BLASTX nr result
ID: Cocculus23_contig00052574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00052574
(226 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299515.2| hypothetical protein POPTR_0001s09740g, part... 122 5e-26
ref|XP_007040331.1| Pentatricopeptide repeat superfamily protein... 120 2e-25
ref|XP_007209027.1| hypothetical protein PRUPE_ppa023983mg, part... 118 1e-24
emb|CBI34375.3| unnamed protein product [Vitis vinifera] 117 1e-24
ref|XP_006439492.1| hypothetical protein CICLE_v10018905mg [Citr... 109 5e-22
ref|XP_006476514.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_006827220.1| hypothetical protein AMTR_s00010p00260120 [A... 95 1e-17
ref|XP_002446412.1| hypothetical protein SORBIDRAFT_06g015580 [S... 95 1e-17
gb|EXB70668.1| hypothetical protein L484_023854 [Morus notabilis] 94 3e-17
ref|XP_006664625.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea m... 93 3e-17
tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea m... 93 3e-17
ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [S... 93 4e-17
ref|XP_007037324.1| Pentatricopeptide repeat-containing protein,... 92 8e-17
ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
ref|XP_004984893.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
ref|XP_004984890.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
gb|EMT07476.1| hypothetical protein F775_15307 [Aegilops tauschii] 91 1e-16
gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indi... 91 1e-16
>ref|XP_002299515.2| hypothetical protein POPTR_0001s09740g, partial [Populus
trichocarpa] gi|550346914|gb|EEE84320.2| hypothetical
protein POPTR_0001s09740g, partial [Populus trichocarpa]
Length = 706
Score = 122 bits (306), Expect = 5e-26
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC++DLL RVG LE+AK+TID MPI D HIWQILLSAC+IHGHVELGR+ A KLLE+
Sbjct: 601 HYACMIDLLGRVGLLEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEI 660
Query: 44 EPENDSAYILLSNL 3
PEN+SAYILLSNL
Sbjct: 661 HPENESAYILLSNL 674
>ref|XP_007040331.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508777576|gb|EOY24832.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 811
Score = 120 bits (302), Expect = 2e-25
Identities = 57/74 (77%), Positives = 67/74 (90%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC++DLL RVG LE+AKRTIDQMPI DA IWQILLSACSIHG+V++GRI A+KLLEL
Sbjct: 658 HYACMIDLLGRVGLLEDAKRTIDQMPIGPDARIWQILLSACSIHGNVDMGRIAASKLLEL 717
Query: 44 EPENDSAYILLSNL 3
+P N+SAY+LLSNL
Sbjct: 718 QPNNESAYVLLSNL 731
>ref|XP_007209027.1| hypothetical protein PRUPE_ppa023983mg, partial [Prunus persica]
gi|462404762|gb|EMJ10226.1| hypothetical protein
PRUPE_ppa023983mg, partial [Prunus persica]
Length = 697
Score = 118 bits (295), Expect = 1e-24
Identities = 55/74 (74%), Positives = 66/74 (89%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYA +V+LL R+G LEEAKRTIDQMPIC DAHIWQILLSAC+IH ++++GR+ A KLLE
Sbjct: 592 HYASVVELLSRLGLLEEAKRTIDQMPICPDAHIWQILLSACNIHKNMDMGRVAAQKLLEF 651
Query: 44 EPENDSAYILLSNL 3
EP+N+SAYILLSNL
Sbjct: 652 EPDNESAYILLSNL 665
>emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 117 bits (294), Expect = 1e-24
Identities = 54/74 (72%), Positives = 64/74 (86%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC++DL RVG LE+AKRTIDQMPI DA IWQILLS C+IHG+V+LG + A KL+EL
Sbjct: 658 HYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIEL 717
Query: 44 EPENDSAYILLSNL 3
+PENDSAY+LLSNL
Sbjct: 718 QPENDSAYVLLSNL 731
>ref|XP_006439492.1| hypothetical protein CICLE_v10018905mg [Citrus clementina]
gi|557541754|gb|ESR52732.1| hypothetical protein
CICLE_v10018905mg [Citrus clementina]
Length = 801
Score = 109 bits (272), Expect = 5e-22
Identities = 51/74 (68%), Positives = 63/74 (85%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VDLL RVG LE AK TIDQMPI DAHIWQ LLSAC+I+G+++LG + +KLLEL
Sbjct: 658 HYACIVDLLGRVGLLEGAKMTIDQMPIPPDAHIWQSLLSACTIYGNIDLGLLAGSKLLEL 717
Query: 44 EPENDSAYILLSNL 3
+P+N+S Y+LLSNL
Sbjct: 718 QPDNESTYVLLSNL 731
>ref|XP_006476514.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Citrus sinensis]
Length = 801
Score = 107 bits (266), Expect = 2e-21
Identities = 50/74 (67%), Positives = 63/74 (85%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VDLL RVG LE AK TI+QMPI DAHIWQ LLSAC+I G+++LG + +KLLEL
Sbjct: 658 HYACIVDLLGRVGLLEGAKMTIEQMPIPPDAHIWQSLLSACTIDGNIDLGLLAGSKLLEL 717
Query: 44 EPENDSAYILLSNL 3
+P+N+S+Y+LLSNL
Sbjct: 718 QPDNESSYVLLSNL 731
>ref|XP_006827220.1| hypothetical protein AMTR_s00010p00260120 [Amborella trichopoda]
gi|548831649|gb|ERM94457.1| hypothetical protein
AMTR_s00010p00260120 [Amborella trichopoda]
Length = 806
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/74 (60%), Positives = 54/74 (72%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VDLL R G+LEEA R I+ MPI DA IW LL C +HGH ELG++ A KLLEL
Sbjct: 702 HYACIVDLLGRSGKLEEAWRFIESMPIEPDALIWGALLGGCRVHGHEELGKLAAQKLLEL 761
Query: 44 EPENDSAYILLSNL 3
EP + AY+ LSN+
Sbjct: 762 EPRDSGAYVCLSNI 775
>ref|XP_002446412.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
gi|241937595|gb|EES10740.1| hypothetical protein
SORBIDRAFT_06g015580 [Sorghum bicolor]
Length = 317
Score = 94.7 bits (234), Expect = 1e-17
Identities = 39/73 (53%), Positives = 58/73 (79%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VD+L R G+L+ A+R +D+MPI +DA +W+ LLSAC +H ++E+G + A LLEL
Sbjct: 84 HYACVVDILGRAGQLDRARRFVDEMPITADAMVWRTLLSACKVHKNIEIGELAAKHLLEL 143
Query: 44 EPENDSAYILLSN 6
EP + ++Y+LLSN
Sbjct: 144 EPHDSASYVLLSN 156
>gb|EXB70668.1| hypothetical protein L484_023854 [Morus notabilis]
Length = 628
Score = 93.6 bits (231), Expect = 3e-17
Identities = 44/74 (59%), Positives = 53/74 (71%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HY C+VDLL R G +EEA+ I MP+ DA+IW LL AC IHG VELG V KLLE+
Sbjct: 480 HYGCMVDLLGRAGLIEEAEELISSMPMEPDAYIWGALLGACRIHGEVELGEDVMEKLLEV 539
Query: 44 EPENDSAYILLSNL 3
EPE D AY+L+SN+
Sbjct: 540 EPEKDGAYVLMSNI 553
>ref|XP_006664625.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Oryza brachyantha]
Length = 919
Score = 93.6 bits (231), Expect = 3e-17
Identities = 38/73 (52%), Positives = 59/73 (80%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VD+L R G+L+ AK+ I++MPI +DA +W+ LLSAC +H ++E+G + A +L+EL
Sbjct: 686 HYACVVDILGRAGQLDRAKKFIEEMPITADAMVWRTLLSACKVHKNIEVGELAAKRLMEL 745
Query: 44 EPENDSAYILLSN 6
EP + ++Y+LLSN
Sbjct: 746 EPHDSASYVLLSN 758
>tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 93.2 bits (230), Expect = 3e-17
Identities = 39/73 (53%), Positives = 58/73 (79%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VD+L R G+L+ A+R +D+MPI ++A IW+ LLSAC +H ++E+G + A LLEL
Sbjct: 687 HYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLEL 746
Query: 44 EPENDSAYILLSN 6
EP + ++Y+LLSN
Sbjct: 747 EPHDSASYVLLSN 759
>tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein
ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 93.2 bits (230), Expect = 3e-17
Identities = 39/73 (53%), Positives = 58/73 (79%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VD+L R G+L+ A+R +D+MPI ++A IW+ LLSAC +H ++E+G + A LLEL
Sbjct: 687 HYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLEL 746
Query: 44 EPENDSAYILLSN 6
EP + ++Y+LLSN
Sbjct: 747 EPHDSASYVLLSN 759
>ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein
SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HY C++DLL R G++ EA TIDQMP+ ++ IW LL+AC +HG+ E+G +VA +LLEL
Sbjct: 394 HYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLEL 453
Query: 44 EPENDSAYILLSNL 3
+PEN YILLSN+
Sbjct: 454 DPENSMVYILLSNI 467
>ref|XP_007037324.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|590667837|ref|XP_007037325.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508774569|gb|EOY21825.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508774570|gb|EOY21826.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 894
Score = 92.0 bits (227), Expect = 8e-17
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VD+L R+G+L EA++ I+ MPI +A IW LLSAC +HG VELGR+ A K++EL
Sbjct: 790 HYACIVDILGRLGKLREAEKFINNMPIEPNAFIWGTLLSACKVHGDVELGRLAAKKIIEL 849
Query: 44 EPENDSAYILLSNL 3
EP + AY+ LSN+
Sbjct: 850 EPCHSGAYVSLSNI 863
>ref|XP_004494504.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/74 (58%), Positives = 54/74 (72%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC+VDLL RVG LEEA I+ MPI D+ +W LL AC +GHVE+GR VA +L +L
Sbjct: 409 HYACMVDLLGRVGRLEEAWNFIESMPIKPDSSVWGALLGACGKYGHVEMGREVAERLFKL 468
Query: 44 EPENDSAYILLSNL 3
EP+N Y+LLSN+
Sbjct: 469 EPDNPGNYVLLSNI 482
>ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 670
Score = 91.7 bits (226), Expect = 1e-16
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HY CLVDL CR G L EAK I+ MPI IW +LSAC +HG++EL I +T+LL+L
Sbjct: 518 HYGCLVDLFCRSGRLVEAKDVIENMPIQPSRSIWGAMLSACRVHGNMELAEIASTELLKL 577
Query: 44 EPENDSAYILLSNL 3
EPE + YILLSN+
Sbjct: 578 EPEKEGGYILLSNI 591
>ref|XP_004984893.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like isoform X4 [Setaria italica]
Length = 889
Score = 91.3 bits (225), Expect = 1e-16
Identities = 36/73 (49%), Positives = 58/73 (79%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC++D+L R G+L+ A++ +++MPI +DA +W+ LLSAC +H ++E+G + A LLEL
Sbjct: 656 HYACVMDILGRAGQLDRARKFVEEMPIAADAMVWRTLLSACKVHKNIEIGELAAKHLLEL 715
Query: 44 EPENDSAYILLSN 6
EP + ++Y+LLSN
Sbjct: 716 EPHDSASYVLLSN 728
>ref|XP_004984890.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like isoform X1 [Setaria italica]
gi|514820405|ref|XP_004984891.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X2 [Setaria italica]
gi|514820407|ref|XP_004984892.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g13650-like isoform X3 [Setaria italica]
Length = 920
Score = 91.3 bits (225), Expect = 1e-16
Identities = 36/73 (49%), Positives = 58/73 (79%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC++D+L R G+L+ A++ +++MPI +DA +W+ LLSAC +H ++E+G + A LLEL
Sbjct: 687 HYACVMDILGRAGQLDRARKFVEEMPIAADAMVWRTLLSACKVHKNIEIGELAAKHLLEL 746
Query: 44 EPENDSAYILLSN 6
EP + ++Y+LLSN
Sbjct: 747 EPHDSASYVLLSN 759
>gb|EMT07476.1| hypothetical protein F775_15307 [Aegilops tauschii]
Length = 696
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/74 (55%), Positives = 55/74 (74%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HY C++DLL R G+L EA TI +MP+ ++ IW LL+AC +HG+ E+G + A +LLEL
Sbjct: 463 HYGCIIDLLGRAGKLREALETIGKMPMKPNSAIWGTLLAACRVHGNSEIGELAAERLLEL 522
Query: 44 EPENDSAYILLSNL 3
EPEN AY+LLSNL
Sbjct: 523 EPENSMAYVLLSNL 536
>gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 91.3 bits (225), Expect = 1e-16
Identities = 36/73 (49%), Positives = 57/73 (78%)
Frame = -3
Query: 224 HYACLVDLLCRVGELEEAKRTIDQMPICSDAHIWQILLSACSIHGHVELGRIVATKLLEL 45
HYAC++D+ R G+L+ AK+ +++MPI +DA +W+ LLSAC +H ++E+G + A LLEL
Sbjct: 662 HYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLEL 721
Query: 44 EPENDSAYILLSN 6
EP + ++Y+LLSN
Sbjct: 722 EPHDSASYVLLSN 734