BLASTX nr result
ID: Cocculus23_contig00051962
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00051962
(274 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28363.3| unnamed protein product [Vitis vinifera] 103 3e-20
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_007015876.1| Pentatricopeptide repeat superfamily protein... 94 2e-17
ref|XP_006851539.1| hypothetical protein AMTR_s00040p00174700 [A... 91 1e-16
ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [S... 71 2e-10
ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group] g... 68 2e-09
gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indi... 68 2e-09
gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays] 67 2e-09
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
gb|EMT02731.1| Pentatricopeptide repeat-containing protein [Aegi... 67 3e-09
ref|XP_006647336.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006424291.1| hypothetical protein CICLE_v10029844mg, part... 60 4e-07
ref|XP_004952633.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 103 bits (256), Expect = 3e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +1
Query: 1 KEVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVE 180
KE+HC+ILR+GY SN S++NTLI LY E H+QAL LCS+IP +EI W+ L++A E
Sbjct: 484 KELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEISWNFLIRACLGAE 543
Query: 181 HQELILKLLPRIQKSSGRLDTTSVCCILNSC 273
E+I KLL RIQ S G LD S C I SC
Sbjct: 544 DYEIIHKLLWRIQVSHGNLDPVSACDIFASC 574
>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 906
Score = 103 bits (256), Expect = 3e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +1
Query: 1 KEVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVE 180
KE+HC+ILR+GY SN S++NTLI LY E H+QAL LCS+IP +EI W+ L++A E
Sbjct: 460 KELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEISWNFLIRACLGAE 519
Query: 181 HQELILKLLPRIQKSSGRLDTTSVCCILNSC 273
E+I KLL RIQ S G LD S C I SC
Sbjct: 520 DYEIIHKLLWRIQVSHGNLDPVSACDIFASC 550
>ref|XP_007015876.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508786239|gb|EOY33495.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 974
Score = 94.0 bits (232), Expect = 2e-17
Identities = 49/91 (53%), Positives = 62/91 (68%)
Frame = +1
Query: 1 KEVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVE 180
+E+H +IL+T YGSN S++N LI LY E H+QAL LCSLI AEI W+LL+QA R
Sbjct: 528 RELHGKILKTCYGSNASVVNMLINLYSELSDHQQALKLCSLILDAEISWNLLIQACLRAN 587
Query: 181 HQELILKLLPRIQKSSGRLDTTSVCCILNSC 273
E I KLL RIQ SG ++ +VC I +SC
Sbjct: 588 DYETIHKLLRRIQSCSGCIEPITVCDIFSSC 618
>ref|XP_006851539.1| hypothetical protein AMTR_s00040p00174700 [Amborella trichopoda]
gi|548855233|gb|ERN13120.1| hypothetical protein
AMTR_s00040p00174700 [Amborella trichopoda]
Length = 894
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/91 (48%), Positives = 58/91 (63%)
Frame = +1
Query: 1 KEVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVE 180
KE+HC I+RTGYGS + +INTLI LY EF QAL LC IP ++I W L+QA R
Sbjct: 449 KELHCNIIRTGYGSEVPVINTLINLYCEFGLLEQALNLCDSIPSSKILWGYLIQACSRTG 508
Query: 181 HQELILKLLPRIQKSSGRLDTTSVCCILNSC 273
E IL+L ++ +SS LD + C ++ SC
Sbjct: 509 DHERILELFKKVHQSSANLDHNTSCYVIESC 539
>ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
gi|241933759|gb|EES06904.1| hypothetical protein
SORBIDRAFT_04g021580 [Sorghum bicolor]
Length = 798
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/90 (37%), Positives = 53/90 (58%)
Frame = +1
Query: 4 EVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVEH 183
E+H +R+GYG+N S++ +LI YL + QAL LC + +I WD L+++F +V+H
Sbjct: 516 EIHSNSIRSGYGTNTSVLKSLITFYLRQGRYHQALKLCLALSNHDISWDTLVESFSQVDH 575
Query: 184 QELILKLLPRIQKSSGRLDTTSVCCILNSC 273
I+ L IQ+ LD + IL+SC
Sbjct: 576 HVGIVNLFHVIQRCGANLDYHTARLILSSC 605
>ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza
sativa Japonica Group] gi|125582364|gb|EAZ23295.1|
hypothetical protein OsJ_06992 [Oryza sativa Japonica
Group] gi|215696993|dbj|BAG90987.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 787
Score = 67.8 bits (164), Expect = 2e-09
Identities = 36/90 (40%), Positives = 49/90 (54%)
Frame = +1
Query: 4 EVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVEH 183
E+H +R GYG++ S++ +LI YL QAL LC + +EI W L Q F +
Sbjct: 504 EIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALRLCLSLSNSEISWGTLFQEFAELGD 563
Query: 184 QELILKLLPRIQKSSGRLDTTSVCCILNSC 273
IL L IQ+S G LD + C IL+SC
Sbjct: 564 HLGILNLFHVIQRSGGVLDYPTACLILSSC 593
>gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
Length = 787
Score = 67.8 bits (164), Expect = 2e-09
Identities = 36/90 (40%), Positives = 49/90 (54%)
Frame = +1
Query: 4 EVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVEH 183
E+H +R GYG++ S++ +LI YL QAL LC + +EI W L Q F +
Sbjct: 504 EIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALRLCLSLSNSEISWGTLFQEFAELGD 563
Query: 184 QELILKLLPRIQKSSGRLDTTSVCCILNSC 273
IL L IQ+S G LD + C IL+SC
Sbjct: 564 HLGILNLFHVIQRSGGVLDYPTACLILSSC 593
>gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]
Length = 798
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/90 (35%), Positives = 51/90 (56%)
Frame = +1
Query: 4 EVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVEH 183
E+H +R GYG+N S++ +LI YL + QAL LC + ++ W L+++ +V+H
Sbjct: 517 EIHSNSIRNGYGTNASVLKSLIAFYLRQGRYHQALKLCLALSNRDVSWGTLVESLSQVDH 576
Query: 184 QELILKLLPRIQKSSGRLDTTSVCCILNSC 273
I+ LL IQ+ LD + IL+SC
Sbjct: 577 HVGIVNLLHVIQRCGANLDCHTARLILSSC 606
>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 789
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/90 (38%), Positives = 49/90 (54%)
Frame = +1
Query: 4 EVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVEH 183
E+H +R GYG++ S++ +LI YL QAL LC + EI WD L++ F +
Sbjct: 506 EIHGNSVRNGYGTHASVVKSLISFYLREGQFHQALKLCLSLSNREISWDTLVKEFSQAGD 565
Query: 184 QELILKLLPRIQKSSGRLDTTSVCCILNSC 273
+L L IQ+S G LD + C IL SC
Sbjct: 566 HIGVLNLFHVIQRSGGVLDYPTACHILTSC 595
>gb|EMT02731.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 814
Score = 67.0 bits (162), Expect = 3e-09
Identities = 37/90 (41%), Positives = 52/90 (57%)
Frame = +1
Query: 4 EVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVEH 183
E+ +RTGYG+N S++ +LI YL +QAL LC + EI W+ L++ F + +
Sbjct: 507 EIQGNSIRTGYGTNASVVQSLISFYLREGQFKQALKLCLSLSNREISWEALVKDFAQGDD 566
Query: 184 QELILKLLPRIQKSSGRLDTTSVCCILNSC 273
IL LL IQ+S G LD + ILNSC
Sbjct: 567 HVGILNLLCVIQRSGGVLDYPTSLHILNSC 596
>ref|XP_006647336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Oryza brachyantha]
Length = 791
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/90 (37%), Positives = 49/90 (54%)
Frame = +1
Query: 4 EVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVEH 183
E+H +R GYG++ ++ +LI Y H +AL LC + ++I W L Q F +
Sbjct: 508 EIHSNSIRNGYGTSDPVLRSLISFYFRGGHFHKALHLCLSLSNSQISWGTLFQEFAELGD 567
Query: 184 QELILKLLPRIQKSSGRLDTTSVCCILNSC 273
IL L IQ+SSG LD + C IL+SC
Sbjct: 568 HLGILNLFHAIQRSSGVLDYQTACLILSSC 597
>ref|XP_006424291.1| hypothetical protein CICLE_v10029844mg, partial [Citrus clementina]
gi|557526225|gb|ESR37531.1| hypothetical protein
CICLE_v10029844mg, partial [Citrus clementina]
Length = 422
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +1
Query: 103 ALALCSLIPKAEIPWDLLLQAFKRVEHQELILKLLPRIQKSSGRLDTTSVCCILNSC 273
+L LCSLI EIPW+LLL+A + + E++ +LL RIQ G +D+ S+C ILNSC
Sbjct: 54 SLKLCSLISDVEIPWNLLLKACIKAKDYEMVHELLERIQLCCGFIDSYSICDILNSC 110
>ref|XP_004952633.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Setaria italica]
Length = 798
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/90 (35%), Positives = 47/90 (52%)
Frame = +1
Query: 4 EVHCRILRTGYGSNISIINTLIYLYLEFLHHRQALALCSLIPKAEIPWDLLLQAFKRVEH 183
E+H +R GYGSN SI+ +L+ YL + QAL LC + E+ W L++AF +
Sbjct: 513 EIHSNSIRNGYGSNTSILKSLVNFYLRQGRYHQALKLCLSLSNHEVSWGTLVEAFYQAGD 572
Query: 184 QELILKLLPRIQKSSGRLDTTSVCCILNSC 273
I+ L IQ +D + IL+SC
Sbjct: 573 HVGIVNLFHVIQCCGVEVDHHTARLILSSC 602