BLASTX nr result

ID: Cocculus23_contig00052911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00052911
         (324 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006842241.1| hypothetical protein AMTR_s00078p00190280 [A...    57   4e-06
ref|XP_003559285.1| PREDICTED: uncharacterized protein LOC100828...    57   4e-06
ref|XP_002282025.2| PREDICTED: uncharacterized protein LOC100257...    56   6e-06

>ref|XP_006842241.1| hypothetical protein AMTR_s00078p00190280 [Amborella trichopoda]
           gi|548844290|gb|ERN03916.1| hypothetical protein
           AMTR_s00078p00190280 [Amborella trichopoda]
          Length = 549

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 37/75 (49%), Positives = 45/75 (60%)
 Frame = +1

Query: 100 MAETRRNRTSAITKTPEEEEEKLCFVDERRIGEASLSESELARFRLRERWELASVLNFLH 279
           MAE R  R    T T  E+E       E  I  +S  +S+ AR  LR RWELASVLNFLH
Sbjct: 1   MAERRGRRGPNGTTTLGEDESLQEIPLETLI--SSTVDSQSARLSLRGRWELASVLNFLH 58

Query: 280 VFKSVIRTNLELSAE 324
           VF+ +I  +LE+SAE
Sbjct: 59  VFQPIIHCDLEVSAE 73


>ref|XP_003559285.1| PREDICTED: uncharacterized protein LOC100828132 [Brachypodium
           distachyon]
          Length = 668

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = +1

Query: 79  PARSSSTMAETRRNRTSAITKTPEEEEEKL---CFVDERRIGEASLSESELARFRLRERW 249
           P + ++      R+R     K  EEEE++    C V    + E  L  +EL R+RLR  W
Sbjct: 42  PPQPAAPPRRPERSRQREKEKEEEEEEDETAPQCRVVTPLLAEP-LEPAELPRWRLRGMW 100

Query: 250 ELASVLNFLHVFKSVIRTNLELSAE 324
           ELASVLNFLHVF+S++   +E +AE
Sbjct: 101 ELASVLNFLHVFRSLLNIAVEFTAE 125


>ref|XP_002282025.2| PREDICTED: uncharacterized protein LOC100257807 [Vitis vinifera]
           gi|296081950|emb|CBI20955.3| unnamed protein product
           [Vitis vinifera]
          Length = 340

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
 Frame = +1

Query: 100 MAETRRNRTSA-----ITKTPEEEEEKLCFVDERRIGEASLSESELARFRLRERWELASV 264
           M+  RR R +A     + KT   E+  +       + ++  SE+  AR RLRERWELASV
Sbjct: 1   MSGVRRRRDAAGKERRLVKTDNGEDPVI-------LSDSLESETGSARIRLRERWELASV 53

Query: 265 LNFLHVFKSVIRTNLELSAE 324
           LNFL+VF+ VI +N ++SAE
Sbjct: 54  LNFLNVFEPVIGSNSKISAE 73


Top