BLASTX nr result
ID: Cocculus23_contig00052603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00052603
(204 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36896.3| unnamed protein product [Vitis vinifera] 99 6e-19
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica... 99 6e-19
gb|EXB95734.1| putative ATP-dependent RNA helicase kurz [Morus n... 91 2e-16
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP... 91 2e-16
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica... 91 2e-16
ref|XP_002865336.1| helicase domain-containing protein [Arabidop... 91 2e-16
ref|XP_006414901.1| hypothetical protein EUTSA_v10024243mg [Eutr... 90 3e-16
ref|XP_007009967.1| RNA helicase family protein [Theobroma cacao... 90 3e-16
gb|AAG51287.1|AC027035_10 helicase, putative [Arabidopsis thaliana] 90 3e-16
ref|NP_174605.1| protein FASCIATED STEM 4 [Arabidopsis thaliana]... 90 3e-16
ref|XP_002893766.1| helicase domain-containing protein [Arabidop... 90 4e-16
ref|XP_007051013.1| RNA helicase family protein, putative [Theob... 89 6e-16
ref|XP_006303138.1| hypothetical protein CARUB_v10008109mg [Caps... 87 2e-15
ref|XP_002876980.1| hypothetical protein ARALYDRAFT_904844 [Arab... 86 4e-15
gb|EAY87444.1| hypothetical protein OsI_08853 [Oryza sativa Indi... 86 4e-15
dbj|BAJ98582.1| predicted protein [Hordeum vulgare subsp. vulgare] 86 7e-15
ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group] g... 84 2e-14
ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helica... 84 3e-14
ref|XP_004985938.1| PREDICTED: probable ATP-dependent RNA helica... 83 3e-14
gb|EMS60385.1| putative ATP-dependent RNA helicase kurz [Triticu... 83 3e-14
>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
Length = 1098
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPH 26
LL TKRPYMHGVT V+P WL +Y LC+FSAP TDPKP+YE DQVFC VIPTFGPH
Sbjct: 905 LLQTKRPYMHGVTNVKPDWLVKYAAPLCSFSAPLTDPKPYYEPLADQVFCWVIPTFGPH 963
>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
vinifera]
Length = 1414
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPH 26
LL TKRPYMHGVT V+P WL +Y LC+FSAP TDPKP+YE DQVFC VIPTFGPH
Sbjct: 1221 LLQTKRPYMHGVTNVKPDWLVKYAAPLCSFSAPLTDPKPYYEPLADQVFCWVIPTFGPH 1279
>gb|EXB95734.1| putative ATP-dependent RNA helicase kurz [Morus notabilis]
Length = 1380
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPH 26
LL TKRPYMHGVT+V+P+WL +Y SLC FSAP TD KP+Y+ DQV V+PTFGPH
Sbjct: 1178 LLQTKRPYMHGVTRVKPEWLVEYARSLCTFSAPSTDTKPYYDPRTDQVLHYVVPTFGPH 1236
>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX37-like [Cucumis sativus]
Length = 1333
Score = 90.5 bits (223), Expect = 2e-16
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPH 26
LL TKRPYMHG+T V+P WL +Y SLC FSAP TDPKP+Y+++ D V+ V PTFGPH
Sbjct: 1139 LLRTKRPYMHGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPH 1197
>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
sativus]
Length = 1333
Score = 90.5 bits (223), Expect = 2e-16
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPH 26
LL TKRPYMHG+T V+P WL +Y SLC FSAP TDPKP+Y+++ D V+ V PTFGPH
Sbjct: 1139 LLRTKRPYMHGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPH 1197
>ref|XP_002865336.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297311171|gb|EFH41595.1| helicase domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 90.5 bits (223), Expect = 2e-16
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LLLT RPYMHG T+V+P+WL ++ SLC FSAP DPKP+Y +E D+V C V+P+FGPH+
Sbjct: 1069 LLLTNRPYMHGATRVKPEWLVKHAKSLCVFSAPLKDPKPYYSSEEDRVLCWVVPSFGPHN 1128
>ref|XP_006414901.1| hypothetical protein EUTSA_v10024243mg [Eutrema salsugineum]
gi|557116071|gb|ESQ56354.1| hypothetical protein
EUTSA_v10024243mg [Eutrema salsugineum]
Length = 1211
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPH 26
LLLT RPYMHG T+V+P+WL ++ SL FSAP DPKP+Y +E+D+VFC V+P+FGPH
Sbjct: 1022 LLLTNRPYMHGATRVKPEWLVKHAKSLTVFSAPLKDPKPYYSSEVDRVFCWVVPSFGPH 1080
>ref|XP_007009967.1| RNA helicase family protein [Theobroma cacao]
gi|508726880|gb|EOY18777.1| RNA helicase family protein
[Theobroma cacao]
Length = 1389
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPH 26
LL TKRPYMHGVT V+ WL Y S C FSAP DPKP+Y+ + D+V+C V+PTFGPH
Sbjct: 1197 LLHTKRPYMHGVTSVKSDWLVNYAKSYCTFSAPLADPKPYYDPQTDEVYCWVVPTFGPH 1255
>gb|AAG51287.1|AC027035_10 helicase, putative [Arabidopsis thaliana]
Length = 1191
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LLLT RPYMHG T+V P+WL ++ SLC FSAP DPKP+Y +E D+V C V+P+FGPH+
Sbjct: 1013 LLLTNRPYMHGATRVRPEWLVKHAKSLCVFSAPLKDPKPYYSSEEDRVLCWVVPSFGPHN 1072
>ref|NP_174605.1| protein FASCIATED STEM 4 [Arabidopsis thaliana]
gi|12322388|gb|AAG51220.1|AC051630_17 RNA helicase,
putative; 27866-23496 [Arabidopsis thaliana]
gi|332193467|gb|AEE31588.1| putative RNA helicase
[Arabidopsis thaliana]
Length = 1237
Score = 90.1 bits (222), Expect = 3e-16
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LLLT RPYMHG T+V P+WL ++ SLC FSAP DPKP+Y +E D+V C V+P+FGPH+
Sbjct: 1059 LLLTNRPYMHGATRVRPEWLVKHAKSLCVFSAPLKDPKPYYSSEEDRVLCWVVPSFGPHN 1118
>ref|XP_002893766.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297339608|gb|EFH70025.1| helicase domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1245
Score = 89.7 bits (221), Expect = 4e-16
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LLLT RPYMHG T+V+P+WL ++ SLC FS+P DPKP+Y +E D+V C VIP+FGPH+
Sbjct: 1063 LLLTNRPYMHGATRVKPEWLVKHAKSLCVFSSPLKDPKPYYSSEEDRVLCWVIPSFGPHN 1122
>ref|XP_007051013.1| RNA helicase family protein, putative [Theobroma cacao]
gi|508703274|gb|EOX95170.1| RNA helicase family protein,
putative [Theobroma cacao]
Length = 1264
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPH 26
LL TKRPYMHGVT V+ WL +Y S C FSAP TD KP+Y+ + D+V+C V+PTFGPH
Sbjct: 1072 LLHTKRPYMHGVTSVKSDWLVKYAKSYCTFSAPLTDRKPYYDPQTDEVYCWVVPTFGPH 1130
>ref|XP_006303138.1| hypothetical protein CARUB_v10008109mg [Capsella rubella]
gi|482571849|gb|EOA36036.1| hypothetical protein
CARUB_v10008109mg [Capsella rubella]
Length = 1244
Score = 87.4 bits (215), Expect = 2e-15
Identities = 35/60 (58%), Positives = 48/60 (80%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LLLT RPYMHG T+V+P+WL ++ SLC FS+P DPKP+Y +E D+V C V+P+FGP++
Sbjct: 1069 LLLTNRPYMHGATRVKPEWLVKHAKSLCVFSSPLKDPKPYYSSEEDRVLCYVVPSFGPYN 1128
>ref|XP_002876980.1| hypothetical protein ARALYDRAFT_904844 [Arabidopsis lyrata subsp.
lyrata] gi|297322818|gb|EFH53239.1| hypothetical protein
ARALYDRAFT_904844 [Arabidopsis lyrata subsp. lyrata]
Length = 995
Score = 86.3 bits (212), Expect = 4e-15
Identities = 34/60 (56%), Positives = 48/60 (80%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LLLT RPYMHG T+++P+WL ++ SLC FSAP DPKP+Y +E D+V C ++P+FGP++
Sbjct: 841 LLLTNRPYMHGATRMKPEWLVKHAKSLCVFSAPLKDPKPYYSSEGDRVLCWIVPSFGPYN 900
Score = 82.8 bits (203), Expect = 5e-14
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LLLT +PYMH T+V+PKWL ++ SLC FSAP DPKP+Y +E D+V C +P+FG H+
Sbjct: 698 LLLTNKPYMHRATRVKPKWLVKHAKSLCVFSAPLKDPKPYYSSEGDRVMCWAVPSFGSHN 757
>gb|EAY87444.1| hypothetical protein OsI_08853 [Oryza sativa Indica Group]
Length = 1260
Score = 86.3 bits (212), Expect = 4e-15
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LL TKR YMHGVT V+P W+ +Y SLC FSAP DPKP+YE + DQV+C VIP F H+
Sbjct: 1044 LLHTKRSYMHGVTSVKPGWILKYASSLCTFSAPLEDPKPYYEPQKDQVYCYVIPIFSRHN 1103
>dbj|BAJ98582.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1287
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LL TKRPY+HGVT V+P WL +Y SLC FSAP DPKP+YE + DQV+C V P F H+
Sbjct: 1097 LLNTKRPYIHGVTSVKPGWLFKYASSLCTFSAPLEDPKPYYEPQNDQVYCYVSPIFSRHN 1156
>ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group]
gi|46390441|dbj|BAD15903.1| putative kurz protein [Oryza
sativa Japonica Group] gi|113537586|dbj|BAF09969.1|
Os02g0736600 [Oryza sativa Japonica Group]
gi|215768291|dbj|BAH00520.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 1272
Score = 84.0 bits (206), Expect = 2e-14
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LL TKR YMHGVT V+P W+ +Y SLC FSAP DPKP+YE + DQV+C V P F H+
Sbjct: 1079 LLHTKRSYMHGVTSVKPGWILKYASSLCTFSAPLEDPKPYYEPQKDQVYCYVSPIFSRHN 1138
>ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like
[Brachypodium distachyon]
Length = 1273
Score = 83.6 bits (205), Expect = 3e-14
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LL TKR YMHGVT V+P W+ +Y SLC FSAP DPKP+YE + DQV+C V P F H+
Sbjct: 1083 LLNTKRSYMHGVTSVKPGWILKYASSLCTFSAPLEDPKPYYEPQNDQVYCYVSPIFSRHN 1142
>ref|XP_004985938.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Setaria
italica]
Length = 1287
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LL TKR YMHGVT ++P WL +Y GSLC FSAP DPKP+Y+ DQV+C V P F H+
Sbjct: 1091 LLSTKRLYMHGVTTIKPGWLLKYAGSLCTFSAPLEDPKPYYDPMNDQVYCYVSPVFSRHN 1150
>gb|EMS60385.1| putative ATP-dependent RNA helicase kurz [Triticum urartu]
Length = 1146
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -3
Query: 202 LLLTKRPYMHGVTKVEPKWLAQYVGSLCNFSAPFTDPKPFYETELDQVFCSVIPTFGPHS 23
LL TKR YMHGVT V+P WL +Y SLC FSAP DPKP+YE + DQV+C V P F H+
Sbjct: 956 LLNTKRLYMHGVTSVKPGWLFKYASSLCTFSAPLEDPKPYYEPQNDQVYCYVSPIFSRHN 1015