138
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAASEL AL+VG FHGMA+KASL SD++ILNSL+H Y +CGDLDLA ++F K P++DVV
Sbjct: 139 KAASELRALQVGRGFHGMAIKASLGSDIYILNSLVHFYGSCGDLDLARRVFMKTPKKDVV 198
Query: 40 SWNSMITAFVQ 8
SWNSMIT F Q
Sbjct: 199 SWNSMITVFAQ 209
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/129 (31%), Positives = 64/129 (49%)
Frame = -3
Query: 388 ARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKAAS 209
A +VF MP ++ WN LI +Y S P ++L +F + P++ T + A +
Sbjct: 317 AWRVFAAMPSQDIAAWNVLISSYEQSGKPKEALAVFNELQKSKSPKPDEVTLVSTLAACA 376
Query: 208 ELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSWNS 29
+L A+ +G H K + + + SLI YA CGDLD A ++F + RDV W++
Sbjct: 377 QLGAIDLGGWIHVYIKKQVMKLNCHLTTSLIDMYAKCGDLDKALEVFNSVERRDVFVWSA 436
Query: 28 MITAFVQAG 2
MI G
Sbjct: 437 MIAGLAMHG 445
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/132 (28%), Positives = 71/132 (53%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
LD AR+VF + P+ ++ WN++I +A P ++L +F M + P N T V+
Sbjct: 182 LDLARRVFMKTPKKDVVSWNSMITVFAQGNCPQEALELFKEMEAENVKP-NDVTMVSVLS 240
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A ++ L G + + ++ + N+++ Y CG +D A ++F ++PE+D+VS
Sbjct: 241 ACAKKVDLEFGRWVCSHIQRNEIKENLTLNNAMLDMYVKCGSVDDAKRLFDRMPEKDIVS 300
Query: 37 WNSMITAFVQAG 2
W +M+ + Q G
Sbjct: 301 WTTMLDGYAQLG 312
>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
Length = 739
Score = 193 bits (490), Expect = 2e-47
Identities = 88/131 (67%), Positives = 109/131 (83%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SLDYA +VFDQ+P+PNLY WNT+IRAYASS DP+QS+++FL M+ C + PNK+T+PFV+
Sbjct: 80 SLDYAHQVFDQIPKPNLYTWNTIIRAYASSSDPIQSIVVFLRMLDQCCESPNKYTYPFVL 139
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAASEL A RVG FHGM +K+SL SDVFILNSL+H Y +C DLD AY++F IP +DVV
Sbjct: 140 KAASELKASRVGRGFHGMVMKSSLASDVFILNSLVHFYGSCDDLDSAYRVFLNIPSKDVV 199
Query: 40 SWNSMITAFVQ 8
SWNSMI AFV+
Sbjct: 200 SWNSMIKAFVE 210
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/131 (29%), Positives = 65/131 (49%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D A +VF+ MP ++ WN LI +Y + P ++L +F + P++ T + A
Sbjct: 316 DEALRVFEAMPNQDIAAWNVLISSYEQNGMPKEALSVFHKLQVSKSAKPDEVTLVSSLSA 375
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
S+L ++ G H + + + + SLI YA CGDL+ A ++F + +DV W
Sbjct: 376 CSQLGSIDPGRWIHIYIKRQGIKLNCHLTTSLIDMYAKCGDLEKALEVFDSVERKDVYVW 435
Query: 34 NSMITAFVQAG 2
++MI G
Sbjct: 436 SAMIAGLAMHG 446
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/132 (27%), Positives = 69/132 (52%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
LD A +VF +P ++ WN++I+A+ P ++ +F M + P N T V+
Sbjct: 183 LDSAYRVFLNIPSKDVVSWNSMIKAFVEGDCPDEAFQLFREMEMENLKP-NDITMVGVLC 241
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A + + + G + + ++ + N+++ Y CG ++ A ++F K+PERDVVS
Sbjct: 242 ACGKKADIEFGRWLCSYIQRNGIAVNLTLNNAMLDMYVKCGSVEDAKELFDKMPERDVVS 301
Query: 37 WNSMITAFVQAG 2
W +M+ + + G
Sbjct: 302 WTTMLDGYTRMG 313
>ref|XP_007016122.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508786485|gb|EOY33741.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 733
Score = 190 bits (483), Expect = 2e-46
Identities = 89/133 (66%), Positives = 106/133 (79%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SLDYARKVFDQ+P+PNLY WNTLIR YAS P+PLQ +LIFL M+ + P PNKFTFPFVI
Sbjct: 74 SLDYARKVFDQIPKPNLYTWNTLIRVYASGPEPLQGILIFLRMVDESPYYPNKFTFPFVI 133
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAA+E+ ++ VG HGM +KASL +DVFI NSLIH Y +CGDLD AY++F I E+DVV
Sbjct: 134 KAAAEIVSVCVGQALHGMVIKASLGADVFISNSLIHLYLSCGDLDSAYRVFMMIGEKDVV 193
Query: 40 SWNSMITAFVQAG 2
SWNS+IT Q G
Sbjct: 194 SWNSLITGLAQKG 206
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/129 (28%), Positives = 65/129 (50%)
Frame = -3
Query: 388 ARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKAAS 209
AR+V D MP+ ++ WN LI Y + P ++L I+ + P++ T + A +
Sbjct: 312 ARRVLDIMPRQDIAAWNALISGYEQNGKPKEALAIYHELKLSKIAKPDEITLVSTLSACA 371
Query: 208 ELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSWNS 29
+L A+ +G H + + + + SLI Y+ CGD++ A ++F + RDV W++
Sbjct: 372 QLGAMDIGRGIHAYVKEQGIQLNCHLTTSLIDMYSKCGDVNKALEVFYSVERRDVFVWSA 431
Query: 28 MITAFVQAG 2
MI G
Sbjct: 432 MIAGLAMHG 440
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/132 (25%), Positives = 66/132 (50%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
LD A +VF + + ++ WN+LI A ++L +F M + P N T V+
Sbjct: 177 LDSAYRVFMMIGEKDVVSWNSLITGLAQKGCAEKALELFRRMDAESVKP-NDVTMVGVLS 235
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A ++ L G + + ++ + N+++ YA CG L+ A ++F + E+D+V+
Sbjct: 236 ACTKKLDLEFGRWVCSYIERNGISVNLTLSNAMLDMYAKCGSLEDAKRLFDMMEEKDIVT 295
Query: 37 WNSMITAFVQAG 2
W +M+ + + G
Sbjct: 296 WTTMLDGYAKLG 307
>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
gi|557111205|gb|ESQ51489.1| hypothetical protein
EUTSA_v10016305mg [Eutrema salsugineum]
Length = 739
Score = 188 bits (477), Expect = 8e-46
Identities = 88/133 (66%), Positives = 108/133 (81%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SLDYA KVFDQ+PQPN + WNTLIRAYAS PDPL+S+ +FL+M+ + PN +TFPF+I
Sbjct: 80 SLDYACKVFDQIPQPNSFTWNTLIRAYASGPDPLRSICVFLDMVSESQCYPNTYTFPFLI 139
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAA+E+S+L +G HGMAVK+S+ DVF+ NSLIHCY +CGDLD A K+FT I E+DVV
Sbjct: 140 KAAAEVSSLSLGQSLHGMAVKSSVGCDVFVANSLIHCYFSCGDLDSACKVFTTIQEKDVV 199
Query: 40 SWNSMITAFVQAG 2
SWNSMIT FVQ G
Sbjct: 200 SWNSMITGFVQKG 212
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/129 (31%), Positives = 69/129 (53%)
Frame = -3
Query: 388 ARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKAAS 209
AR V + MP+ ++ WN LI AY + P ++LL+F + N+ T + A +
Sbjct: 318 ARDVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACA 377
Query: 208 ELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSWNS 29
++ AL +G H K + S+ ++ ++LIH Y+ CGDL A ++F + +RDV W++
Sbjct: 378 QVGALELGRWIHSYIKKHGIRSNFYVTSALIHMYSKCGDLVKAREVFNTVEKRDVFVWSA 437
Query: 28 MITAFVQAG 2
MI G
Sbjct: 438 MIGGLAMHG 446
>ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1049
Score = 186 bits (472), Expect = 3e-45
Identities = 86/131 (65%), Positives = 109/131 (83%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SLDYAR+VFD++P+PNL+ WN LIRAYASSPDP++S+ IFL M+ +C + PNKFTFPF++
Sbjct: 135 SLDYARQVFDEIPEPNLFTWNALIRAYASSPDPVESIRIFLQMLDECNECPNKFTFPFLL 194
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAASEL A ++G FHGM VKA L SDV+I+NSLIH Y +CG+LDLA +F K ++DVV
Sbjct: 195 KAASELRASKIGRGFHGMVVKAELGSDVYIVNSLIHFYGSCGELDLARLVFLKSYKKDVV 254
Query: 40 SWNSMITAFVQ 8
SWNS+ITAF Q
Sbjct: 255 SWNSVITAFAQ 265
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/131 (32%), Positives = 67/131 (51%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D AR+VF MP ++ WN LI +Y + P ++L +F + + P++ T + A
Sbjct: 371 DEARRVFGTMPSQDIATWNVLISSYEQNGKPKEALAVFHELQKNKGPKPDEVTLVSTLAA 430
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
S+L A+ +G H K + + + SLI YA CG+L+ A ++F RDV W
Sbjct: 431 CSQLGAIDLGGWIHVYVKKQGMKLNCHLTTSLIDMYAKCGNLEKALEVFNSAETRDVFVW 490
Query: 34 NSMITAFVQAG 2
++MI A G
Sbjct: 491 SAMIAALAMHG 501
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/132 (28%), Positives = 73/132 (55%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
LD AR VF + + ++ WN++I A+A P +L +F M + P N T V+
Sbjct: 238 LDLARLVFLKSYKKDVVSWNSVITAFAQGNCPEVALELFKEMEAENMKP-NDVTLVSVLS 296
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A ++++ L G + ++ ++ + N+++ YA CG ++ A ++F ++PE+DVVS
Sbjct: 297 ACAKMADLEFGRWVCSHVERHGVEENLTLNNAMLDMYAKCGSVEDAERLFGRMPEKDVVS 356
Query: 37 WNSMITAFVQAG 2
W +M+ + + G
Sbjct: 357 WTTMLDGYARMG 368
>ref|XP_006293749.1| hypothetical protein CARUB_v10022711mg [Capsella rubella]
gi|482562457|gb|EOA26647.1| hypothetical protein
CARUB_v10022711mg [Capsella rubella]
Length = 739
Score = 184 bits (468), Expect = 8e-45
Identities = 83/133 (62%), Positives = 109/133 (81%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SL+YARKVFD++PQPN + WNTLIRAYAS PDP++S+ IFL+M+ + PNK+TFPF++
Sbjct: 80 SLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVRSIWIFLDMVSESQCYPNKYTFPFLV 139
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAA+E+S+L +G HGMA+K+++ D+F+ NSLIHCY +CGDLD A K+FT I E+DVV
Sbjct: 140 KAAAEVSSLSLGQSLHGMAIKSAVGCDLFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 199
Query: 40 SWNSMITAFVQAG 2
SWNSMI FVQ G
Sbjct: 200 SWNSMINGFVQKG 212
Score = 83.6 bits (205), Expect = 3e-14
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = -3
Query: 400 SLDY--ARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPF 227
S DY AR+V + MP+ ++ WN LI AY + P ++LL+F + N+ T
Sbjct: 312 SEDYEAAREVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVS 371
Query: 226 VIKAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERD 47
+ A +++ AL +G H K + + +I ++LIH Y+ CGDL+ A ++F + +RD
Sbjct: 372 TLSACAQVGALELGRWIHSYIKKHGIRMNFYITSALIHMYSKCGDLEKAREVFNCVEKRD 431
Query: 46 VVSWNSMITAFVQAG 2
V W++MI G
Sbjct: 432 VFVWSAMIGGLAMHG 446
>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222850518|gb|EEE88065.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 738
Score = 184 bits (468), Expect = 8e-45
Identities = 86/133 (64%), Positives = 107/133 (80%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SLDYA KVFDQ+P+PNLY WNTLIRA+ASSP P+Q LL+F+ M+H+ PN +TFPFVI
Sbjct: 79 SLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVI 138
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAA+E+S+L G HGM +KAS SD+FI NSLIH Y++ GDLD AY +F+KI E+D+V
Sbjct: 139 KAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIV 198
Query: 40 SWNSMITAFVQAG 2
SWNSMI+ FVQ G
Sbjct: 199 SWNSMISGFVQGG 211
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/131 (32%), Positives = 68/131 (51%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D AR+VFD MP+ ++ WN LI +Y + P ++L IF + + PN+ T + A
Sbjct: 315 DAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAA 374
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
++L A+ +G H K + + I SLI Y+ CG L+ A ++F + RDV W
Sbjct: 375 CAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVW 434
Query: 34 NSMITAFVQAG 2
++MI G
Sbjct: 435 SAMIAGLAMHG 445
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/132 (27%), Positives = 69/132 (52%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
LD A VF ++ + ++ WN++I + P ++L +F M + P N+ T V+
Sbjct: 182 LDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARP-NRVTMVGVLS 240
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A ++ L G + +D ++ + N+++ Y CG L+ A ++F K+ E+D+VS
Sbjct: 241 ACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVS 300
Query: 37 WNSMITAFVQAG 2
W +MI + + G
Sbjct: 301 WTTMIDGYAKVG 312
>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein
[Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
editing factor OTP81 [Arabidopsis thaliana]
Length = 738
Score = 184 bits (467), Expect = 1e-44
Identities = 85/133 (63%), Positives = 108/133 (81%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SL+YARKVFD++P+PN + WNTLIRAYAS PDP+ S+ FL+M+ + PNK+TFPF+I
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAA+E+S+L +G HGMAVK+++ SDVF+ NSLIHCY +CGDLD A K+FT I E+DVV
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 40 SWNSMITAFVQAG 2
SWNSMI FVQ G
Sbjct: 199 SWNSMINGFVQKG 211
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Frame = -3
Query: 400 SLDY--ARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPF 227
S DY AR+V + MPQ ++ WN LI AY + P ++L++F + N+ T
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 226 VIKAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERD 47
+ A +++ AL +G H K + + + ++LIH Y+ CGDL+ + ++F + +RD
Sbjct: 371 TLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 430
Query: 46 VVSWNSMITAFVQAG 2
V W++MI G
Sbjct: 431 VFVWSAMIGGLAMHG 445
>ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X2 [Glycine max]
Length = 695
Score = 182 bits (462), Expect = 4e-44
Identities = 85/132 (64%), Positives = 103/132 (78%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
L YA+ VF+Q+PQPNLYCWNTLIR YASS DP QS LIFL+M+H C + PNKFTFPF+ K
Sbjct: 37 LIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFK 96
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
AAS L L +G V HGM +KASL SD+FILNSLI+ Y + G DLA+++FT +P +DVVS
Sbjct: 97 AASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVS 156
Query: 37 WNSMITAFVQAG 2
WN+MI AF G
Sbjct: 157 WNAMINAFALGG 168
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/131 (30%), Positives = 64/131 (48%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D A +FD MP WN LI AY + P +L +F M P++ T + A
Sbjct: 272 DEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCA 331
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
+++L A+ G H K ++ + + SL+ YA CG+L+ A ++F + +DV W
Sbjct: 332 SAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVW 391
Query: 34 NSMITAFVQAG 2
++MI A G
Sbjct: 392 SAMIGALAMYG 402
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPD-PPNKFTFPFVIK 218
D A +VF MP ++ WN +I A+A P ++LL+F M + D PN T V+
Sbjct: 140 DLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEM--EMKDVKPNVITMVSVLS 197
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A ++ L G + + N+++ Y CG ++ A +F K+ E+D+VS
Sbjct: 198 ACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVS 257
Query: 37 WNSMITAFVQAG 2
W +M+ + G
Sbjct: 258 WTTMLDGHAKLG 269
>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like isoform X1 [Glycine max]
Length = 780
Score = 182 bits (462), Expect = 4e-44
Identities = 85/132 (64%), Positives = 103/132 (78%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
L YA+ VF+Q+PQPNLYCWNTLIR YASS DP QS LIFL+M+H C + PNKFTFPF+ K
Sbjct: 122 LIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFK 181
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
AAS L L +G V HGM +KASL SD+FILNSLI+ Y + G DLA+++FT +P +DVVS
Sbjct: 182 AASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVS 241
Query: 37 WNSMITAFVQAG 2
WN+MI AF G
Sbjct: 242 WNAMINAFALGG 253
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/131 (30%), Positives = 64/131 (48%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D A +FD MP WN LI AY + P +L +F M P++ T + A
Sbjct: 357 DEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCA 416
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
+++L A+ G H K ++ + + SL+ YA CG+L+ A ++F + +DV W
Sbjct: 417 SAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVW 476
Query: 34 NSMITAFVQAG 2
++MI A G
Sbjct: 477 SAMIGALAMYG 487
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPD-PPNKFTFPFVIK 218
D A +VF MP ++ WN +I A+A P ++LL+F M + D PN T V+
Sbjct: 225 DLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEM--EMKDVKPNVITMVSVLS 282
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A ++ L G + + N+++ Y CG ++ A +F K+ E+D+VS
Sbjct: 283 ACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVS 342
Query: 37 WNSMITAFVQAG 2
W +M+ + G
Sbjct: 343 WTTMLDGHAKLG 354
>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Citrus sinensis]
Length = 746
Score = 181 bits (459), Expect = 9e-44
Identities = 83/133 (62%), Positives = 106/133 (79%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SL+YAR++FDQ+PQPNLY WNTLIRAY+SS +P+QS +IFL ++++ P PN+FTFPFVI
Sbjct: 88 SLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVI 147
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAA+ L RVG HGM +K+S + D+FI NSLIH YA CGDL +AY +F I ++DVV
Sbjct: 148 KAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVV 207
Query: 40 SWNSMITAFVQAG 2
SWNSMI+ FVQ G
Sbjct: 208 SWNSMISGFVQGG 220
Score = 82.0 bits (201), Expect = 8e-14
Identities = 43/131 (32%), Positives = 68/131 (51%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D A V +P + WN LI AY + P ++L IF + +P ++FTF V+ A
Sbjct: 324 DAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQLSKNVNP-DEFTFVSVLSA 382
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
++L A+ +G+ H K + + ++ SLI Y CG+LD A ++F + RDV W
Sbjct: 383 CAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVW 442
Query: 34 NSMITAFVQAG 2
++MI F G
Sbjct: 443 STMIAGFAMYG 453
>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
gi|557530863|gb|ESR42046.1| hypothetical protein
CICLE_v10011151mg [Citrus clementina]
Length = 737
Score = 181 bits (459), Expect = 9e-44
Identities = 83/133 (62%), Positives = 106/133 (79%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SL+YAR++FDQ+PQPNLY WNTLIRAY+SS +P+QS +IFL ++++ P PN+FTFPFVI
Sbjct: 79 SLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVI 138
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAA+ L RVG HGM +K+S + D+FI NSLIH YA CGDL +AY +F I ++DVV
Sbjct: 139 KAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVV 198
Query: 40 SWNSMITAFVQAG 2
SWNSMI+ FVQ G
Sbjct: 199 SWNSMISGFVQGG 211
Score = 82.0 bits (201), Expect = 8e-14
Identities = 43/131 (32%), Positives = 68/131 (51%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D A V +P + WN LI AY + P ++L IF + +P ++FTF V+ A
Sbjct: 315 DAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQLSKNVNP-DEFTFVSVLSA 373
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
++L A+ +G+ H K + + ++ SLI Y CG+LD A ++F + RDV W
Sbjct: 374 CAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVW 433
Query: 34 NSMITAFVQAG 2
++MI F G
Sbjct: 434 STMIAGFAMYG 444
>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 181 bits (459), Expect = 9e-44
Identities = 86/131 (65%), Positives = 102/131 (77%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
+LDYAR +FDQ+PQPNLY WNTLIRAYASS DP QS +IFL+++ C D PNKFTFPFVI
Sbjct: 74 TLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVI 133
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVV 41
KAASEL A RVG HGMA+K S D++ILNSL+ Y CGDL +A ++F I +DVV
Sbjct: 134 KAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVV 193
Query: 40 SWNSMITAFVQ 8
SWNSMI+AF Q
Sbjct: 194 SWNSMISAFAQ 204
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/131 (31%), Positives = 67/131 (51%)
Frame = -3
Query: 394 DYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKA 215
D AR VF+ MP + WN LI AY + P ++L IF + P++ T + A
Sbjct: 310 DAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSA 369
Query: 214 ASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSW 35
++L A+ +G H + + + +++SL+ YA CG L+ A ++F + ERDV W
Sbjct: 370 CAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVW 429
Query: 34 NSMITAFVQAG 2
++MI G
Sbjct: 430 SAMIAGLGMHG 440
Score = 68.6 bits (166), Expect = 9e-10
Identities = 38/132 (28%), Positives = 66/132 (50%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
L A ++F + ++ WN++I A+A P +L +FL M + PN T V+
Sbjct: 177 LSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENV-MPNSVTMVGVLS 235
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A ++ L G + + D+ + N+++ Y CG +D A K+F ++PERDV S
Sbjct: 236 ACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFS 295
Query: 37 WNSMITAFVQAG 2
W M+ + + G
Sbjct: 296 WTIMLDGYAKMG 307
>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 180 bits (456), Expect = 2e-43
Identities = 85/135 (62%), Positives = 102/135 (75%), Gaps = 2/135 (1%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
+LDYARKVFDQ+PQPNLY WN LIRA A+S DP+QS+L+F+ M+HD P PNKFTFP +I
Sbjct: 188 ALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLI 247
Query: 220 KAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIP--ERD 47
KA +E VG HGMA+K S DVF+LNSLIH YA+CG LDLAY +F I +D
Sbjct: 248 KAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKD 307
Query: 46 VVSWNSMITAFVQAG 2
+VSWNSM+T FVQ G
Sbjct: 308 IVSWNSMVTGFVQGG 322
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = -3
Query: 388 ARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNM-IHDCPDPPNKFTFPFVIKAA 212
AR +FD MP+ ++ WN LI Y S P ++L IF + + P++ T + A
Sbjct: 428 ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487
Query: 211 SELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSWN 32
++L A+ +G HG K + + + SLI Y+ GD++ A ++F I +DV W+
Sbjct: 488 AQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWS 547
Query: 31 SMITAFVQAG 2
+MI G
Sbjct: 548 AMIAGLAMHG 557
>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 180 bits (456), Expect = 2e-43
Identities = 85/134 (63%), Positives = 108/134 (80%), Gaps = 1/134 (0%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIH-DCPDPPNKFTFPFV 224
SL+YARKVFD++PQPN + WNTLIRAYAS PDP+ S+ FL+M+ + PNK+TFPF+
Sbjct: 80 SLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFL 139
Query: 223 IKAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDV 44
IKAA+E+S+L +G HGMA+K+++ SDVF+ NSLIHCY +CGDLD A K+FT I E+DV
Sbjct: 140 IKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 199
Query: 43 VSWNSMITAFVQAG 2
VSWNSMI FVQ G
Sbjct: 200 VSWNSMINGFVQKG 213
Score = 84.3 bits (207), Expect = 2e-14
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = -3
Query: 400 SLDY--ARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPF 227
S DY AR+V + MP+ ++ WN LI AY + P ++LL+F + N+ T
Sbjct: 313 SEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVS 372
Query: 226 VIKAASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERD 47
+ A +++ AL +G H K + + ++ ++LIH Y+ CGDL+ A ++F + +RD
Sbjct: 373 TLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRD 432
Query: 46 VVSWNSMITAFVQAG 2
V W++MI G
Sbjct: 433 VFVWSAMIGGLAMHG 447
>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 744
Score = 164 bits (414), Expect = 2e-38
Identities = 78/134 (58%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = -3
Query: 400 SLDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVI 221
SLDYA KVFD++PQPNL+ WN LIRAY+SS DP+QS+L+F+NMI + + P+KFT+PFV
Sbjct: 84 SLDYAHKVFDEIPQPNLFSWNALIRAYSSSQDPIQSILMFVNMICEGREFPSKFTYPFVF 143
Query: 220 KAASELSALRVGMVFHGMAVKA-SLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDV 44
KA++++ ALR G HGM VK + D+F+LNSLIH YA CG LD AY +F + RDV
Sbjct: 144 KASAKMKALRFGRGLHGMVVKGRDVGLDIFVLNSLIHFYADCGCLDEAYLVFENMQTRDV 203
Query: 43 VSWNSMITAFVQAG 2
VSWN+MI F + G
Sbjct: 204 VSWNTMILGFAEGG 217
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/129 (27%), Positives = 64/129 (49%)
Frame = -3
Query: 388 ARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIKAAS 209
AR + + MP ++ WN LI AY S P ++L +F + P++ T + A +
Sbjct: 323 ARSILNTMPSQDIAAWNALISAYEQSGKPKEALSVFNELQLIKKAEPDEVTLVCALSACA 382
Query: 208 ELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVSWNS 29
+L A+ +G H K + + + +LI Y+ CGD++ A ++F + RDV W++
Sbjct: 383 QLGAIDLGGWIHVYIKKQGIKLNCHLTTALIDMYSKCGDVEKALEMFDSVNIRDVFVWSA 442
Query: 28 MITAFVQAG 2
M+ G
Sbjct: 443 MVAGLAMHG 451
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/132 (28%), Positives = 66/132 (50%)
Frame = -3
Query: 397 LDYARKVFDQMPQPNLYCWNTLIRAYASSPDPLQSLLIFLNMIHDCPDPPNKFTFPFVIK 218
LD A VF+ M ++ WNT+I +A ++L +F M + P N T V+
Sbjct: 188 LDEAYLVFENMQTRDVVSWNTMILGFAEGGYADEALKMFHRMGEENVRP-NGVTMMAVLS 246
Query: 217 AASELSALRVGMVFHGMAVKASLDSDVFILNSLIHCYATCGDLDLAYKIFTKIPERDVVS 38
A + L G H + + + + N+++ Y CG ++ A ++F K+ E+D+VS
Sbjct: 247 ACGKKLDLEFGRWVHVFIKRNGIRESLILDNAILDMYMKCGSIEDAERLFHKMGEKDIVS 306
Query: 37 WNSMITAFVQAG 2
W +M+ + +AG
Sbjct: 307 WTTMLVGYARAG 318