BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00052833
         (384 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314911.1| pentatricopeptide repeat-containing family p...   103   3e-20
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   102   6e-20
ref|XP_007226966.1| hypothetical protein PRUPE_ppa025241mg [Prun...   101   1e-19
ref|XP_006437829.1| hypothetical protein CICLE_v10033304mg [Citr...   100   2e-19
ref|XP_004298334.1| PREDICTED: putative pentatricopeptide repeat...    97   2e-18
ref|XP_006348632.1| PREDICTED: putative pentatricopeptide repeat...    97   3e-18
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...    94   2e-17
ref|XP_004239007.1| PREDICTED: putative pentatricopeptide repeat...    94   2e-17
ref|XP_002514567.1| pentatricopeptide repeat-containing protein,...    94   2e-17
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...    92   6e-17
ref|XP_007045718.1| Pentatricopeptide repeat-containing protein ...    92   1e-16
gb|EXB44921.1| hypothetical protein L484_026509 [Morus notabilis]      89   5e-16
ref|XP_004509764.1| PREDICTED: putative pentatricopeptide repeat...    89   6e-16
ref|XP_006844123.1| hypothetical protein AMTR_s00006p00257020 [A...    85   1e-14
ref|XP_004511497.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_006301711.1| hypothetical protein CARUB_v10022169mg [Caps...    80   2e-13
ref|XP_007138310.1| hypothetical protein PHAVU_009G197900g [Phas...    79   5e-13
ref|XP_002887214.1| pentatricopeptide repeat-containing protein ...    79   9e-13
ref|NP_177059.1| pentatricopeptide repeat-containing protein [Ar...    78   1e-12
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...    78   1e-12

>ref|XP_002314911.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222863951|gb|EEF01082.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 743

 Score =  103 bits (256), Expect = 3e-20
 Identities = 48/83 (57%), Positives = 60/83 (72%)
 Frame = +3

Query: 135 SLLLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPH 314
           S LL+LC +  NQ Q K +HCL IK+L  P+TFL NNLI  YSK   ++YARH F+++P 
Sbjct: 9   SSLLKLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQ 68

Query: 315 PNLFSWNNILSAYSKSGRLLEMR 383
           PN FSWN +LSAYSKSG L  M+
Sbjct: 69  PNSFSWNTMLSAYSKSGDLSTMQ 91


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  102 bits (254), Expect = 6e-20
 Identities = 47/81 (58%), Positives = 58/81 (71%)
 Frame = +3

Query: 141 LLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPN 320
           LL+LC ++ NQ Q K +HCL +KT+  P+TFLSNNLI  Y K   L+YA H F+ IP PN
Sbjct: 11  LLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPN 70

Query: 321 LFSWNNILSAYSKSGRLLEMR 383
           LFSWN ILS YSK G L +M+
Sbjct: 71  LFSWNTILSVYSKLGLLSQMQ 91


>ref|XP_007226966.1| hypothetical protein PRUPE_ppa025241mg [Prunus persica]
           gi|462423902|gb|EMJ28165.1| hypothetical protein
           PRUPE_ppa025241mg [Prunus persica]
          Length = 743

 Score =  101 bits (251), Expect = 1e-19
 Identities = 47/81 (58%), Positives = 57/81 (70%)
 Frame = +3

Query: 141 LLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPN 320
           LL+LC QA N  Q K +HC  IKT+  P+TFL NN+I  Y +   L YARH F+Q+PHP 
Sbjct: 11  LLKLCCQAGNHAQAKKLHCHIIKTVASPETFLLNNIITTYGRLGNLRYARHVFDQMPHPT 70

Query: 321 LFSWNNILSAYSKSGRLLEMR 383
           LFSWN ILS YSKSG L +M+
Sbjct: 71  LFSWNAILSVYSKSGYLSDMQ 91


>ref|XP_006437829.1| hypothetical protein CICLE_v10033304mg [Citrus clementina]
           gi|568861577|ref|XP_006484277.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Citrus sinensis]
           gi|557540025|gb|ESR51069.1| hypothetical protein
           CICLE_v10033304mg [Citrus clementina]
          Length = 743

 Score =  100 bits (250), Expect = 2e-19
 Identities = 50/90 (55%), Positives = 62/90 (68%)
 Frame = +3

Query: 111 LPSVPDRLSLLLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYAR 290
           + S  +  + LL+LC +  +Q QLK IHCL IKTL  P+TFLSN L+  YSK   + YAR
Sbjct: 1   MSSPSNHYASLLKLCCENKDQSQLKKIHCLIIKTLTDPETFLSNCLVNCYSKVGNIKYAR 60

Query: 291 HTFNQIPHPNLFSWNNILSAYSKSGRLLEM 380
             F+++  PNLFSWN ILSAYSKSG L EM
Sbjct: 61  RLFDKMAQPNLFSWNTILSAYSKSGNLSEM 90


>ref|XP_004298334.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Fragaria vesca subsp. vesca]
          Length = 743

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/81 (58%), Positives = 58/81 (71%)
 Frame = +3

Query: 141 LLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPN 320
           LL+LC Q+ N  Q K IH   I+TL  P+TFL NNLI  Y K   L YARH F+QIPHPN
Sbjct: 11  LLKLCCQSGNHSQAKTIHSHIIRTLPSPETFLLNNLITTYGKLGNLKYARHVFDQIPHPN 70

Query: 321 LFSWNNILSAYSKSGRLLEMR 383
           LFS+N++LS YSKS R+ +M+
Sbjct: 71  LFSYNSLLSVYSKSRRVSDMQ 91


>ref|XP_006348632.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Solanum tuberosum]
          Length = 746

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 45/80 (56%), Positives = 54/80 (67%)
 Frame = +3

Query: 141 LLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPN 320
           LL+L  ++ NQ Q+K +HC  +KT+  P+TFL NNLI  YSK N   YAR  F +IP PN
Sbjct: 14  LLKLWCESQNQNQIKKLHCFILKTIANPETFLLNNLINAYSKLNNTGYARQVFEEIPQPN 73

Query: 321 LFSWNNILSAYSKSGRLLEM 380
            FSWN ILS YSKSG L  M
Sbjct: 74  QFSWNTILSVYSKSGNLSRM 93


>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522732|gb|AET03186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 748

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 47/93 (50%), Positives = 61/93 (65%)
 Frame = +3

Query: 102 NISLPSVPDRLSLLLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLS 281
           ++S  S  +    LL+LC +  N  + K +H   IKTL YP+TFL NNLI  Y+K   + 
Sbjct: 2   SLSHSSSSNHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIP 61

Query: 282 YARHTFNQIPHPNLFSWNNILSAYSKSGRLLEM 380
           YA   F+Q+PHPNL+SWN ILSAYSK GR+ EM
Sbjct: 62  YACKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 94


>ref|XP_004239007.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Solanum lycopersicum]
          Length = 743

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 42/80 (52%), Positives = 53/80 (66%)
 Frame = +3

Query: 141 LLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPN 320
           +L+L  Q+ NQ Q+K +HC  +KT+  P+TFL NNLI  YSK N   YAR  F +IP PN
Sbjct: 11  MLKLWCQSQNQNQIKKLHCFILKTIANPETFLLNNLINAYSKLNNTGYARQVFEEIPQPN 70

Query: 321 LFSWNNILSAYSKSGRLLEM 380
            FSWN +LS YSK G +  M
Sbjct: 71  QFSWNTVLSVYSKCGNISRM 90


>ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546171|gb|EEF47673.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/91 (49%), Positives = 59/91 (64%)
 Frame = +3

Query: 111 LPSVPDRLSLLLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYAR 290
           + S  ++ S LL+ C +  NQ Q K +HC  IKTL  P+ FL NNL+  Y K   ++YAR
Sbjct: 4   MSSSSNQYSSLLKFCCETRNQSQAKKLHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYAR 63

Query: 291 HTFNQIPHPNLFSWNNILSAYSKSGRLLEMR 383
           H F+ +P  N FSWN ILSAYSKSG L +M+
Sbjct: 64  HLFDGMPQRNSFSWNTILSAYSKSGHLPKMK 94


>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 43/80 (53%), Positives = 55/80 (68%)
 Frame = +3

Query: 144 LELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPNL 323
           L+ C +A N+ Q+K +HC  I+TL  P+TFL NNLI  Y K   L  AR+ F+ IP PNL
Sbjct: 12  LKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNL 71

Query: 324 FSWNNILSAYSKSGRLLEMR 383
           FSWN +LSAYSK G L +M+
Sbjct: 72  FSWNTLLSAYSKLGYLQDMQ 91


>ref|XP_007045718.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
           gi|508709653|gb|EOY01550.1| Pentatricopeptide
           repeat-containing protein [Theobroma cacao]
          Length = 800

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 42/80 (52%), Positives = 55/80 (68%)
 Frame = +3

Query: 141 LLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPN 320
           LL++C +  N+ Q K IHC  +KT   P+TFL NNL+  YSK   L+YAR+ F++I  PN
Sbjct: 68  LLKICTETRNRTQAKRIHCHILKTFKDPETFLLNNLVNAYSKLGDLTYARYVFDRILRPN 127

Query: 321 LFSWNNILSAYSKSGRLLEM 380
           LFSWN IL  YSK+G L +M
Sbjct: 128 LFSWNTILFTYSKAGNLSDM 147


>gb|EXB44921.1| hypothetical protein L484_026509 [Morus notabilis]
          Length = 743

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/81 (53%), Positives = 54/81 (66%)
 Frame = +3

Query: 141 LLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPN 320
           LL+LC +  NQ   K +H   ++ L  P+ FLSN LI  Y K  ++ YARH F+Q+P  N
Sbjct: 11  LLKLCCETQNQALAKKLHGHIVRNLTNPEIFLSNKLIDAYGKLGKVRYARHLFDQMPQRN 70

Query: 321 LFSWNNILSAYSKSGRLLEMR 383
           LFSWN ILSAYSKSG L EM+
Sbjct: 71  LFSWNTILSAYSKSGYLSEMQ 91


>ref|XP_004509764.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like isoform X1 [Cicer arietinum]
           gi|502154626|ref|XP_004509765.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like isoform X2 [Cicer arietinum]
          Length = 744

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/80 (52%), Positives = 56/80 (70%)
 Frame = +3

Query: 141 LLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPN 320
           LL+LC ++ N    K +H   IK++  P+TFL NNLI  Y+K   ++YAR  F++IPHP 
Sbjct: 12  LLKLCCESRNFNNAKNLHSHIIKSIPNPETFLLNNLISSYAKLGSITYARRVFDEIPHPT 71

Query: 321 LFSWNNILSAYSKSGRLLEM 380
           L+SWN ILSAYSK GR+ EM
Sbjct: 72  LYSWNTILSAYSKLGRVNEM 91


>ref|XP_006844123.1| hypothetical protein AMTR_s00006p00257020 [Amborella trichopoda]
           gi|548846522|gb|ERN05798.1| hypothetical protein
           AMTR_s00006p00257020 [Amborella trichopoda]
          Length = 965

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/91 (46%), Positives = 60/91 (65%)
 Frame = +3

Query: 108 SLPSVPDRLSLLLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYA 287
           S+ ++   LS LL+  P  +     K +HCL +KT+   DTF++NNLI LY+K   LSYA
Sbjct: 418 SMTNLSALLSSLLKQLPDPSKPHHGKKLHCLILKTVENTDTFVTNNLINLYAKSWNLSYA 477

Query: 288 RHTFNQIPHPNLFSWNNILSAYSKSGRLLEM 380
           R  F+++PH NL SWN++++ YSK G L EM
Sbjct: 478 RRVFDRMPHKNLISWNSMITGYSKWGFLREM 508


>ref|XP_004511497.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Cicer arietinum]
          Length = 769

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = +3

Query: 132 LSLLLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIP 311
           L+ LL+ C    + +  K +H    +  ++ DTFLSN LI+LYSK N +S+A H F++IP
Sbjct: 8   LANLLQSCITNKSLLPAKIVHARIFRFNLFSDTFLSNTLIELYSKCNLISFAHHVFDKIP 67

Query: 312 HPNLFSWNNILSAYSKSGRL 371
           H N+FSWN IL+AY KS  L
Sbjct: 68  HKNIFSWNAILAAYCKSNNL 87


>ref|XP_006301711.1| hypothetical protein CARUB_v10022169mg [Capsella rubella]
           gi|482570421|gb|EOA34609.1| hypothetical protein
           CARUB_v10022169mg [Capsella rubella]
          Length = 743

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = +3

Query: 162 ATNQIQ-LKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPNLFSWNN 338
           A NQ + +K IH   I+TL++P+TFL NN++  Y+     +YAR  F+ IP PNLFSWNN
Sbjct: 18  ARNQSRHVKMIHGNIIRTLLHPETFLYNNIVHAYAVVRSSTYARRVFDGIPQPNLFSWNN 77

Query: 339 ILSAYSKSGRLLEM 380
           +L AYSKSG L EM
Sbjct: 78  LLLAYSKSGHLSEM 91


>ref|XP_007138310.1| hypothetical protein PHAVU_009G197900g [Phaseolus vulgaris]
           gi|561011397|gb|ESW10304.1| hypothetical protein
           PHAVU_009G197900g [Phaseolus vulgaris]
          Length = 747

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = +3

Query: 183 KAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPNLFSWNNILSAYSKS 362
           K +HC  IK    P+TFL NNL+  Y+K   + YAR  F+Q+P  NL+SWN +LS+YSK 
Sbjct: 29  KKVHCNIIKAFQNPETFLLNNLVNAYAKLGSIIYARRVFDQMPQRNLYSWNTLLSSYSKL 88

Query: 363 GRLLEMR 383
           GRL EM+
Sbjct: 89  GRLPEMK 95


>ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333055|gb|EFH63473.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 740

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 37/67 (55%), Positives = 46/67 (68%)
 Frame = +3

Query: 180 LKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPNLFSWNNILSAYSK 359
           +K IH   I+TL +P+TFL NN++  Y+      YAR  F+ IP PNLFSWNN+L AYSK
Sbjct: 22  VKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSK 81

Query: 360 SGRLLEM 380
           SG L EM
Sbjct: 82  SGHLSEM 88


>ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g68930 gi|12323213|gb|AAG51585.1|AC011665_6
           hypothetical protein [Arabidopsis thaliana]
           gi|332196743|gb|AEE34864.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
 Frame = +3

Query: 162 ATNQIQ-LKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIPHPNLFSWNN 338
           A NQ + +K IH   I+ L YP+TFL NN++  Y+     +YAR  F++IP PNLFSWNN
Sbjct: 18  ARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNN 77

Query: 339 ILSAYSKSGRLLEM 380
           +L AYSK+G + EM
Sbjct: 78  LLLAYSKAGLISEM 91


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like isoform X1 [Glycine max]
           gi|571497773|ref|XP_006594017.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like isoform X2 [Glycine max]
          Length = 747

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/83 (45%), Positives = 51/83 (61%)
 Frame = +3

Query: 132 LSLLLELCPQATNQIQLKAIHCLTIKTLVYPDTFLSNNLIKLYSKFNRLSYARHTFNQIP 311
           +SL    C    +    K IHC  IK    P+ FL NNL+  Y+KF+R++YAR  F+Q+P
Sbjct: 12  MSLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMP 71

Query: 312 HPNLFSWNNILSAYSKSGRLLEM 380
             NL+SWN +LS+YSK   L EM
Sbjct: 72  QRNLYSWNTLLSSYSKLACLPEM 94